RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 DCAF11Q8TEB1 546 aa13.01□□□□□ -0.33
GAPLINC-203ENST00000581029 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
GAPLINC-203ENST00000581029 TMEM131LA2VDJ0 1609 aa13□□□□□ -0.33
GAPLINC-203ENST00000581029 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
GAPLINC-203ENST00000581029 MYOM2P54296 1465 aa13□□□□□ -0.33
GAPLINC-203ENST00000581029 ZFYVE9O95405 1425 aa13□□□□□ -0.33
GAPLINC-203ENST00000581029 UHRF1BP1Q6BDS2 1440 aa13□□□□□ -0.33
GAPLINC-203ENST00000581029 CEBPAP49715 358 aaPredicted RBP13□□□□□ -0.33
GAPLINC-203ENST00000581029 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
GAPLINC-203ENST00000581029 EID1Q9Y6B2 187 aa12.97□□□□□ -0.33
GAPLINC-203ENST00000581029 MYO3AQ8NEV4 1616 aa12.97□□□□□ -0.33
GAPLINC-203ENST00000581029 CEP170BQ9Y4F5 1589 aaPredicted RBP12.96□□□□□ -0.33
GAPLINC-203ENST00000581029 KDM2AQ9Y2K7 1162 aa12.96□□□□□ -0.33
GAPLINC-203ENST00000581029 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
GAPLINC-203ENST00000581029 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.34
GAPLINC-203ENST00000581029 PPLO60437 1756 aa12.95□□□□□ -0.34
GAPLINC-203ENST00000581029 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
GAPLINC-203ENST00000581029 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
GAPLINC-203ENST00000581029 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
GAPLINC-203ENST00000581029 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
GAPLINC-203ENST00000581029 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
GAPLINC-203ENST00000581029 NEXMIFQ5QGS0 1516 aa12.93□□□□□ -0.34
GAPLINC-203ENST00000581029 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
GAPLINC-203ENST00000581029 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
GAPLINC-203ENST00000581029 SLIT1O75093 1534 aa12.93□□□□□ -0.34
GAPLINC-203ENST00000581029 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
GAPLINC-203ENST00000581029 LAMC1P11047 1609 aa12.92□□□□□ -0.34
GAPLINC-203ENST00000581029 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
GAPLINC-203ENST00000581029 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
GAPLINC-203ENST00000581029 MYO5BQ9ULV0 1848 aa12.91□□□□□ -0.34
GAPLINC-203ENST00000581029 ANKLE2Q86XL3 938 aa12.91□□□□□ -0.34
GAPLINC-203ENST00000581029 TXNDC2Q86VQ3 553 aa12.9□□□□□ -0.34
GAPLINC-203ENST00000581029 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
GAPLINC-203ENST00000581029 PIK3C2GO75747 1445 aa12.89□□□□□ -0.35
GAPLINC-203ENST00000581029 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
GAPLINC-203ENST00000581029 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
GAPLINC-203ENST00000581029 SCAF11Q99590 1463 aaKnown RBP12.87□□□□□ -0.35
GAPLINC-203ENST00000581029 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
GAPLINC-203ENST00000581029 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
GAPLINC-203ENST00000581029 BCANQ96GW7 911 aa12.86□□□□□ -0.35
GAPLINC-203ENST00000581029 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
GAPLINC-203ENST00000581029 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
GAPLINC-203ENST00000581029 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
GAPLINC-203ENST00000581029 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
GAPLINC-203ENST00000581029 MED14O60244 1454 aa12.82□□□□□ -0.36
GAPLINC-203ENST00000581029 ALKQ9UM73 1620 aa12.81□□□□□ -0.36
GAPLINC-203ENST00000581029 LTKP29376 864 aa12.81□□□□□ -0.36
GAPLINC-203ENST00000581029 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
GAPLINC-203ENST00000581029 USP47Q96K76 1375 aa12.81□□□□□ -0.36
GAPLINC-203ENST00000581029 POLR1AO95602 1720 aaPredicted RBP12.8□□□□□ -0.36
GAPLINC-203ENST00000581029 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
GAPLINC-203ENST00000581029 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
GAPLINC-203ENST00000581029 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
GAPLINC-203ENST00000581029 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
GAPLINC-203ENST00000581029 NBPF1Q3BBV0 1214 aa12.78□□□□□ -0.36
GAPLINC-203ENST00000581029 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
GAPLINC-203ENST00000581029 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
GAPLINC-203ENST00000581029 LRPPRCP42704 1394 aaKnown RBP12.77□□□□□ -0.37
GAPLINC-203ENST00000581029 ABCC11Q96J66 1382 aa12.77□□□□□ -0.37
GAPLINC-203ENST00000581029 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
GAPLINC-203ENST00000581029 ADGRB1O14514 1584 aa12.77□□□□□ -0.37
GAPLINC-203ENST00000581029 ADAMTS13Q76LX8 1427 aa12.76□□□□□ -0.37
GAPLINC-203ENST00000581029 DLC1Q96QB1 1528 aa12.76□□□□□ -0.37
GAPLINC-203ENST00000581029 NRXN3Q9Y4C0 1643 aa12.76□□□□□ -0.37
GAPLINC-203ENST00000581029 IQGAP1P46940 1657 aa12.76□□□□□ -0.37
GAPLINC-203ENST00000581029 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
GAPLINC-203ENST00000581029 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
GAPLINC-203ENST00000581029 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
GAPLINC-203ENST00000581029 TMF1P82094 1093 aa12.74□□□□□ -0.37
GAPLINC-203ENST00000581029 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
GAPLINC-203ENST00000581029 TECPR2O15040 1411 aa12.73□□□□□ -0.37
GAPLINC-203ENST00000581029 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
GAPLINC-203ENST00000581029 TMEM132EQ6IEE7 984 aa12.73□□□□□ -0.37
GAPLINC-203ENST00000581029 POGKQ9P215 609 aa12.73□□□□□ -0.37
GAPLINC-203ENST00000581029 KNDC1Q76NI1 1749 aa12.73□□□□□ -0.37
GAPLINC-203ENST00000581029 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
GAPLINC-203ENST00000581029 PUS7Q96PZ0 661 aaKnown RBP12.72□□□□□ -0.37
GAPLINC-203ENST00000581029 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
GAPLINC-203ENST00000581029 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
GAPLINC-203ENST00000581029 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
GAPLINC-203ENST00000581029 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
GAPLINC-203ENST00000581029 METP08581 1390 aa12.7□□□□□ -0.38
GAPLINC-203ENST00000581029 KCNA6P17658 529 aa12.7□□□□□ -0.38
GAPLINC-203ENST00000581029 HSPA2P54652 639 aa12.7□□□□□ -0.38
GAPLINC-203ENST00000581029 AMOTL2Q9Y2J4 779 aa12.7□□□□□ -0.38
GAPLINC-203ENST00000581029 CPS1P31327 1500 aa12.7□□□□□ -0.38
GAPLINC-203ENST00000581029 ASXL1Q8IXJ9 1541 aa12.69□□□□□ -0.38
GAPLINC-203ENST00000581029 STK26Q9P289 416 aa12.69□□□□□ -0.38
GAPLINC-203ENST00000581029 ARHGEF28Q8N1W1 1705 aaKnown RBP12.68□□□□□ -0.38
GAPLINC-203ENST00000581029 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
GAPLINC-203ENST00000581029 CHD2O14647 1828 aaKnown RBP12.68□□□□□ -0.38
GAPLINC-203ENST00000581029 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
GAPLINC-203ENST00000581029 KCNA4P22459 653 aa12.67□□□□□ -0.38
GAPLINC-203ENST00000581029 PRAM1Q96QH2 718 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms