RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
KPNB1-210ENST00000580573 MADDQ8WXG6 1647 aa11.49□□□□□ -0.57
KPNB1-210ENST00000580573 KDM5AP29375 1690 aaKnown RBP11.49□□□□□ -0.57
KPNB1-210ENST00000580573 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
KPNB1-210ENST00000580573 ERVK-7P63135 1459 aa11.48□□□□□ -0.57
KPNB1-210ENST00000580573 KIAA1210Q9ULL0 1709 aa11.48□□□□□ -0.57
KPNB1-210ENST00000580573 MYO5BQ9ULV0 1848 aa11.47□□□□□ -0.57
KPNB1-210ENST00000580573 RALGAPBQ86X10 1494 aa11.47□□□□□ -0.57
KPNB1-210ENST00000580573 WASHC2CQ9Y4E1 1318 aa11.47□□□□□ -0.57
KPNB1-210ENST00000580573 GGT6Q6P531 493 aa11.47□□□□□ -0.57
KPNB1-210ENST00000580573 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.57
KPNB1-210ENST00000580573 MYOM2P54296 1465 aa11.46□□□□□ -0.57
KPNB1-210ENST00000580573 ABCB7O75027 752 aa11.46□□□□□ -0.57
KPNB1-210ENST00000580573 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.58
KPNB1-210ENST00000580573 C3P01024 1663 aa11.46□□□□□ -0.58
KPNB1-210ENST00000580573 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
KPNB1-210ENST00000580573 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
KPNB1-210ENST00000580573 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
KPNB1-210ENST00000580573 PRAG1Q86YV5 1406 aa11.44□□□□□ -0.58
KPNB1-210ENST00000580573 NEXMIFQ5QGS0 1516 aa11.42□□□□□ -0.58
KPNB1-210ENST00000580573 NBPF8Q3BBV2 869 aa11.42□□□□□ -0.58
KPNB1-210ENST00000580573 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
KPNB1-210ENST00000580573 GPRASP1Q5JY77 1395 aa11.41□□□□□ -0.58
KPNB1-210ENST00000580573 IQGAP1P46940 1657 aa11.4□□□□□ -0.58
KPNB1-210ENST00000580573 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
KPNB1-210ENST00000580573 DSG3P32926 999 aa11.4□□□□□ -0.58
KPNB1-210ENST00000580573 UBR1Q8IWV7 1749 aa11.39□□□□□ -0.59
KPNB1-210ENST00000580573 SLC52A1Q9NWF4 448 aa11.39□□□□□ -0.59
KPNB1-210ENST00000580573 ZMYM3Q14202 1370 aa11.39□□□□□ -0.59
KPNB1-210ENST00000580573 ZFYVE9O95405 1425 aa11.38□□□□□ -0.59
KPNB1-210ENST00000580573 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
KPNB1-210ENST00000580573 RIMS1Q86UR5 1692 aaKnown RBP11.37□□□□□ -0.59
KPNB1-210ENST00000580573 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
KPNB1-210ENST00000580573 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
KPNB1-210ENST00000580573 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
KPNB1-210ENST00000580573 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
KPNB1-210ENST00000580573 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
KPNB1-210ENST00000580573 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
KPNB1-210ENST00000580573 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
KPNB1-210ENST00000580573 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
KPNB1-210ENST00000580573 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
KPNB1-210ENST00000580573 IDI1Q13907 227 aa11.34□□□□□ -0.59
KPNB1-210ENST00000580573 ADGRB1O14514 1584 aa11.33□□□□□ -0.6
KPNB1-210ENST00000580573 FBXO31Q5XUX0 539 aaPredicted RBP11.33□□□□□ -0.6
KPNB1-210ENST00000580573 TNRQ92752 1358 aa11.32□□□□□ -0.6
KPNB1-210ENST00000580573 MLECQ14165 292 aa11.32□□□□□ -0.6
KPNB1-210ENST00000580573 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
KPNB1-210ENST00000580573 PROM2Q8N271 834 aa11.32□□□□□ -0.6
KPNB1-210ENST00000580573 SETD1BQ9UPS6 1966 aaKnown RBP11.32□□□□□ -0.6
KPNB1-210ENST00000580573 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
KPNB1-210ENST00000580573 NRXN3Q9Y4C0 1643 aa11.31□□□□□ -0.6
KPNB1-210ENST00000580573 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
KPNB1-210ENST00000580573 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
KPNB1-210ENST00000580573 USP47Q96K76 1375 aa11.3□□□□□ -0.6
KPNB1-210ENST00000580573 SLIT1O75093 1534 aa11.3□□□□□ -0.6
KPNB1-210ENST00000580573 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
KPNB1-210ENST00000580573 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
KPNB1-210ENST00000580573 ESF1Q9H501 851 aaKnown RBP11.29□□□□□ -0.6
KPNB1-210ENST00000580573 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
KPNB1-210ENST00000580573 ASXL1Q8IXJ9 1541 aa11.29□□□□□ -0.6
KPNB1-210ENST00000580573 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
KPNB1-210ENST00000580573 SCAF11Q99590 1463 aaKnown RBP11.28□□□□□ -0.6
KPNB1-210ENST00000580573 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
KPNB1-210ENST00000580573 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
KPNB1-210ENST00000580573 ARHGEF28Q8N1W1 1705 aaKnown RBP11.28□□□□□ -0.6
KPNB1-210ENST00000580573 ADGRF5Q8IZF2 1346 aa11.28□□□□□ -0.6
KPNB1-210ENST00000580573 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
KPNB1-210ENST00000580573 KNDC1Q76NI1 1749 aa11.26□□□□□ -0.61
KPNB1-210ENST00000580573 ALKQ9UM73 1620 aa11.25□□□□□ -0.61
KPNB1-210ENST00000580573 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
KPNB1-210ENST00000580573 ZNF326Q5BKZ1 582 aaKnown RBP11.25□□□□□ -0.61
KPNB1-210ENST00000580573 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
KPNB1-210ENST00000580573 RIMS2Q9UQ26 1411 aa11.25□□□□□ -0.61
KPNB1-210ENST00000580573 VGFO15240 615 aaPredicted RBP11.24□□□□□ -0.61
KPNB1-210ENST00000580573 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
KPNB1-210ENST00000580573 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
KPNB1-210ENST00000580573 PTPRMP28827 1452 aa11.24□□□□□ -0.61
KPNB1-210ENST00000580573 SBNO2Q9Y2G9 1366 aa11.23□□□□□ -0.61
KPNB1-210ENST00000580573 QRICH2Q9H0J4 1663 aa11.23□□□□□ -0.61
KPNB1-210ENST00000580573 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
KPNB1-210ENST00000580573 CCDC7Q96M83 1385 aa11.22□□□□□ -0.61
KPNB1-210ENST00000580573 DIP2AQ14689 1571 aa11.21□□□□□ -0.61
KPNB1-210ENST00000580573 DLC1Q96QB1 1528 aa11.21□□□□□ -0.61
KPNB1-210ENST00000580573 MED14O60244 1454 aa11.21□□□□□ -0.61
KPNB1-210ENST00000580573 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
KPNB1-210ENST00000580573 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.61
KPNB1-210ENST00000580573 MYOM1P52179 1685 aa11.2□□□□□ -0.62
KPNB1-210ENST00000580573 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
KPNB1-210ENST00000580573 CEBPAP49715 358 aaPredicted RBP11.2□□□□□ -0.62
KPNB1-210ENST00000580573 CFAP70Q5T0N1 1121 aa11.2□□□□□ -0.62
KPNB1-210ENST00000580573 TESK2Q96S53 571 aa11.2□□□□□ -0.62
KPNB1-210ENST00000580573 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
KPNB1-210ENST00000580573 HIRIP3Q9BW71 556 aaPredicted RBP11.19□□□□□ -0.62
KPNB1-210ENST00000580573 CPS1P31327 1500 aa11.19□□□□□ -0.62
KPNB1-210ENST00000580573 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 PLEKHG1Q9ULL1 1385 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 KIF7Q2M1P5 1343 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
KPNB1-210ENST00000580573 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms