RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
CSNK1D-213ENST00000580446 DIP2AQ14689 1571 aa22.91■■□□□ 1.26
CSNK1D-213ENST00000580446 ATAD2Q6PL18 1390 aa22.9■■□□□ 1.26
CSNK1D-213ENST00000580446 IDI1Q13907 227 aa22.9■■□□□ 1.26
CSNK1D-213ENST00000580446 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
CSNK1D-213ENST00000580446 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
CSNK1D-213ENST00000580446 MAST1Q9Y2H9 1570 aa22.89■■□□□ 1.26
CSNK1D-213ENST00000580446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.255e-7■□□□□ 9.7
CSNK1D-213ENST00000580446 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
CSNK1D-213ENST00000580446 BRINP3Q76B58 766 aa22.87■■□□□ 1.25
CSNK1D-213ENST00000580446 ARHGEF5Q12774 1597 aa22.84■■□□□ 1.25
CSNK1D-213ENST00000580446 ARHGAP31Q2M1Z3 1444 aa22.83■■□□□ 1.25
CSNK1D-213ENST00000580446 EIF2AK4Q9P2K8 1649 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-213ENST00000580446 ADAMTS2O95450 1211 aa22.83■■□□□ 1.25
CSNK1D-213ENST00000580446 ATF3P18847 181 aa22.83■■□□□ 1.25
CSNK1D-213ENST00000580446 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-213ENST00000580446 CADPS2Q86UW7 1296 aa22.8■■□□□ 1.24
CSNK1D-213ENST00000580446 FOXD1Q16676 465 aa22.79■■□□□ 1.24
CSNK1D-213ENST00000580446 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
CSNK1D-213ENST00000580446 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.79■■□□□ 1.24
CSNK1D-213ENST00000580446 C19orf44Q9H6X5 657 aa22.76■■□□□ 1.23
CSNK1D-213ENST00000580446 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
CSNK1D-213ENST00000580446 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
CSNK1D-213ENST00000580446 ASXL1Q8IXJ9 1541 aa22.75■■□□□ 1.23
CSNK1D-213ENST00000580446 PNPLA6Q8IY17 1366 aa22.74■■□□□ 1.23
CSNK1D-213ENST00000580446 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
CSNK1D-213ENST00000580446 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
CSNK1D-213ENST00000580446 EP400Q96L91 3159 aa22.72■■□□□ 1.23
CSNK1D-213ENST00000580446 PLEKHG1Q9ULL1 1385 aa22.72■■□□□ 1.23
CSNK1D-213ENST00000580446 USP21Q9UK80 565 aa22.71■■□□□ 1.23
CSNK1D-213ENST00000580446 DUOX2Q9NRD8 1548 aa22.71■■□□□ 1.23
CSNK1D-213ENST00000580446 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
CSNK1D-213ENST00000580446 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
CSNK1D-213ENST00000580446 NCOA3Q9Y6Q9 1424 aa22.69■■□□□ 1.22
CSNK1D-213ENST00000580446 KIF15Q9NS87 1388 aa22.69■■□□□ 1.22
CSNK1D-213ENST00000580446 DEFB132Q7Z7B7 95 aa22.69■■□□□ 1.22
CSNK1D-213ENST00000580446 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
CSNK1D-213ENST00000580446 LRRC59Q96AG4 307 aaKnown RBP22.68■■□□□ 1.22
CSNK1D-213ENST00000580446 TRPC5Q9UL62 973 aaPredicted RBP22.65■■□□□ 1.22
CSNK1D-213ENST00000580446 TBX22Q9Y458 520 aa22.65■■□□□ 1.22
CSNK1D-213ENST00000580446 PSDA5PKW4 1024 aaPredicted RBP22.64■■□□□ 1.21
CSNK1D-213ENST00000580446 NOS1P29475 1434 aa22.64■■□□□ 1.21
CSNK1D-213ENST00000580446 KANK1Q14678 1352 aa22.63■■□□□ 1.21
CSNK1D-213ENST00000580446 MST1RQ04912 1400 aa22.63■■□□□ 1.21
CSNK1D-213ENST00000580446 ADAMTS13Q76LX8 1427 aa22.63■■□□□ 1.21
CSNK1D-213ENST00000580446 NHSL1Q5SYE7 1610 aa22.62■■□□□ 1.21
CSNK1D-213ENST00000580446 ATRNO75882 1429 aa22.61■■□□□ 1.21
CSNK1D-213ENST00000580446 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
CSNK1D-213ENST00000580446 CCDC125Q86Z20 511 aa22.6■■□□□ 1.21
CSNK1D-213ENST00000580446 AMOTL2Q9Y2J4 779 aa22.6■■□□□ 1.21
CSNK1D-213ENST00000580446 LRP5O75197 1615 aa22.6■■□□□ 1.21
CSNK1D-213ENST00000580446 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
CSNK1D-213ENST00000580446 CHGAP10645 457 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-213ENST00000580446 SLC52A1Q9NWF4 448 aa22.56■■□□□ 1.2
CSNK1D-213ENST00000580446 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
CSNK1D-213ENST00000580446 MYO5BQ9ULV0 1848 aa22.54■■□□□ 1.2
CSNK1D-213ENST00000580446 FNBP4Q8N3X1 1017 aaPredicted RBP22.54■■□□□ 1.2
CSNK1D-213ENST00000580446 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
CSNK1D-213ENST00000580446 GCC2Q8IWJ2 1684 aa22.52■■□□□ 1.2
CSNK1D-213ENST00000580446 DCCP43146 1447 aa22.52■■□□□ 1.2
CSNK1D-213ENST00000580446 HRCP23327 699 aa22.5■■□□□ 1.19
CSNK1D-213ENST00000580446 TRPM2O94759 1503 aa22.5■■□□□ 1.19
CSNK1D-213ENST00000580446 MYOM3Q5VTT5 1437 aa22.49■■□□□ 1.19
CSNK1D-213ENST00000580446 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
CSNK1D-213ENST00000580446 ABCC5O15440 1437 aa22.48■■□□□ 1.19
CSNK1D-213ENST00000580446 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
CSNK1D-213ENST00000580446 TMEM131LA2VDJ0 1609 aa22.48■■□□□ 1.19
CSNK1D-213ENST00000580446 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
CSNK1D-213ENST00000580446 YY1P25490 414 aa22.47■■□□□ 1.19
CSNK1D-213ENST00000580446 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
CSNK1D-213ENST00000580446 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.19
CSNK1D-213ENST00000580446 GJD4Q96KN9 370 aaPredicted RBP22.46■■□□□ 1.19
CSNK1D-213ENST00000580446 SF3B2Q13435 895 aaKnown RBP22.44■■□□□ 1.18
CSNK1D-213ENST00000580446 PTCH1Q13635 1447 aa22.44■■□□□ 1.18
CSNK1D-213ENST00000580446 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
CSNK1D-213ENST00000580446 ORAI2Q96SN7 254 aa22.43■■□□□ 1.18
CSNK1D-213ENST00000580446 C1orf167Q5SNV9 1468 aa22.4■■□□□ 1.18
CSNK1D-213ENST00000580446 ADGRL3Q9HAR2 1447 aa22.4■■□□□ 1.18
CSNK1D-213ENST00000580446 SOS2Q07890 1332 aaPredicted RBP22.39■■□□□ 1.18
CSNK1D-213ENST00000580446 XRN1Q8IZH2 1706 aaKnown RBP22.39■■□□□ 1.17
CSNK1D-213ENST00000580446 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.17
CSNK1D-213ENST00000580446 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
CSNK1D-213ENST00000580446 UNC13BO14795 1591 aa22.37■■□□□ 1.17
CSNK1D-213ENST00000580446 GLI3P10071 1580 aa22.37■■□□□ 1.17
CSNK1D-213ENST00000580446 METP08581 1390 aa22.37■■□□□ 1.17
CSNK1D-213ENST00000580446 R3HDM1Q15032 1099 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-213ENST00000580446 DAPK1P53355 1430 aa22.36■■□□□ 1.17
CSNK1D-213ENST00000580446 MYOM2P54296 1465 aa22.35■■□□□ 1.17
CSNK1D-213ENST00000580446 XPCQ01831 940 aaPredicted RBP22.35■■□□□ 1.17
CSNK1D-213ENST00000580446 NALCNQ8IZF0 1738 aa22.34■■□□□ 1.17
CSNK1D-213ENST00000580446 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
CSNK1D-213ENST00000580446 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
CSNK1D-213ENST00000580446 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
CSNK1D-213ENST00000580446 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
CSNK1D-213ENST00000580446 BRWD3Q6RI45 1802 aa22.29■■□□□ 1.16
CSNK1D-213ENST00000580446 COL22A1Q8NFW1 1626 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-213ENST00000580446 EN1Q05925 392 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-213ENST00000580446 UNC5CLQ8IV45 518 aa22.28■■□□□ 1.16
CSNK1D-213ENST00000580446 BAG6P46379 1132 aa22.27■■□□□ 1.16
CSNK1D-213ENST00000580446 LAMC1P11047 1609 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms