RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ATAD2Q6PL18 1390 aa5.44□□□□□ -1.54
CDH19-204ENST00000579658 CCNB3Q8WWL7 1395 aa5.44□□□□□ -1.54
CDH19-204ENST00000579658 KCNA6P17658 529 aa5.44□□□□□ -1.54
CDH19-204ENST00000579658 CCDC125Q86Z20 511 aa5.44□□□□□ -1.54
CDH19-204ENST00000579658 CCDC141Q6ZP82 1450 aa5.44□□□□□ -1.54
CDH19-204ENST00000579658 TMEM94Q12767 1356 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 ARHGAP31Q2M1Z3 1444 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 NCOA2Q15596 1464 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 ARHGEF5Q12774 1597 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 LRP6O75581 1613 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 MAST1Q9Y2H9 1570 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 MBD5Q9P267 1494 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 HNRNPMP52272 730 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDH19-204ENST00000579658 CFDP1Q9UEE9 299 aaPredicted RBP5.43□□□□□ -1.54
CDH19-204ENST00000579658 TIMELESSQ9UNS1 1208 aa5.43□□□□□ -1.54
CDH19-204ENST00000579658 MROH1Q8NDA8 1641 aa5.42□□□□□ -1.54
CDH19-204ENST00000579658 FBXO31Q5XUX0 539 aaPredicted RBP5.42□□□□□ -1.54
CDH19-204ENST00000579658 CAPN15O75808 1086 aa5.42□□□□□ -1.54
CDH19-204ENST00000579658 ZNF777Q9ULD5 760 aaPredicted RBP5.42□□□□□ -1.54
CDH19-204ENST00000579658 TET3O43151 1660 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 KIF3BO15066 747 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 PIP4P2Q8N4L2 257 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 TRIM52Q96A61 297 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 DAXXQ9UER7 740 aaPredicted RBP5.41□□□□□ -1.54
CDH19-204ENST00000579658 DIP2AQ14689 1571 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 EHBP1L1Q8N3D4 1523 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 RBM6P78332 1123 aaKnown RBP5.41□□□□□ -1.54
CDH19-204ENST00000579658 TPRNQ4KMQ1 711 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 NGLY1Q96IV0 654 aa5.41□□□□□ -1.54
CDH19-204ENST00000579658 CHD2O14647 1828 aaKnown RBP5.41□□□□□ -1.54
CDH19-204ENST00000579658 NHSL1Q5SYE7 1610 aa5.4□□□□□ -1.54
CDH19-204ENST00000579658 EFCAB6Q5THR3 1501 aa5.4□□□□□ -1.54
CDH19-204ENST00000579658 TXNDC2Q86VQ3 553 aa5.4□□□□□ -1.54
CDH19-204ENST00000579658 PROSER2Q86WR7 435 aaPredicted RBP5.4□□□□□ -1.54
CDH19-204ENST00000579658 SLAIN2Q9P270 581 aa5.4□□□□□ -1.54
CDH19-204ENST00000579658 RGS12O14924 1447 aa5.4□□□□□ -1.54
CDH19-204ENST00000579658 TMEM2Q9UHN6 1383 aa5.4□□□□□ -1.55
CDH19-204ENST00000579658 HAP1P54257 671 aaPredicted RBP5.4□□□□□ -1.55
CDH19-204ENST00000579658 BCANQ96GW7 911 aa5.4□□□□□ -1.55
CDH19-204ENST00000579658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.4□□□□□ -1.55
CDH19-204ENST00000579658 PIK3C2BO00750 1634 aa5.4□□□□□ -1.55
CDH19-204ENST00000579658 CEP152O94986 1710 aa5.39□□□□□ -1.55
CDH19-204ENST00000579658 DCCP43146 1447 aa5.39□□□□□ -1.55
CDH19-204ENST00000579658 SETD5Q9C0A6 1442 aa5.39□□□□□ -1.55
CDH19-204ENST00000579658 CEP162Q5TB80 1403 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 ADGRB3O60242 1522 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 SPHKAPQ2M3C7 1700 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 CADPS2Q86UW7 1296 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 PIK3R4Q99570 1358 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 UNC13BO14795 1591 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 SETBP1Q9Y6X0 1596 aa5.38□□□□□ -1.55
CDH19-204ENST00000579658 AFF2P51816 1311 aa5.37□□□□□ -1.55
CDH19-204ENST00000579658 DUOX2Q9NRD8 1548 aa5.37□□□□□ -1.55
CDH19-204ENST00000579658 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.37□□□□□ -1.55
CDH19-204ENST00000579658 LTKP29376 864 aa5.37□□□□□ -1.55
CDH19-204ENST00000579658 MTUS2Q5JR59 1369 aa5.37□□□□□ -1.55
CDH19-204ENST00000579658 LMTK2Q8IWU2 1503 aa5.37□□□□□ -1.55
CDH19-204ENST00000579658 HDGFP51858 240 aaKnown RBP5.36□□□□□ -1.55
CDH19-204ENST00000579658 RBM33Q96EV2 1170 aaKnown RBP5.36□□□□□ -1.55
CDH19-204ENST00000579658 LAMC1P11047 1609 aa5.36□□□□□ -1.55
CDH19-204ENST00000579658 PTCH1Q13635 1447 aa5.36□□□□□ -1.55
CDH19-204ENST00000579658 NUTM2BA6NNL0 878 aaPredicted RBP5.36□□□□□ -1.55
CDH19-204ENST00000579658 NUTM2EB1AL46 878 aaPredicted RBP5.36□□□□□ -1.55
CDH19-204ENST00000579658 NUTM2DQ5VT03 806 aaPredicted RBP5.36□□□□□ -1.55
CDH19-204ENST00000579658 NUTM2AQ8IVF1 878 aaPredicted RBP5.36□□□□□ -1.55
CDH19-204ENST00000579658 PLEKHG1Q9ULL1 1385 aa5.35□□□□□ -1.55
CDH19-204ENST00000579658 TSPY4P0CV99 314 aa5.35□□□□□ -1.55
CDH19-204ENST00000579658 TSPY10P0CW01 314 aa5.35□□□□□ -1.55
CDH19-204ENST00000579658 RPRD2Q5VT52 1461 aaKnown RBP5.35□□□□□ -1.55
CDH19-204ENST00000579658 ASXL1Q8IXJ9 1541 aa5.35□□□□□ -1.55
CDH19-204ENST00000579658 ERBINQ96RT1 1412 aa5.35□□□□□ -1.55
CDH19-204ENST00000579658 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.35□□□□□ -1.55
CDH19-204ENST00000579658 PTPN23Q9H3S7 1636 aa5.35□□□□□ -1.55
CDH19-204ENST00000579658 QTRT2Q9H974 415 aaKnown RBP5.34□□□□□ -1.55
CDH19-204ENST00000579658 KDM2AQ9Y2K7 1162 aa5.34□□□□□ -1.55
CDH19-204ENST00000579658 KANK1Q14678 1352 aa5.34□□□□□ -1.55
CDH19-204ENST00000579658 BLMP54132 1417 aaPredicted RBP5.34□□□□□ -1.55
CDH19-204ENST00000579658 COL22A1Q8NFW1 1626 aaPredicted RBP5.34□□□□□ -1.55
CDH19-204ENST00000579658 TULP1O00294 542 aaPredicted RBP5.34□□□□□ -1.55
CDH19-204ENST00000579658 ATF3P18847 181 aa5.34□□□□□ -1.55
CDH19-204ENST00000579658 LRRC59Q96AG4 307 aaKnown RBP5.34□□□□□ -1.55
CDH19-204ENST00000579658 C19orf44Q9H6X5 657 aa5.34□□□□□ -1.55
CDH19-204ENST00000579658 STAG3Q9UJ98 1225 aa5.34□□□□□ -1.55
CDH19-204ENST00000579658 TRPC5Q9UL62 973 aaPredicted RBP5.34□□□□□ -1.55
CDH19-204ENST00000579658 TRPM2O94759 1503 aa5.34□□□□□ -1.56
CDH19-204ENST00000579658 ATRNO75882 1429 aa5.33□□□□□ -1.56
CDH19-204ENST00000579658 MARF1Q9Y4F3 1742 aaKnown RBP5.33□□□□□ -1.56
CDH19-204ENST00000579658 TBX22Q9Y458 520 aa5.33□□□□□ -1.56
CDH19-204ENST00000579658 CFAP65Q6ZU64 1925 aaKnown RBP5.33□□□□□ -1.56
CDH19-204ENST00000579658 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDH19-204ENST00000579658 SLC52A1Q9NWF4 448 aa5.32□□□□□ -1.56
CDH19-204ENST00000579658 PNPLA6Q8IY17 1366 aa5.32□□□□□ -1.56
CDH19-204ENST00000579658 NOS1P29475 1434 aa5.32□□□□□ -1.56
CDH19-204ENST00000579658 SLC4A2P04920 1241 aa5.31□□□□□ -1.56
CDH19-204ENST00000579658 ZFYVE9O95405 1425 aa5.31□□□□□ -1.56
CDH19-204ENST00000579658 CROCC2H7BZ55 1655 aa5.31□□□□□ -1.56
CDH19-204ENST00000579658 PPP1R15AO75807 674 aaPredicted RBP5.3□□□□□ -1.56
CDH19-204ENST00000579658 GABBR2O75899 941 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 APLP2Q06481 763 aa5.3□□□□□ -1.56
CDH19-204ENST00000579658 SF3B2Q13435 895 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms