RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
PCAT18-201ENST00000579458 MIER1Q8N108 512 aa12.84□□□□□ -0.35
PCAT18-201ENST00000579458 ERCC3P19447 782 aa12.83□□□□□ -0.35
PCAT18-201ENST00000579458 PSME1Q06323 249 aa12.83□□□□□ -0.36
PCAT18-201ENST00000579458 UBA5Q9GZZ9 404 aa12.83□□□□□ -0.36
PCAT18-201ENST00000579458 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
PCAT18-201ENST00000579458 APLP1P51693 650 aa12.82□□□□□ -0.36
PCAT18-201ENST00000579458 CLEC4GQ6UXB4 293 aa12.82□□□□□ -0.36
PCAT18-201ENST00000579458 DNAJC14Q6Y2X3 702 aaPredicted RBP12.82□□□□□ -0.36
PCAT18-201ENST00000579458 FAN1Q9Y2M0 1017 aa12.82□□□□□ -0.36
PCAT18-201ENST00000579458 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
PCAT18-201ENST00000579458 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
PCAT18-201ENST00000579458 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
PCAT18-201ENST00000579458 GIPC2Q8TF65 315 aa12.79□□□□□ -0.36
PCAT18-201ENST00000579458 MAF1Q9H063 256 aa12.79□□□□□ -0.36
PCAT18-201ENST00000579458 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
PCAT18-201ENST00000579458 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
PCAT18-201ENST00000579458 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.36
PCAT18-201ENST00000579458 CHPF2Q9P2E5 772 aa12.77□□□□□ -0.37
PCAT18-201ENST00000579458 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
PCAT18-201ENST00000579458 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
PCAT18-201ENST00000579458 SSFA2P28290 1259 aa12.76□□□□□ -0.37
PCAT18-201ENST00000579458 TBC1D12O60347 775 aa12.76□□□□□ -0.37
PCAT18-201ENST00000579458 RHBDL3P58872 404 aa12.76□□□□□ -0.37
PCAT18-201ENST00000579458 METTL14Q9HCE5 456 aaKnown RBP12.76□□□□□ -0.37
PCAT18-201ENST00000579458 SPACA7Q96KW9 195 aa12.76□□□□□ -0.37
PCAT18-201ENST00000579458 BCL2L13Q9BXK5 485 aa12.76□□□□□ -0.37
PCAT18-201ENST00000579458 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
PCAT18-201ENST00000579458 CCDC184Q52MB2 194 aa12.75□□□□□ -0.37
PCAT18-201ENST00000579458 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
PCAT18-201ENST00000579458 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
PCAT18-201ENST00000579458 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
PCAT18-201ENST00000579458 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
PCAT18-201ENST00000579458 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
PCAT18-201ENST00000579458 POLD1P28340 1107 aa12.74□□□□□ -0.37
PCAT18-201ENST00000579458 TAGLNQ01995 201 aaKnown RBP12.74□□□□□ -0.37
PCAT18-201ENST00000579458 C11orf96Q7Z7L8 435 aa12.74□□□□□ -0.37
PCAT18-201ENST00000579458 PBXIP1Q96AQ6 731 aa12.73□□□□□ -0.37
PCAT18-201ENST00000579458 hCG_2014768A0A024R1R8 64 aa12.73□□□□□ -0.37
PCAT18-201ENST00000579458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
PCAT18-201ENST00000579458 EPB41L2O43491 1005 aaKnown RBP12.73□□□□□ -0.37
PCAT18-201ENST00000579458 GLMNQ92990 594 aa12.73□□□□□ -0.37
PCAT18-201ENST00000579458 TMX4Q9H1E5 349 aaPredicted RBP12.73□□□□□ -0.37
PCAT18-201ENST00000579458 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
PCAT18-201ENST00000579458 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
PCAT18-201ENST00000579458 EGFLAMQ63HQ2 1017 aa12.72□□□□□ -0.37
PCAT18-201ENST00000579458 ARMCX6Q7L4S7 300 aa12.72□□□□□ -0.37
PCAT18-201ENST00000579458 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
PCAT18-201ENST00000579458 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
PCAT18-201ENST00000579458 PDE6BP35913 854 aa12.71□□□□□ -0.37
PCAT18-201ENST00000579458 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.38
PCAT18-201ENST00000579458 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
PCAT18-201ENST00000579458 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
PCAT18-201ENST00000579458 PTPROQ16827 1216 aa12.7□□□□□ -0.38
PCAT18-201ENST00000579458 CCDC181Q5TID7 509 aa12.7□□□□□ -0.38
PCAT18-201ENST00000579458 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCAT18-201ENST00000579458 MAGEC2Q9UBF1 373 aaPredicted RBP12.7□□□□□ -0.38
PCAT18-201ENST00000579458 CLGNO14967 610 aa12.7□□□□□ -0.38
PCAT18-201ENST00000579458 BDNFP23560 247 aa12.7□□□□□ -0.38
PCAT18-201ENST00000579458 GNL3LQ9NVN8 582 aaKnown RBP12.7□□□□□ -0.38
PCAT18-201ENST00000579458 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
PCAT18-201ENST00000579458 SDR16C5Q8N3Y7 309 aa12.69□□□□□ -0.38
PCAT18-201ENST00000579458 G3BP2Q9UN86 482 aaKnown RBP12.69□□□□□ -0.38
PCAT18-201ENST00000579458 WDHD1O75717 1129 aaPredicted RBP12.69□□□□□ -0.38
PCAT18-201ENST00000579458 IGBP1P78318 339 aa12.69□□□□□ -0.38
PCAT18-201ENST00000579458 GET4Q7L5D6 327 aaPredicted RBP12.69□□□□□ -0.38
PCAT18-201ENST00000579458 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
PCAT18-201ENST00000579458 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
PCAT18-201ENST00000579458 ERBB3P21860 1342 aa12.68□□□□□ -0.38
PCAT18-201ENST00000579458 SH3BP1Q9Y3L3 701 aa12.68□□□□□ -0.38
PCAT18-201ENST00000579458 RECKO95980 971 aa12.67□□□□□ -0.38
PCAT18-201ENST00000579458 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
PCAT18-201ENST00000579458 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
PCAT18-201ENST00000579458 GYS2P54840 703 aa12.67□□□□□ -0.38
PCAT18-201ENST00000579458 VRTNQ9H8Y1 702 aa12.67□□□□□ -0.38
PCAT18-201ENST00000579458 ZNF500O60304 480 aaPredicted RBP12.66□□□□□ -0.38
PCAT18-201ENST00000579458 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
PCAT18-201ENST00000579458 CREBRFQ8IUR6 639 aa12.66□□□□□ -0.38
PCAT18-201ENST00000579458 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
PCAT18-201ENST00000579458 MS4A1P11836 297 aa12.66□□□□□ -0.38
PCAT18-201ENST00000579458 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
PCAT18-201ENST00000579458 KCNB2Q92953 911 aa12.65□□□□□ -0.38
PCAT18-201ENST00000579458 PIF1Q9H611 641 aa12.65□□□□□ -0.38
PCAT18-201ENST00000579458 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
PCAT18-201ENST00000579458 CCDC189A1A4V9 331 aa12.65□□□□□ -0.39
PCAT18-201ENST00000579458 EVA1CP58658 441 aa12.65□□□□□ -0.39
PCAT18-201ENST00000579458 C4orf46Q504U0 113 aa12.65□□□□□ -0.39
PCAT18-201ENST00000579458 CCDC102AQ96A19 550 aa12.65□□□□□ -0.39
PCAT18-201ENST00000579458 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
PCAT18-201ENST00000579458 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
PCAT18-201ENST00000579458 TLDC2A0PJX2 215 aa12.63□□□□□ -0.39
PCAT18-201ENST00000579458 EXOC5O00471 708 aa12.63□□□□□ -0.39
PCAT18-201ENST00000579458 CFTRP13569 1480 aa12.63□□□□□ -0.39
PCAT18-201ENST00000579458 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
PCAT18-201ENST00000579458 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
PCAT18-201ENST00000579458 ZNF280DQ6N043 979 aa12.63□□□□□ -0.39
PCAT18-201ENST00000579458 DHX38Q92620 1227 aaKnown RBP12.63□□□□□ -0.39
PCAT18-201ENST00000579458 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
PCAT18-201ENST00000579458 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
PCAT18-201ENST00000579458 TCEAL1Q15170 157 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms