RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 COL16A1Q07092 1604 aaPredicted RBP24.94■■□□□ 1.58
IFT20-209ENST00000579419 CROCC2H7BZ55 1655 aa24.93■■□□□ 1.58
IFT20-209ENST00000579419 CHIC2Q9UKJ5 165 aa24.91■■□□□ 1.58
IFT20-209ENST00000579419 DAPK1P53355 1430 aa24.91■■□□□ 1.58
IFT20-209ENST00000579419 MEX3CQ5U5Q3 659 aaKnown RBP24.9■■□□□ 1.58
IFT20-209ENST00000579419 SPATA31A6Q5VVP1 1343 aa24.88■■□□□ 1.57
IFT20-209ENST00000579419 ZFYVE9O95405 1425 aa24.88■■□□□ 1.57
IFT20-209ENST00000579419 ZNF772Q68DY9 489 aaPredicted RBP24.88■■□□□ 1.57
IFT20-209ENST00000579419 PLEKHG1Q9ULL1 1385 aa24.87■■□□□ 1.57
IFT20-209ENST00000579419 PTPN23Q9H3S7 1636 aa24.86■■□□□ 1.57
IFT20-209ENST00000579419 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
IFT20-209ENST00000579419 FGD6Q6ZV73 1430 aa24.86■■□□□ 1.57
IFT20-209ENST00000579419 RIMS2Q9UQ26 1411 aa24.84■■□□□ 1.57
IFT20-209ENST00000579419 PPP1R15AO75807 674 aaPredicted RBP24.83■■□□□ 1.57
IFT20-209ENST00000579419 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
IFT20-209ENST00000579419 CHD2O14647 1828 aaKnown RBP24.82■■□□□ 1.56
IFT20-209ENST00000579419 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
IFT20-209ENST00000579419 AHDC1Q5TGY3 1603 aaPredicted RBP24.8■■□□□ 1.56
IFT20-209ENST00000579419 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
IFT20-209ENST00000579419 RXRBP28702 533 aa24.8■■□□□ 1.56
IFT20-209ENST00000579419 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
IFT20-209ENST00000579419 TBX22Q9Y458 520 aa24.79■■□□□ 1.56
IFT20-209ENST00000579419 NCOA3Q9Y6Q9 1424 aa24.78■■□□□ 1.56
IFT20-209ENST00000579419 NUTM2BA6NNL0 878 aaPredicted RBP24.78■■□□□ 1.56
IFT20-209ENST00000579419 NUTM2EB1AL46 878 aaPredicted RBP24.78■■□□□ 1.56
IFT20-209ENST00000579419 NUTM2AQ8IVF1 878 aaPredicted RBP24.78■■□□□ 1.56
IFT20-209ENST00000579419 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
IFT20-209ENST00000579419 SHPRHQ149N8 1683 aa24.76■■□□□ 1.55
IFT20-209ENST00000579419 CADPS2Q86UW7 1296 aa24.76■■□□□ 1.55
IFT20-209ENST00000579419 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
IFT20-209ENST00000579419 C19orf44Q9H6X5 657 aa24.75■■□□□ 1.55
IFT20-209ENST00000579419 DIP2AQ14689 1571 aa24.75■■□□□ 1.55
IFT20-209ENST00000579419 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.75■■□□□ 1.55
IFT20-209ENST00000579419 ATF3P18847 181 aa24.74■■□□□ 1.55
IFT20-209ENST00000579419 MYO5BQ9ULV0 1848 aa24.74■■□□□ 1.55
IFT20-209ENST00000579419 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
IFT20-209ENST00000579419 TMEM131LA2VDJ0 1609 aa24.73■■□□□ 1.55
IFT20-209ENST00000579419 CHGAP10645 457 aaKnown RBP24.73■■□□□ 1.55
IFT20-209ENST00000579419 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
IFT20-209ENST00000579419 AFF2P51816 1311 aa24.72■■□□□ 1.55
IFT20-209ENST00000579419 HDGFP51858 240 aaKnown RBP24.71■■□□□ 1.55
IFT20-209ENST00000579419 CDK12Q9NYV4 1490 aaPredicted RBP24.7■■□□□ 1.55
IFT20-209ENST00000579419 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
IFT20-209ENST00000579419 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.68■■□□□ 1.54
IFT20-209ENST00000579419 ADGRL2O95490 1459 aa24.68■■□□□ 1.54
IFT20-209ENST00000579419 AMOTL2Q9Y2J4 779 aa24.67■■□□□ 1.54
IFT20-209ENST00000579419 RGS12O14924 1447 aa24.67■■□□□ 1.54
IFT20-209ENST00000579419 SRCAPQ6ZRS2 3230 aa24.67■■□□□ 1.54
IFT20-209ENST00000579419 ANKRD50Q9ULJ7 1429 aa24.66■■□□□ 1.54
IFT20-209ENST00000579419 PIK3R4Q99570 1358 aa24.65■■□□□ 1.54
IFT20-209ENST00000579419 ASXL1Q8IXJ9 1541 aa24.64■■□□□ 1.53
IFT20-209ENST00000579419 SETD5Q9C0A6 1442 aa24.62■■□□□ 1.53
IFT20-209ENST00000579419 DDX17Q92841 729 aaKnown RBP24.62■■□□□ 1.53
IFT20-209ENST00000579419 C8orf37Q96NL8 207 aa24.62■■□□□ 1.53
IFT20-209ENST00000579419 QTRT2Q9H974 415 aaKnown RBP24.6■■□□□ 1.53
IFT20-209ENST00000579419 MST1RQ04912 1400 aa24.6■■□□□ 1.53
IFT20-209ENST00000579419 APLP2Q06481 763 aa24.59■■□□□ 1.53
IFT20-209ENST00000579419 TRPM2O94759 1503 aa24.59■■□□□ 1.53
IFT20-209ENST00000579419 RBM6P78332 1123 aaKnown RBP24.58■■□□□ 1.53
IFT20-209ENST00000579419 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
IFT20-209ENST00000579419 DCCP43146 1447 aa24.57■■□□□ 1.52
IFT20-209ENST00000579419 PNPLA6Q8IY17 1366 aa24.55■■□□□ 1.52
IFT20-209ENST00000579419 LRRC59Q96AG4 307 aaKnown RBP24.55■■□□□ 1.52
IFT20-209ENST00000579419 UNC13BO14795 1591 aa24.54■■□□□ 1.52
IFT20-209ENST00000579419 NHSL1Q5SYE7 1610 aa24.54■■□□□ 1.52
IFT20-209ENST00000579419 E9PCH4 1651 aa24.53■■□□□ 1.52
IFT20-209ENST00000579419 ADAMTS2O95450 1211 aa24.51■■□□□ 1.51
IFT20-209ENST00000579419 XRN1Q8IZH2 1706 aaKnown RBP24.51■■□□□ 1.51
IFT20-209ENST00000579419 NRXN3Q9Y4C0 1643 aa24.5■■□□□ 1.51
IFT20-209ENST00000579419 METP08581 1390 aa24.49■■□□□ 1.51
IFT20-209ENST00000579419 NGLY1Q96IV0 654 aa24.47■■□□□ 1.51
IFT20-209ENST00000579419 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
IFT20-209ENST00000579419 ATAD2Q6PL18 1390 aa24.44■■□□□ 1.5
IFT20-209ENST00000579419 SETBP1Q9Y6X0 1596 aa24.44■■□□□ 1.5
IFT20-209ENST00000579419 USP21Q9UK80 565 aa24.41■■□□□ 1.5
IFT20-209ENST00000579419 IQGAP3Q86VI3 1631 aa24.41■■□□□ 1.5
IFT20-209ENST00000579419 NUP155O75694 1391 aa24.4■■□□□ 1.5
IFT20-209ENST00000579419 C1orf167Q5SNV9 1468 aa24.39■■□□□ 1.5
IFT20-209ENST00000579419 ZNF326Q5BKZ1 582 aaKnown RBP24.38■■□□□ 1.49
IFT20-209ENST00000579419 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
IFT20-209ENST00000579419 ORAI2Q96SN7 254 aa24.37■■□□□ 1.49
IFT20-209ENST00000579419 ZRANB1Q9UGI0 708 aa24.37■■□□□ 1.49
IFT20-209ENST00000579419 TRPC5Q9UL62 973 aaPredicted RBP24.37■■□□□ 1.49
IFT20-209ENST00000579419 SOS2Q07890 1332 aaPredicted RBP24.35■■□□□ 1.49
IFT20-209ENST00000579419 FNBP4Q8N3X1 1017 aaPredicted RBP24.34■■□□□ 1.49
IFT20-209ENST00000579419 ATRNO75882 1429 aa24.34■■□□□ 1.49
IFT20-209ENST00000579419 ROCK1Q13464 1354 aa24.32■■□□□ 1.48
IFT20-209ENST00000579419 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
IFT20-209ENST00000579419 LAMC1P11047 1609 aa24.3■■□□□ 1.48
IFT20-209ENST00000579419 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
IFT20-209ENST00000579419 EP400Q96L91 3159 aa24.28■■□□□ 1.48
IFT20-209ENST00000579419 NEXMIFQ5QGS0 1516 aa24.28■■□□□ 1.48
IFT20-209ENST00000579419 ITGAEP38570 1179 aa24.25■■□□□ 1.47
IFT20-209ENST00000579419 FOXD1Q16676 465 aa24.25■■□□□ 1.47
IFT20-209ENST00000579419 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
IFT20-209ENST00000579419 SPHKAPQ2M3C7 1700 aa24.24■■□□□ 1.47
IFT20-209ENST00000579419 MYOM2P54296 1465 aa24.24■■□□□ 1.47
IFT20-209ENST00000579419 COL22A1Q8NFW1 1626 aaPredicted RBP24.22■■□□□ 1.47
IFT20-209ENST00000579419 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
IFT20-209ENST00000579419 CCDC125Q86Z20 511 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms