RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 IQGAP3Q86VI3 1631 aa9.64□□□□□ -0.87
TRAF4-213ENST00000578917 SLIT1O75093 1534 aa9.63□□□□□ -0.87
TRAF4-213ENST00000578917 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
TRAF4-213ENST00000578917 TBX22Q9Y458 520 aa9.63□□□□□ -0.87
TRAF4-213ENST00000578917 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
TRAF4-213ENST00000578917 RBM33Q96EV2 1170 aaKnown RBP9.62□□□□□ -0.87
TRAF4-213ENST00000578917 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
TRAF4-213ENST00000578917 PLEKHG1Q9ULL1 1385 aa9.62□□□□□ -0.87
TRAF4-213ENST00000578917 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
TRAF4-213ENST00000578917 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
TRAF4-213ENST00000578917 HRCP23327 699 aa9.61□□□□□ -0.87
TRAF4-213ENST00000578917 NEURL4Q96JN8 1562 aa9.61□□□□□ -0.87
TRAF4-213ENST00000578917 E9PCH4 1651 aa9.61□□□□□ -0.87
TRAF4-213ENST00000578917 GCC2Q8IWJ2 1684 aa9.61□□□□□ -0.87
TRAF4-213ENST00000578917 RPGRIP1LQ68CZ1 1315 aa9.6□□□□□ -0.87
TRAF4-213ENST00000578917 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
TRAF4-213ENST00000578917 CPS1P31327 1500 aa9.6□□□□□ -0.87
TRAF4-213ENST00000578917 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
TRAF4-213ENST00000578917 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
TRAF4-213ENST00000578917 IQGAP1P46940 1657 aa9.58□□□□□ -0.88
TRAF4-213ENST00000578917 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-213ENST00000578917 IQSEC2Q5JU85 1478 aa9.58□□□□□ -0.88
TRAF4-213ENST00000578917 TMEM131LA2VDJ0 1609 aa9.57□□□□□ -0.88
TRAF4-213ENST00000578917 TMEM94Q12767 1356 aa9.57□□□□□ -0.88
TRAF4-213ENST00000578917 ATF3P18847 181 aa9.56□□□□□ -0.88
TRAF4-213ENST00000578917 TRPM2O94759 1503 aa9.56□□□□□ -0.88
TRAF4-213ENST00000578917 KDM5AP29375 1690 aaKnown RBP9.55□□□□□ -0.88
TRAF4-213ENST00000578917 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
TRAF4-213ENST00000578917 KDM2AQ9Y2K7 1162 aa9.55□□□□□ -0.88
TRAF4-213ENST00000578917 LRRC7Q96NW7 1537 aa9.55□□□□□ -0.88
TRAF4-213ENST00000578917 MSH6P52701 1360 aa9.54□□□□□ -0.88
TRAF4-213ENST00000578917 PIK3R4Q99570 1358 aa9.54□□□□□ -0.88
TRAF4-213ENST00000578917 HSPA1LP34931 641 aa9.54□□□□□ -0.88
TRAF4-213ENST00000578917 C19orf44Q9H6X5 657 aa9.54□□□□□ -0.88
TRAF4-213ENST00000578917 SLAIN2Q9P270 581 aa9.54□□□□□ -0.88
TRAF4-213ENST00000578917 STK26Q9P289 416 aa9.54□□□□□ -0.88
TRAF4-213ENST00000578917 DCAF11Q8TEB1 546 aa9.53□□□□□ -0.88
TRAF4-213ENST00000578917 ADGRF5Q8IZF2 1346 aa9.53□□□□□ -0.88
TRAF4-213ENST00000578917 METP08581 1390 aa9.52□□□□□ -0.88
TRAF4-213ENST00000578917 ANKRD30BQ9BXX2 1392 aa9.52□□□□□ -0.88
TRAF4-213ENST00000578917 SPHKAPQ2M3C7 1700 aa9.52□□□□□ -0.89
TRAF4-213ENST00000578917 ADAMTS13Q76LX8 1427 aa9.52□□□□□ -0.89
TRAF4-213ENST00000578917 CADPS2Q86UW7 1296 aa9.52□□□□□ -0.89
TRAF4-213ENST00000578917 CLTCL1P53675 1640 aa9.52□□□□□ -0.89
TRAF4-213ENST00000578917 TMEM132EQ6IEE7 984 aa9.5□□□□□ -0.89
TRAF4-213ENST00000578917 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
TRAF4-213ENST00000578917 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
TRAF4-213ENST00000578917 SPATA31E1Q6ZUB1 1445 aa9.48□□□□□ -0.89
TRAF4-213ENST00000578917 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
TRAF4-213ENST00000578917 STAC3Q96MF2 364 aa9.48□□□□□ -0.89
TRAF4-213ENST00000578917 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
TRAF4-213ENST00000578917 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
TRAF4-213ENST00000578917 MYO5BQ9ULV0 1848 aa9.47□□□□□ -0.89
TRAF4-213ENST00000578917 NEXMIFQ5QGS0 1516 aa9.47□□□□□ -0.89
TRAF4-213ENST00000578917 DIP2AQ14689 1571 aa9.47□□□□□ -0.89
TRAF4-213ENST00000578917 C14orf93Q9H972 538 aaKnown RBP9.47□□□□□ -0.89
TRAF4-213ENST00000578917 POGKQ9P215 609 aa9.47□□□□□ -0.89
TRAF4-213ENST00000578917 DISP3Q9P2K9 1392 aa9.47□□□□□ -0.89
TRAF4-213ENST00000578917 KIF1BO60333 1816 aa9.47□□□□□ -0.89
TRAF4-213ENST00000578917 WAPLQ7Z5K2 1190 aa9.46□□□□□ -0.9
TRAF4-213ENST00000578917 DHX57Q6P158 1386 aaKnown RBP9.46□□□□□ -0.9
TRAF4-213ENST00000578917 FAM135BQ49AJ0 1406 aa9.46□□□□□ -0.9
TRAF4-213ENST00000578917 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.9
TRAF4-213ENST00000578917 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
TRAF4-213ENST00000578917 STRCP1A6NGW2 1772 aa9.45□□□□□ -0.9
TRAF4-213ENST00000578917 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAF4-213ENST00000578917 SIN3AQ96ST3 1273 aa9.44□□□□□ -0.9
TRAF4-213ENST00000578917 ROBO2Q9HCK4 1378 aa9.44□□□□□ -0.9
TRAF4-213ENST00000578917 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
TRAF4-213ENST00000578917 NUTM2FA1L443 756 aa9.43□□□□□ -0.9
TRAF4-213ENST00000578917 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
TRAF4-213ENST00000578917 TRAK1Q9UPV9 953 aa9.43□□□□□ -0.9
TRAF4-213ENST00000578917 NWD1Q149M9 1564 aa9.42□□□□□ -0.9
TRAF4-213ENST00000578917 LRPPRCP42704 1394 aaKnown RBP9.42□□□□□ -0.9
TRAF4-213ENST00000578917 ESCO1Q5FWF5 840 aa9.42□□□□□ -0.9
TRAF4-213ENST00000578917 BRINP3Q76B58 766 aa9.42□□□□□ -0.9
TRAF4-213ENST00000578917 PRAM1Q96QH2 718 aa9.42□□□□□ -0.9
TRAF4-213ENST00000578917 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
TRAF4-213ENST00000578917 ABCC11Q96J66 1382 aa9.41□□□□□ -0.9
TRAF4-213ENST00000578917 CHD2O14647 1828 aaKnown RBP9.41□□□□□ -0.9
TRAF4-213ENST00000578917 SOCS7O14512 581 aa9.41□□□□□ -0.9
TRAF4-213ENST00000578917 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
TRAF4-213ENST00000578917 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
TRAF4-213ENST00000578917 YTHDC2Q9H6S0 1430 aaKnown RBP9.4□□□□□ -0.9
TRAF4-213ENST00000578917 ORAI2Q96SN7 254 aa9.4□□□□□ -0.9
TRAF4-213ENST00000578917 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
TRAF4-213ENST00000578917 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
TRAF4-213ENST00000578917 MEX3CQ5U5Q3 659 aaKnown RBP9.39□□□□□ -0.91
TRAF4-213ENST00000578917 LRRC59Q96AG4 307 aaKnown RBP9.39□□□□□ -0.91
TRAF4-213ENST00000578917 DCCP43146 1447 aa9.39□□□□□ -0.91
TRAF4-213ENST00000578917 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
TRAF4-213ENST00000578917 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-213ENST00000578917 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-213ENST00000578917 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-213ENST00000578917 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
TRAF4-213ENST00000578917 HIRIP3Q9BW71 556 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-213ENST00000578917 MYOM2P54296 1465 aa9.38□□□□□ -0.91
TRAF4-213ENST00000578917 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
TRAF4-213ENST00000578917 FOXO3O43524 673 aa9.37□□□□□ -0.91
TRAF4-213ENST00000578917 PPLO60437 1756 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms