RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 PKDCCQ504Y2 493 aa7.16□□□□□ -1.26
PTPRM-209ENST00000578698 PCDHB3Q9Y5E6 796 aa7.16□□□□□ -1.26
PTPRM-209ENST00000578698 SLC19A1P41440 591 aa7.15□□□□□ -1.26
PTPRM-209ENST00000578698 PRR14Q9BWN1 585 aa7.15□□□□□ -1.26
PTPRM-209ENST00000578698 RNF223E7ERA6 249 aa7.13□□□□□ -1.27
PTPRM-209ENST00000578698 BLOC1S3Q6QNY0 202 aa7.13□□□□□ -1.27
PTPRM-209ENST00000578698 TLL1O43897 1013 aa7.12□□□□□ -1.27
PTPRM-209ENST00000578698 TRIM67Q6ZTA4 783 aa7.12□□□□□ -1.27
PTPRM-209ENST00000578698 TTC13Q8NBP0 860 aa7.12□□□□□ -1.27
PTPRM-209ENST00000578698 ARIH1Q9Y4X5 557 aaPredicted RBP7.11□□□□□ -1.27
PTPRM-209ENST00000578698 DGAT1O75907 488 aa7.1□□□□□ -1.27
PTPRM-209ENST00000578698 MYT1Q01538 1121 aa7.1□□□□□ -1.27
PTPRM-209ENST00000578698 SPRYD7Q5W111 196 aa7.1□□□□□ -1.27
PTPRM-209ENST00000578698 NPDC1Q9NQX5 325 aaPredicted RBP7.1□□□□□ -1.27
PTPRM-209ENST00000578698 FAM187AA6NFU0 413 aa7.09□□□□□ -1.27
PTPRM-209ENST00000578698 PPEF1O14829 653 aaPredicted RBP7.09□□□□□ -1.27
PTPRM-209ENST00000578698 ZNF697Q5TEC3 545 aa7.09□□□□□ -1.27
PTPRM-209ENST00000578698 EYA1Q99502 592 aa7.09□□□□□ -1.27
PTPRM-209ENST00000578698 TNFRSF10AO00220 468 aa7.08□□□□□ -1.28
PTPRM-209ENST00000578698 S1PR4O95977 384 aa7.08□□□□□ -1.28
PTPRM-209ENST00000578698 ZNF598Q86UK7 904 aaKnown RBP7.08□□□□□ -1.28
PTPRM-209ENST00000578698 EMID1Q96A84 441 aaPredicted RBP7.08□□□□□ -1.28
PTPRM-209ENST00000578698 POTECB2RU33 542 aa7.07□□□□□ -1.28
PTPRM-209ENST00000578698 ANKLE1Q8NAG6 615 aa7.07□□□□□ -1.28
PTPRM-209ENST00000578698 DNAJB2P25686 324 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 PRR20EP86478 221 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 PRR20CP86479 221 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 PRR20DP86480 221 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 PRR20BP86481 221 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 PRR20AP86496 221 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 KMT5BQ4FZB7 885 aa7.06□□□□□ -1.28
PTPRM-209ENST00000578698 LIAT1Q6ZQX7 453 aa7.05□□□□□ -1.28
PTPRM-209ENST00000578698 CFHP08603 1231 aa7.04□□□□□ -1.28
PTPRM-209ENST00000578698 RBM46Q8TBY0 533 aaKnown RBP7.04□□□□□ -1.28
PTPRM-209ENST00000578698 ST8SIA5O15466 376 aa7.03□□□□□ -1.28
PTPRM-209ENST00000578698 ACTN4O43707 911 aaKnown RBP7.03□□□□□ -1.28
PTPRM-209ENST00000578698 ADH1BP00325 375 aa7.02□□□□□ -1.29
PTPRM-209ENST00000578698 P3H3Q8IVL6 736 aa7.02□□□□□ -1.29
PTPRM-209ENST00000578698 TMEM134Q9H6X4 195 aa7.02□□□□□ -1.29
PTPRM-209ENST00000578698 TIMELESSQ9UNS1 1208 aa7.02□□□□□ -1.29
PTPRM-209ENST00000578698 GDF9O60383 454 aa7.01□□□□□ -1.29
PTPRM-209ENST00000578698 NR1I2O75469 434 aa7.01□□□□□ -1.29
PTPRM-209ENST00000578698 FOXC1Q12948 553 aa7.01□□□□□ -1.29
PTPRM-209ENST00000578698 SLC6A16Q9GZN6 736 aa7.01□□□□□ -1.29
PTPRM-209ENST00000578698 RCCD1A6NED2 376 aa7□□□□□ -1.29
PTPRM-209ENST00000578698 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
PTPRM-209ENST00000578698 PTGDRQ13258 359 aa6.99□□□□□ -1.29
PTPRM-209ENST00000578698 FAM161AQ3B820 660 aa6.99□□□□□ -1.29
PTPRM-209ENST00000578698 PLA2G2CQ5R387 149 aa6.99□□□□□ -1.29
PTPRM-209ENST00000578698 AAASQ9NRG9 546 aa6.99□□□□□ -1.29
PTPRM-209ENST00000578698 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
PTPRM-209ENST00000578698 TULP1O00294 542 aaPredicted RBP6.98□□□□□ -1.29
PTPRM-209ENST00000578698 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
PTPRM-209ENST00000578698 NUTM2FA1L443 756 aa6.97□□□□□ -1.29
PTPRM-209ENST00000578698 SLC10A3P09131 477 aa6.96□□□□□ -1.3
PTPRM-209ENST00000578698 PUS10Q3MIT2 529 aaKnown RBP6.96□□□□□ -1.3
PTPRM-209ENST00000578698 SCUBE3Q8IX30 993 aa6.95□□□□□ -1.3
PTPRM-209ENST00000578698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.94□□□□□ -1.3
PTPRM-209ENST00000578698 SPSB2Q99619 263 aa6.94□□□□□ -1.3
PTPRM-209ENST00000578698 PKD2L1Q9P0L9 805 aa6.94□□□□□ -1.3
PTPRM-209ENST00000578698 LMOD2Q6P5Q4 547 aa6.93□□□□□ -1.3
PTPRM-209ENST00000578698 CYP4X1Q8N118 509 aa6.93□□□□□ -1.3
PTPRM-209ENST00000578698 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
PTPRM-209ENST00000578698 AXIN1O15169 862 aa6.92□□□□□ -1.3
PTPRM-209ENST00000578698 WFS1O76024 890 aa6.92□□□□□ -1.3
PTPRM-209ENST00000578698 RSPH4AQ5TD94 716 aa6.92□□□□□ -1.3
PTPRM-209ENST00000578698 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
PTPRM-209ENST00000578698 ARHGEF1Q92888 912 aaKnown RBP6.92□□□□□ -1.3
PTPRM-209ENST00000578698 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
PTPRM-209ENST00000578698 C11orf95C9JLR9 678 aaPredicted RBP6.91□□□□□ -1.3
PTPRM-209ENST00000578698 FCHSD2O94868 740 aa6.91□□□□□ -1.3
PTPRM-209ENST00000578698 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
PTPRM-209ENST00000578698 FCF1Q9Y324 198 aaKnown RBP6.91□□□□□ -1.3
PTPRM-209ENST00000578698 RPIAP49247 311 aa6.9□□□□□ -1.3
PTPRM-209ENST00000578698 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
PTPRM-209ENST00000578698 CD2BP2O95400 341 aaKnown RBP6.89□□□□□ -1.31
PTPRM-209ENST00000578698 RDH13Q8NBN7 331 aa6.89□□□□□ -1.31
PTPRM-209ENST00000578698 GTF3C3Q9Y5Q9 886 aa6.89□□□□□ -1.31
PTPRM-209ENST00000578698 OATP04181 439 aa6.88□□□□□ -1.31
PTPRM-209ENST00000578698 PXYLP1Q8TE99 480 aa6.88□□□□□ -1.31
PTPRM-209ENST00000578698 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
PTPRM-209ENST00000578698 TTC24A2A3L6 582 aaPredicted RBP6.87□□□□□ -1.31
PTPRM-209ENST00000578698 AVPP01185 164 aa6.87□□□□□ -1.31
PTPRM-209ENST00000578698 CTC1Q2NKJ3 1217 aa6.87□□□□□ -1.31
PTPRM-209ENST00000578698 ZBTB24O43167 697 aaPredicted RBP6.86□□□□□ -1.31
PTPRM-209ENST00000578698 FMNL1O95466 1100 aaPredicted RBP6.86□□□□□ -1.31
PTPRM-209ENST00000578698 STK17AQ9UEE5 414 aa6.86□□□□□ -1.31
PTPRM-209ENST00000578698 INSM1Q01101 510 aaPredicted RBP6.85□□□□□ -1.31
PTPRM-209ENST00000578698 MORN1Q5T089 497 aa6.85□□□□□ -1.31
PTPRM-209ENST00000578698 METTL3Q86U44 580 aaKnown RBP6.85□□□□□ -1.31
PTPRM-209ENST00000578698 PRDM9Q9NQV7 894 aa6.85□□□□□ -1.31
PTPRM-209ENST00000578698 DDX11L8A8MPP1 907 aa6.84□□□□□ -1.31
PTPRM-209ENST00000578698 FUT2Q10981 343 aa6.84□□□□□ -1.31
PTPRM-209ENST00000578698 NFX1Q12986 1120 aaKnown RBP6.84□□□□□ -1.31
PTPRM-209ENST00000578698 ATP6V1AP38606 617 aa6.83□□□□□ -1.32
PTPRM-209ENST00000578698 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
PTPRM-209ENST00000578698 THAP11Q96EK4 314 aa6.83□□□□□ -1.32
PTPRM-209ENST00000578698 FAM160A2Q8N612 972 aaPredicted RBP6.82□□□□□ -1.32
PTPRM-209ENST00000578698 SLC27A5Q9Y2P5 690 aa6.82□□□□□ -1.32
PTPRM-209ENST00000578698 SEMA3EO15041 775 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms