RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CNTLNQ9NXG0 1405 aa11.13□□□□□ -0.63
SMARCE1-212ENST00000577721 DIP2CQ9Y2E4 1556 aa11.12□□□□□ -0.63
SMARCE1-212ENST00000577721 PTGER2P43116 358 aa11.12□□□□□ -0.63
SMARCE1-212ENST00000577721 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-212ENST00000577721 GGT6Q6P531 493 aa11.12□□□□□ -0.63
SMARCE1-212ENST00000577721 ZMYM3Q14202 1370 aa11.12□□□□□ -0.63
SMARCE1-212ENST00000577721 UBAP1LF5GYI3 381 aa11.11□□□□□ -0.63
SMARCE1-212ENST00000577721 CFDP1Q9UEE9 299 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-212ENST00000577721 CASKIN1Q8WXD9 1431 aa11.1□□□□□ -0.63
SMARCE1-212ENST00000577721 AGLP35573 1532 aa11.1□□□□□ -0.63
SMARCE1-212ENST00000577721 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
SMARCE1-212ENST00000577721 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
SMARCE1-212ENST00000577721 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
SMARCE1-212ENST00000577721 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
SMARCE1-212ENST00000577721 ABCA6Q8N139 1617 aa11.09□□□□□ -0.63
SMARCE1-212ENST00000577721 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
SMARCE1-212ENST00000577721 PKD2Q13563 968 aa11.08□□□□□ -0.64
SMARCE1-212ENST00000577721 ABCC1P33527 1531 aa11.08□□□□□ -0.64
SMARCE1-212ENST00000577721 ZNF335Q9H4Z2 1342 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-212ENST00000577721 SETD1BQ9UPS6 1966 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-212ENST00000577721 NPATQ14207 1427 aa11.07□□□□□ -0.64
SMARCE1-212ENST00000577721 C3P01024 1663 aa11.07□□□□□ -0.64
SMARCE1-212ENST00000577721 CCNB3Q8WWL7 1395 aa11.06□□□□□ -0.64
SMARCE1-212ENST00000577721 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-212ENST00000577721 ZNF687Q8N1G0 1237 aa11.06□□□□□ -0.64
SMARCE1-212ENST00000577721 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
SMARCE1-212ENST00000577721 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
SMARCE1-212ENST00000577721 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
SMARCE1-212ENST00000577721 LTBP4Q8N2S1 1624 aa11.05□□□□□ -0.64
SMARCE1-212ENST00000577721 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-212ENST00000577721 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
SMARCE1-212ENST00000577721 PDAP1Q13442 181 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-212ENST00000577721 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
SMARCE1-212ENST00000577721 A2MP01023 1474 aa11.03□□□□□ -0.64
SMARCE1-212ENST00000577721 IQSEC2Q5JU85 1478 aa11.03□□□□□ -0.64
SMARCE1-212ENST00000577721 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
SMARCE1-212ENST00000577721 KIAA1107Q9UPP5 1409 aa11.02□□□□□ -0.64
SMARCE1-212ENST00000577721 ITSN2Q9NZM3 1697 aa11.02□□□□□ -0.64
SMARCE1-212ENST00000577721 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
SMARCE1-212ENST00000577721 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
SMARCE1-212ENST00000577721 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.65
SMARCE1-212ENST00000577721 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-212ENST00000577721 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 FYCO1Q9BQS8 1478 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 SPATA31D1Q6ZQQ2 1576 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
SMARCE1-212ENST00000577721 KIF3BO15066 747 aa11□□□□□ -0.65
SMARCE1-212ENST00000577721 TOM1O60784 492 aa10.99□□□□□ -0.65
SMARCE1-212ENST00000577721 FBXO31Q5XUX0 539 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-212ENST00000577721 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
SMARCE1-212ENST00000577721 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
SMARCE1-212ENST00000577721 SUPT6HQ7KZ85 1726 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-212ENST00000577721 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
SMARCE1-212ENST00000577721 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
SMARCE1-212ENST00000577721 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
SMARCE1-212ENST00000577721 HSPA1LP34931 641 aa10.97□□□□□ -0.65
SMARCE1-212ENST00000577721 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
SMARCE1-212ENST00000577721 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-212ENST00000577721 PLA2R1Q13018 1463 aa10.97□□□□□ -0.65
SMARCE1-212ENST00000577721 MROH2AA6NES4 1674 aa10.96□□□□□ -0.65
SMARCE1-212ENST00000577721 TNRQ92752 1358 aa10.96□□□□□ -0.65
SMARCE1-212ENST00000577721 THEMISQ8N1K5 641 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-212ENST00000577721 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-212ENST00000577721 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
SMARCE1-212ENST00000577721 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
SMARCE1-212ENST00000577721 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-212ENST00000577721 A2ML1A8K2U0 1454 aa10.94□□□□□ -0.66
SMARCE1-212ENST00000577721 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-212ENST00000577721 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
SMARCE1-212ENST00000577721 RTEL1-TNFRSF6BF6WH68 1400 aa10.93□□□□□ -0.66
SMARCE1-212ENST00000577721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMARCE1-212ENST00000577721 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
SMARCE1-212ENST00000577721 PLXNC1O60486 1568 aa10.92□□□□□ -0.66
SMARCE1-212ENST00000577721 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-212ENST00000577721 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
SMARCE1-212ENST00000577721 FKBP8Q14318 412 aa10.91□□□□□ -0.66
SMARCE1-212ENST00000577721 SHANK2Q9UPX8 1470 aa10.9□□□□□ -0.66
SMARCE1-212ENST00000577721 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
SMARCE1-212ENST00000577721 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
SMARCE1-212ENST00000577721 GPR153Q6NV75 609 aa10.89□□□□□ -0.67
SMARCE1-212ENST00000577721 CEP162Q5TB80 1403 aa10.89□□□□□ -0.67
SMARCE1-212ENST00000577721 DNMT1P26358 1616 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-212ENST00000577721 ZNF142P52746 1687 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-212ENST00000577721 CPS1P31327 1500 aa10.88□□□□□ -0.67
SMARCE1-212ENST00000577721 PZPP20742 1482 aa10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 NPHP4O75161 1426 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 ADGBQ8N7X0 1667 aa10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 EHBP1L1Q8N3D4 1523 aa10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 FAM135AQ9P2D6 1515 aa10.87□□□□□ -0.67
SMARCE1-212ENST00000577721 KDM5DQ9BY66 1539 aa10.85□□□□□ -0.67
SMARCE1-212ENST00000577721 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCE1-212ENST00000577721 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
SMARCE1-212ENST00000577721 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
SMARCE1-212ENST00000577721 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
SMARCE1-212ENST00000577721 UGGT1Q9NYU2 1555 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms