RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 MPHOSPH6Q99547 160 aaKnown RBP7.06□□□□□ -1.28
BRIP1-202ENST00000577598 NUTM2BA6NNL0 878 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 NUTM2EB1AL46 878 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 PPP1R15AO75807 674 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 NUTM2DQ5VT03 806 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 NUTM2AQ8IVF1 878 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 PATL2C9JE40 543 aaKnown RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 FNBP4Q8N3X1 1017 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 RBM33Q96EV2 1170 aaKnown RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 ARIH1Q9Y4X5 557 aaPredicted RBP7.05□□□□□ -1.28
BRIP1-202ENST00000577598 TNNI2P48788 182 aa7.04□□□□□ -1.28
BRIP1-202ENST00000577598 MARSP56192 900 aaKnown RBP7.04□□□□□ -1.28
BRIP1-202ENST00000577598 STK32AQ8WU08 396 aa7.04□□□□□ -1.28
BRIP1-202ENST00000577598 TFIP11Q9UBB9 837 aaKnown RBP7.04□□□□□ -1.28
BRIP1-202ENST00000577598 PAX3P23760 479 aa7.04□□□□□ -1.28
BRIP1-202ENST00000577598 USP5P45974 858 aa7.04□□□□□ -1.28
BRIP1-202ENST00000577598 ANKRD33BA6NCL7 494 aa7.04□□□□□ -1.28
BRIP1-202ENST00000577598 WDR78Q5VTH9 848 aa7.04□□□□□ -1.28
BRIP1-202ENST00000577598 KIF4AO95239 1232 aa7.03□□□□□ -1.28
BRIP1-202ENST00000577598 RIPOR2Q9Y4F9 1068 aa7.03□□□□□ -1.28
BRIP1-202ENST00000577598 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
BRIP1-202ENST00000577598 CAPN10Q9HC96 672 aa7.03□□□□□ -1.28
BRIP1-202ENST00000577598 ZNF594Q96JF6 807 aaPredicted RBP7.02□□□□□ -1.28
BRIP1-202ENST00000577598 MAP2K5Q13163 448 aa7.02□□□□□ -1.29
BRIP1-202ENST00000577598 PIK3R5Q8WYR1 880 aa7.02□□□□□ -1.29
BRIP1-202ENST00000577598 GNPATO15228 680 aa7.02□□□□□ -1.29
BRIP1-202ENST00000577598 SSTR3P32745 418 aaPredicted RBP7.02□□□□□ -1.29
BRIP1-202ENST00000577598 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
BRIP1-202ENST00000577598 LAS1LQ9Y4W2 734 aaKnown RBP7.02□□□□□ -1.29
BRIP1-202ENST00000577598 PALM3A6NDB9 673 aaPredicted RBP7.01□□□□□ -1.29
BRIP1-202ENST00000577598 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
BRIP1-202ENST00000577598 MTMR14Q8NCE2 650 aa7.01□□□□□ -1.29
BRIP1-202ENST00000577598 ADAMTS19Q8TE59 1207 aa7.01□□□□□ -1.29
BRIP1-202ENST00000577598 GPATCH3Q96I76 525 aa7.01□□□□□ -1.29
BRIP1-202ENST00000577598 SLC52A1Q9NWF4 448 aa7.01□□□□□ -1.29
BRIP1-202ENST00000577598 RFC5P40937 340 aa7.01□□□□□ -1.29
BRIP1-202ENST00000577598 TEX2Q8IWB9 1127 aa7.01□□□□□ -1.29
BRIP1-202ENST00000577598 PDE4AP27815 886 aa7□□□□□ -1.29
BRIP1-202ENST00000577598 TSR1Q2NL82 804 aaKnown RBP7□□□□□ -1.29
BRIP1-202ENST00000577598 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
BRIP1-202ENST00000577598 PSEN1P49768 467 aa6.99□□□□□ -1.29
BRIP1-202ENST00000577598 AAMPQ13685 434 aa6.99□□□□□ -1.29
BRIP1-202ENST00000577598 GOLGA2Q08379 1002 aa6.99□□□□□ -1.29
BRIP1-202ENST00000577598 HELBQ8NG08 1087 aaPredicted RBP6.99□□□□□ -1.29
BRIP1-202ENST00000577598 CLK2P49760 499 aaKnown RBP6.98□□□□□ -1.29
BRIP1-202ENST00000577598 PCDHGB7Q9Y5F8 929 aa6.98□□□□□ -1.29
BRIP1-202ENST00000577598 FOXD4Q12950 439 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-202ENST00000577598 QPCTQ16769 361 aa6.98□□□□□ -1.29
BRIP1-202ENST00000577598 TMA7Q9Y2S6 64 aaKnown RBP6.98□□□□□ -1.29
BRIP1-202ENST00000577598 MINK1Q8N4C8 1332 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-202ENST00000577598 IGBP1P78318 339 aa6.98□□□□□ -1.29
BRIP1-202ENST00000577598 BACH2Q9BYV9 841 aa6.98□□□□□ -1.29
BRIP1-202ENST00000577598 WDHD1O75717 1129 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-202ENST00000577598 FAM43BQ6ZT52 329 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-202ENST00000577598 KCNA1Q09470 495 aa6.97□□□□□ -1.29
BRIP1-202ENST00000577598 PPP1R12CQ9BZL4 782 aa6.97□□□□□ -1.29
BRIP1-202ENST00000577598 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
BRIP1-202ENST00000577598 EVA1CP58658 441 aa6.97□□□□□ -1.29
BRIP1-202ENST00000577598 EMILIN3Q9NT22 766 aa6.97□□□□□ -1.29
BRIP1-202ENST00000577598 H3BRB1 525 aa6.96□□□□□ -1.29
BRIP1-202ENST00000577598 PARNO95453 639 aaKnown RBP6.96□□□□□ -1.29
BRIP1-202ENST00000577598 IBSPP21815 317 aaPredicted RBP6.96□□□□□ -1.29
BRIP1-202ENST00000577598 CC2D2BQ6DHV5 1058 aa6.96□□□□□ -1.29
BRIP1-202ENST00000577598 CDCA7Q9BWT1 371 aaPredicted RBP6.96□□□□□ -1.29
BRIP1-202ENST00000577598 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.29
BRIP1-202ENST00000577598 ZBBXA8MT70 800 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 ZC3H6P61129 1189 aaKnown RBP6.96□□□□□ -1.3
BRIP1-202ENST00000577598 CHADLQ6NUI6 762 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 NT5DC4Q86YG4 428 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 UBXN4Q92575 508 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 EVI5LQ96CN4 794 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 PRKAG2Q9UGJ0 569 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 LIMD1Q9UGP4 676 aa6.96□□□□□ -1.3
BRIP1-202ENST00000577598 PDAP1Q13442 181 aaKnown RBP6.96□□□□□ -1.3
BRIP1-202ENST00000577598 MRPL42Q9Y6G3 142 aaKnown RBP6.96□□□□□ -1.3
BRIP1-202ENST00000577598 MAPK8P45983 427 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 PPP1R15BQ5SWA1 713 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 AMOTL2Q9Y2J4 779 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 SBNO2Q9Y2G9 1366 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 MYSM1Q5VVJ2 828 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 PPP4R4Q6NUP7 873 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 MAPK1P28482 360 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
BRIP1-202ENST00000577598 MAP3K9P80192 1104 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 F6X3S4 739 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 SOX12O15370 315 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 HSP90AB4PQ58FF6 505 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 TMEM164Q5U3C3 297 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 SKAP1Q86WV1 359 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 CCDC146Q8IYE0 955 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 PHOX2BQ99453 314 aa6.94□□□□□ -1.3
BRIP1-202ENST00000577598 SPDYE2BA6NHP3 402 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 SPDYE5A6NIY4 337 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 SPDYE6P0CI01 402 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 SPDYE2Q495Y8 402 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 PAF1Q8N7H5 531 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 DYTNA2CJ06 578 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 PRR29P0C7W0 189 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 CFAP70Q5T0N1 1121 aa6.93□□□□□ -1.3
BRIP1-202ENST00000577598 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms