RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
TOP2A-202ENST00000577541 DACH1Q9UI36 760 aa9.3□□□□□ -0.92
TOP2A-202ENST00000577541 INSM1Q01101 510 aaPredicted RBP9.29□□□□□ -0.92
TOP2A-202ENST00000577541 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
TOP2A-202ENST00000577541 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
TOP2A-202ENST00000577541 WIPF1O43516 503 aa9.27□□□□□ -0.93
TOP2A-202ENST00000577541 TLL1O43897 1013 aa9.27□□□□□ -0.93
TOP2A-202ENST00000577541 PDIA6Q15084 440 aa9.27□□□□□ -0.93
TOP2A-202ENST00000577541 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
TOP2A-202ENST00000577541 PRR14Q9BWN1 585 aa9.27□□□□□ -0.93
TOP2A-202ENST00000577541 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
TOP2A-202ENST00000577541 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
TOP2A-202ENST00000577541 LOC100996750A0A140TA64 210 aa9.24□□□□□ -0.93
TOP2A-202ENST00000577541 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
TOP2A-202ENST00000577541 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
TOP2A-202ENST00000577541 KRTAP4-6Q9BYQ5 205 aa9.24□□□□□ -0.93
TOP2A-202ENST00000577541 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
TOP2A-202ENST00000577541 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
TOP2A-202ENST00000577541 NFX1Q12986 1120 aaKnown RBP9.23□□□□□ -0.93
TOP2A-202ENST00000577541 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
TOP2A-202ENST00000577541 S1PR4O95977 384 aa9.22□□□□□ -0.93
TOP2A-202ENST00000577541 TTC13Q8NBP0 860 aa9.22□□□□□ -0.93
TOP2A-202ENST00000577541 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
TOP2A-202ENST00000577541 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
TOP2A-202ENST00000577541 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
TOP2A-202ENST00000577541 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
TOP2A-202ENST00000577541 OSBPP22059 807 aa9.18□□□□□ -0.94
TOP2A-202ENST00000577541 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
TOP2A-202ENST00000577541 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
TOP2A-202ENST00000577541 AVPP01185 164 aa9.17□□□□□ -0.94
TOP2A-202ENST00000577541 FOXC1Q12948 553 aa9.17□□□□□ -0.94
TOP2A-202ENST00000577541 EYA1Q99502 592 aa9.17□□□□□ -0.94
TOP2A-202ENST00000577541 AXIN1O15169 862 aa9.16□□□□□ -0.94
TOP2A-202ENST00000577541 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
TOP2A-202ENST00000577541 ADH1BP00325 375 aa9.12□□□□□ -0.95
TOP2A-202ENST00000577541 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
TOP2A-202ENST00000577541 SLC6A16Q9GZN6 736 aa9.11□□□□□ -0.95
TOP2A-202ENST00000577541 TOR4AQ9NXH8 423 aa9.11□□□□□ -0.95
TOP2A-202ENST00000577541 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
TOP2A-202ENST00000577541 FAM181BA6NEQ2 426 aa9.09□□□□□ -0.95
TOP2A-202ENST00000577541 TERTO14746 1132 aaKnown RBP9.09□□□□□ -0.95
TOP2A-202ENST00000577541 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
TOP2A-202ENST00000577541 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
TOP2A-202ENST00000577541 NR1I2O75469 434 aa9.07□□□□□ -0.96
TOP2A-202ENST00000577541 RPIAP49247 311 aa9.05□□□□□ -0.96
TOP2A-202ENST00000577541 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
TOP2A-202ENST00000577541 SNRPBP14678 240 aaKnown RBP9.04□□□□□ -0.96
TOP2A-202ENST00000577541 CFHP08603 1231 aa9.03□□□□□ -0.96
TOP2A-202ENST00000577541 DNAJB2P25686 324 aa9.03□□□□□ -0.96
TOP2A-202ENST00000577541 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
TOP2A-202ENST00000577541 SLC10A3P09131 477 aa9.02□□□□□ -0.97
TOP2A-202ENST00000577541 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
TOP2A-202ENST00000577541 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
TOP2A-202ENST00000577541 TMEM134Q9H6X4 195 aa9.01□□□□□ -0.97
TOP2A-202ENST00000577541 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
TOP2A-202ENST00000577541 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
TOP2A-202ENST00000577541 E2F4Q16254 413 aa9□□□□□ -0.97
TOP2A-202ENST00000577541 TRIM47Q96LD4 638 aa9□□□□□ -0.97
TOP2A-202ENST00000577541 TTC24A2A3L6 582 aaPredicted RBP8.99□□□□□ -0.97
TOP2A-202ENST00000577541 SPSB2Q99619 263 aa8.99□□□□□ -0.97
TOP2A-202ENST00000577541 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
TOP2A-202ENST00000577541 FAM161AQ3B820 660 aa8.97□□□□□ -0.97
TOP2A-202ENST00000577541 RBM46Q8TBY0 533 aaKnown RBP8.97□□□□□ -0.97
TOP2A-202ENST00000577541 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
TOP2A-202ENST00000577541 ZSCAN1Q8NBB4 408 aa8.96□□□□□ -0.98
TOP2A-202ENST00000577541 SLC16A10Q8TF71 515 aa8.96□□□□□ -0.98
TOP2A-202ENST00000577541 RCCD1A6NED2 376 aa8.94□□□□□ -0.98
TOP2A-202ENST00000577541 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
TOP2A-202ENST00000577541 SMPD1P17405 629 aa8.94□□□□□ -0.98
TOP2A-202ENST00000577541 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
TOP2A-202ENST00000577541 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
TOP2A-202ENST00000577541 ADGRG1Q9Y653 693 aa8.94□□□□□ -0.98
TOP2A-202ENST00000577541 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
TOP2A-202ENST00000577541 GMPRP36959 345 aa8.91□□□□□ -0.98
TOP2A-202ENST00000577541 PTGDRQ13258 359 aa8.89□□□□□ -0.99
TOP2A-202ENST00000577541 FAM160A2Q8N612 972 aaPredicted RBP8.89□□□□□ -0.99
TOP2A-202ENST00000577541 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
TOP2A-202ENST00000577541 WNT7AO00755 349 aa8.88□□□□□ -0.99
TOP2A-202ENST00000577541 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
TOP2A-202ENST00000577541 THAP11Q96EK4 314 aa8.88□□□□□ -0.99
TOP2A-202ENST00000577541 J3QL48 77 aa8.87□□□□□ -0.99
TOP2A-202ENST00000577541 IRF7Q92985 503 aa8.87□□□□□ -0.99
TOP2A-202ENST00000577541 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
TOP2A-202ENST00000577541 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
TOP2A-202ENST00000577541 WDR70Q9NW82 654 aa8.86□□□□□ -0.99
TOP2A-202ENST00000577541 MLLT3P42568 568 aaPredicted RBP8.85□□□□□ -0.99
TOP2A-202ENST00000577541 HPS1Q92902 700 aa8.85□□□□□ -0.99
TOP2A-202ENST00000577541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
TOP2A-202ENST00000577541 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
TOP2A-202ENST00000577541 MRGPRX2Q96LB1 330 aa8.83□□□□□ -1
TOP2A-202ENST00000577541 MORN1Q5T089 497 aa8.82□□□□□ -1
TOP2A-202ENST00000577541 FMNL1O95466 1100 aaPredicted RBP8.81□□□□□ -1
TOP2A-202ENST00000577541 VEGFBP49765 207 aa8.8□□□□□ -1
TOP2A-202ENST00000577541 ERBB4Q15303 1308 aa8.79□□□□□ -1
TOP2A-202ENST00000577541 TRIM32Q13049 653 aa8.78□□□□□ -1
TOP2A-202ENST00000577541 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
TOP2A-202ENST00000577541 H3BM21 787 aa8.77□□□□□ -1.01
TOP2A-202ENST00000577541 FUT2Q10981 343 aa8.77□□□□□ -1.01
TOP2A-202ENST00000577541 PXYLP1Q8TE99 480 aa8.77□□□□□ -1.01
TOP2A-202ENST00000577541 KCTD17Q8N5Z5 321 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms