RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 ZFYVE9O95405 1425 aa21.3■■□□□ 1
IFT20-204ENST00000577498 NEXMIFQ5QGS0 1516 aa21.3■■□□□ 1
IFT20-204ENST00000577498 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
IFT20-204ENST00000577498 HIRIP3Q9BW71 556 aaPredicted RBP21.28■■□□□ 1
IFT20-204ENST00000577498 ADGRF5Q8IZF2 1346 aa21.28■■□□□ 1
IFT20-204ENST00000577498 NBPF1Q3BBV0 1214 aa21.27■■□□□ 1
IFT20-204ENST00000577498 PIK3C2GO75747 1445 aa21.27■■□□□ 1
IFT20-204ENST00000577498 KDM5AP29375 1690 aaKnown RBP21.27■■□□□ 1
IFT20-204ENST00000577498 C3P01024 1663 aa21.26■□□□□ 0.99
IFT20-204ENST00000577498 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
IFT20-204ENST00000577498 MYO5BQ9ULV0 1848 aa21.25■□□□□ 0.99
IFT20-204ENST00000577498 NLRP1Q9C000 1473 aa21.25■□□□□ 0.99
IFT20-204ENST00000577498 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
IFT20-204ENST00000577498 ADAMTSL3P82987 1691 aa21.24■□□□□ 0.99
IFT20-204ENST00000577498 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
IFT20-204ENST00000577498 SCAF11Q99590 1463 aaKnown RBP21.2■□□□□ 0.98
IFT20-204ENST00000577498 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
IFT20-204ENST00000577498 IQGAP1P46940 1657 aa21.2■□□□□ 0.98
IFT20-204ENST00000577498 POLR1AO95602 1720 aaPredicted RBP21.2■□□□□ 0.98
IFT20-204ENST00000577498 CFAP70Q5T0N1 1121 aa21.18■□□□□ 0.98
IFT20-204ENST00000577498 CCDC7Q96M83 1385 aa21.18■□□□□ 0.98
IFT20-204ENST00000577498 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
IFT20-204ENST00000577498 ST20-MTHFSA0A0A6YYL1 179 aa21.17■□□□□ 0.98
IFT20-204ENST00000577498 CEBPAP49715 358 aaPredicted RBP21.17■□□□□ 0.98
IFT20-204ENST00000577498 WASHC2AQ641Q2 1341 aa21.17■□□□□ 0.98
IFT20-204ENST00000577498 RIMS2Q9UQ26 1411 aa21.17■□□□□ 0.98
IFT20-204ENST00000577498 EIF3AQ14152 1382 aaKnown RBP21.16■□□□□ 0.98
IFT20-204ENST00000577498 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.16■□□□□ 0.98
IFT20-204ENST00000577498 UBR1Q8IWV7 1749 aa21.15■□□□□ 0.98
IFT20-204ENST00000577498 HDGFP51858 240 aaKnown RBP21.15■□□□□ 0.98
IFT20-204ENST00000577498 DDX10Q13206 875 aaKnown RBP21.14■□□□□ 0.97
IFT20-204ENST00000577498 ADGRB1O14514 1584 aa21.14■□□□□ 0.97
IFT20-204ENST00000577498 KIF7Q2M1P5 1343 aa21.12■□□□□ 0.97
IFT20-204ENST00000577498 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
IFT20-204ENST00000577498 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
IFT20-204ENST00000577498 NUTM2DQ5VT03 806 aaPredicted RBP21.1■□□□□ 0.97
IFT20-204ENST00000577498 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
IFT20-204ENST00000577498 SLC24A1O60721 1099 aa21.09■□□□□ 0.97
IFT20-204ENST00000577498 TESK2Q96S53 571 aa21.09■□□□□ 0.97
IFT20-204ENST00000577498 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
IFT20-204ENST00000577498 SLIT1O75093 1534 aa21.06■□□□□ 0.96
IFT20-204ENST00000577498 ARHGAP23Q9P227 1491 aa21.06■□□□□ 0.96
IFT20-204ENST00000577498 TMF1P82094 1093 aa21.04■□□□□ 0.96
IFT20-204ENST00000577498 THEMISQ8N1K5 641 aaPredicted RBP21.04■□□□□ 0.96
IFT20-204ENST00000577498 SBNO2Q9Y2G9 1366 aa21.04■□□□□ 0.96
IFT20-204ENST00000577498 CEP170BQ9Y4F5 1589 aaPredicted RBP21.04■□□□□ 0.96
IFT20-204ENST00000577498 ASXL1Q8IXJ9 1541 aa21.04■□□□□ 0.96
IFT20-204ENST00000577498 SETD1BQ9UPS6 1966 aaKnown RBP21.03■□□□□ 0.96
IFT20-204ENST00000577498 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
IFT20-204ENST00000577498 MIER1Q8N108 512 aa21.02■□□□□ 0.96
IFT20-204ENST00000577498 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.95
IFT20-204ENST00000577498 PTPRMP28827 1452 aa21.01■□□□□ 0.95
IFT20-204ENST00000577498 TMEM132EQ6IEE7 984 aa21.01■□□□□ 0.95
IFT20-204ENST00000577498 NRXN3Q9Y4C0 1643 aa21■□□□□ 0.95
IFT20-204ENST00000577498 PLEKHG1Q9ULL1 1385 aa21■□□□□ 0.95
IFT20-204ENST00000577498 CDCA8Q53HL2 280 aa21■□□□□ 0.95
IFT20-204ENST00000577498 EID1Q9Y6B2 187 aa21■□□□□ 0.95
IFT20-204ENST00000577498 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
IFT20-204ENST00000577498 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
IFT20-204ENST00000577498 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
IFT20-204ENST00000577498 YTHDC2Q9H6S0 1430 aaKnown RBP20.98■□□□□ 0.95
IFT20-204ENST00000577498 TRAK1Q9UPV9 953 aa20.98■□□□□ 0.95
IFT20-204ENST00000577498 ARHGEF28Q8N1W1 1705 aaKnown RBP20.97■□□□□ 0.95
IFT20-204ENST00000577498 DLC1Q96QB1 1528 aa20.96■□□□□ 0.95
IFT20-204ENST00000577498 TXNDC2Q86VQ3 553 aa20.96■□□□□ 0.95
IFT20-204ENST00000577498 LRPPRCP42704 1394 aaKnown RBP20.96■□□□□ 0.95
IFT20-204ENST00000577498 LTKP29376 864 aa20.95■□□□□ 0.94
IFT20-204ENST00000577498 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
IFT20-204ENST00000577498 QRICH2Q9H0J4 1663 aa20.93■□□□□ 0.94
IFT20-204ENST00000577498 ANP32CO43423 234 aa20.93■□□□□ 0.94
IFT20-204ENST00000577498 ABCC11Q96J66 1382 aa20.93■□□□□ 0.94
IFT20-204ENST00000577498 ADAMTS13Q76LX8 1427 aa20.92■□□□□ 0.94
IFT20-204ENST00000577498 MED14O60244 1454 aa20.91■□□□□ 0.94
IFT20-204ENST00000577498 DIP2AQ14689 1571 aa20.9■□□□□ 0.94
IFT20-204ENST00000577498 SIRT1Q96EB6 747 aa20.89■□□□□ 0.93
IFT20-204ENST00000577498 TECPR2O15040 1411 aa20.88■□□□□ 0.93
IFT20-204ENST00000577498 METP08581 1390 aa20.88■□□□□ 0.93
IFT20-204ENST00000577498 KNDC1Q76NI1 1749 aa20.88■□□□□ 0.93
IFT20-204ENST00000577498 BCANQ96GW7 911 aa20.88■□□□□ 0.93
IFT20-204ENST00000577498 PUS7Q96PZ0 661 aaKnown RBP20.88■□□□□ 0.93
IFT20-204ENST00000577498 STK26Q9P289 416 aa20.88■□□□□ 0.93
IFT20-204ENST00000577498 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
IFT20-204ENST00000577498 TBX22Q9Y458 520 aa20.86■□□□□ 0.93
IFT20-204ENST00000577498 FAM135BQ49AJ0 1406 aa20.86■□□□□ 0.93
IFT20-204ENST00000577498 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
IFT20-204ENST00000577498 CPS1P31327 1500 aa20.84■□□□□ 0.93
IFT20-204ENST00000577498 EVC2Q86UK5 1308 aa20.84■□□□□ 0.93
IFT20-204ENST00000577498 CCER2I3L3R5 266 aa20.84■□□□□ 0.93
IFT20-204ENST00000577498 POGKQ9P215 609 aa20.84■□□□□ 0.93
IFT20-204ENST00000577498 PRAM1Q96QH2 718 aa20.83■□□□□ 0.93
IFT20-204ENST00000577498 TULP4Q9NRJ4 1543 aa20.81■□□□□ 0.92
IFT20-204ENST00000577498 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
IFT20-204ENST00000577498 MYOM1P52179 1685 aa20.8■□□□□ 0.92
IFT20-204ENST00000577498 KTN1Q86UP2 1357 aaKnown RBP20.78■□□□□ 0.92
IFT20-204ENST00000577498 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
IFT20-204ENST00000577498 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
IFT20-204ENST00000577498 PANK3Q9H999 370 aa20.78■□□□□ 0.92
IFT20-204ENST00000577498 PER1O15534 1290 aaPredicted RBP20.77■□□□□ 0.92
IFT20-204ENST00000577498 SLC26A8Q96RN1 970 aa20.77■□□□□ 0.92
IFT20-204ENST00000577498 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms