RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TSR3Q9UJK0 312 aaKnown RBP5.37□□□□□ -1.55
COPS3-213ENST00000577210 NBPF26B4DH59 902 aa5.36□□□□□ -1.55
COPS3-213ENST00000577210 CLCN1P35523 988 aa5.36□□□□□ -1.55
COPS3-213ENST00000577210 PDE4DQ08499 809 aa5.36□□□□□ -1.55
COPS3-213ENST00000577210 PADI6Q6TGC4 694 aa5.36□□□□□ -1.55
COPS3-213ENST00000577210 TATDN2Q93075 761 aa5.36□□□□□ -1.55
COPS3-213ENST00000577210 PNMA3Q9UL41 463 aa5.36□□□□□ -1.55
COPS3-213ENST00000577210 NYAP1Q6ZVC0 841 aa5.35□□□□□ -1.55
COPS3-213ENST00000577210 NUDT18Q6ZVK8 323 aa5.35□□□□□ -1.55
COPS3-213ENST00000577210 ERICH6Q7L0X2 663 aa5.35□□□□□ -1.55
COPS3-213ENST00000577210 HDGFP51858 240 aaKnown RBP5.34□□□□□ -1.55
COPS3-213ENST00000577210 BRPF1P55201 1214 aaPredicted RBP5.34□□□□□ -1.55
COPS3-213ENST00000577210 TTLL12Q14166 644 aaPredicted RBP5.34□□□□□ -1.55
COPS3-213ENST00000577210 RSPH4AQ5TD94 716 aa5.34□□□□□ -1.55
COPS3-213ENST00000577210 TTC13Q8NBP0 860 aa5.34□□□□□ -1.55
COPS3-213ENST00000577210 DDRGK1Q96HY6 314 aa5.34□□□□□ -1.55
COPS3-213ENST00000577210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.33□□□□□ -1.56
COPS3-213ENST00000577210 RNF40O75150 1001 aa5.33□□□□□ -1.56
COPS3-213ENST00000577210 KCNC4Q03721 635 aa5.33□□□□□ -1.56
COPS3-213ENST00000577210 GPCPD1Q9NPB8 672 aa5.33□□□□□ -1.56
COPS3-213ENST00000577210 PPP4CP60510 307 aa5.32□□□□□ -1.56
COPS3-213ENST00000577210 DIXDC1Q155Q3 683 aa5.32□□□□□ -1.56
COPS3-213ENST00000577210 METTL3Q86U44 580 aaKnown RBP5.32□□□□□ -1.56
COPS3-213ENST00000577210 SULF1Q8IWU6 871 aa5.32□□□□□ -1.56
COPS3-213ENST00000577210 NECTIN2Q92692 538 aa5.32□□□□□ -1.56
COPS3-213ENST00000577210 KDM4CQ9H3R0 1056 aa5.32□□□□□ -1.56
COPS3-213ENST00000577210 ADGRG1Q9Y653 693 aa5.32□□□□□ -1.56
COPS3-213ENST00000577210 TJAP1Q5JTD0 557 aa5.31□□□□□ -1.56
COPS3-213ENST00000577210 PXYLP1Q8TE99 480 aa5.31□□□□□ -1.56
COPS3-213ENST00000577210 FECHP22830 423 aa5.3□□□□□ -1.56
COPS3-213ENST00000577210 DNAJB2P25686 324 aa5.3□□□□□ -1.56
COPS3-213ENST00000577210 APLP1P51693 650 aa5.3□□□□□ -1.56
COPS3-213ENST00000577210 SWT1Q5T5J6 900 aaKnown RBP5.3□□□□□ -1.56
COPS3-213ENST00000577210 Q6ZNB5 142 aa5.3□□□□□ -1.56
COPS3-213ENST00000577210 MTRQ99707 1265 aa5.3□□□□□ -1.56
COPS3-213ENST00000577210 EYA1Q99502 592 aa5.29□□□□□ -1.56
COPS3-213ENST00000577210 RSPH6AQ9H0K4 717 aa5.29□□□□□ -1.56
COPS3-213ENST00000577210 GOPCQ9HD26 462 aa5.29□□□□□ -1.56
COPS3-213ENST00000577210 FAM161AQ3B820 660 aa5.28□□□□□ -1.56
COPS3-213ENST00000577210 GIGYF2Q6Y7W6 1299 aaKnown RBP5.28□□□□□ -1.56
COPS3-213ENST00000577210 PARP9Q8IXQ6 854 aa5.28□□□□□ -1.56
COPS3-213ENST00000577210 ZNF516Q92618 1163 aa5.28□□□□□ -1.56
COPS3-213ENST00000577210 MDM2Q00987 491 aaPredicted RBP5.27□□□□□ -1.57
COPS3-213ENST00000577210 RCCD1A6NED2 376 aa5.26□□□□□ -1.57
COPS3-213ENST00000577210 SSTR3P32745 418 aaPredicted RBP5.26□□□□□ -1.57
COPS3-213ENST00000577210 SLF2Q8IX21 1173 aa5.26□□□□□ -1.57
COPS3-213ENST00000577210 TMUB1Q9BVT8 246 aa5.26□□□□□ -1.57
COPS3-213ENST00000577210 IL21Q9HBE4 155 aa5.26□□□□□ -1.57
COPS3-213ENST00000577210 GPBP1L1Q9HC44 474 aaPredicted RBP5.26□□□□□ -1.57
COPS3-213ENST00000577210 COPS2P61201 443 aa5.25□□□□□ -1.57
COPS3-213ENST00000577210 NKX2-3Q8TAU0 364 aa5.25□□□□□ -1.57
COPS3-213ENST00000577210 PRR14Q9BWN1 585 aa5.25□□□□□ -1.57
COPS3-213ENST00000577210 TMEM134Q9H6X4 195 aa5.25□□□□□ -1.57
COPS3-213ENST00000577210 PPP1R18Q6NYC8 613 aa5.24□□□□□ -1.57
COPS3-213ENST00000577210 FAM217BQ9NTX9 383 aaPredicted RBP5.24□□□□□ -1.57
COPS3-213ENST00000577210 USP46P62068 366 aa5.23□□□□□ -1.57
COPS3-213ENST00000577210 GRIPAP1Q4V328 841 aa5.23□□□□□ -1.57
COPS3-213ENST00000577210 NUTM1Q86Y26 1132 aa5.23□□□□□ -1.57
COPS3-213ENST00000577210 IL27Q8NEV9 243 aa5.23□□□□□ -1.57
COPS3-213ENST00000577210 PCMTD1Q96MG8 357 aaPredicted RBP5.23□□□□□ -1.57
COPS3-213ENST00000577210 TLL1O43897 1013 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 SH3D19Q5HYK7 790 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 BLOC1S3Q6QNY0 202 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 PHOX2BQ99453 314 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 BEGAINQ9BUH8 593 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 FAM117AQ9C073 453 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 GTF3C3Q9Y5Q9 886 aa5.22□□□□□ -1.57
COPS3-213ENST00000577210 GJA5P36382 358 aa5.21□□□□□ -1.58
COPS3-213ENST00000577210 RDH13Q8NBN7 331 aa5.21□□□□□ -1.58
COPS3-213ENST00000577210 PRKD2Q9BZL6 878 aa5.21□□□□□ -1.58
COPS3-213ENST00000577210 PCDHB3Q9Y5E6 796 aa5.21□□□□□ -1.58
COPS3-213ENST00000577210 DDX11L8A8MPP1 907 aa5.2□□□□□ -1.58
COPS3-213ENST00000577210 LCE2BO14633 110 aa5.2□□□□□ -1.58
COPS3-213ENST00000577210 CFHP08603 1231 aa5.2□□□□□ -1.58
COPS3-213ENST00000577210 MS4A1P11836 297 aa5.2□□□□□ -1.58
COPS3-213ENST00000577210 CD46P15529 392 aa5.2□□□□□ -1.58
COPS3-213ENST00000577210 SKIV2LQ15477 1246 aaKnown RBP5.2□□□□□ -1.58
COPS3-213ENST00000577210 KMT5BQ4FZB7 885 aa5.2□□□□□ -1.58
COPS3-213ENST00000577210 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.2□□□□□ -1.58
COPS3-213ENST00000577210 ZPR1O75312 459 aa5.19□□□□□ -1.58
COPS3-213ENST00000577210 SLC10A3P09131 477 aa5.19□□□□□ -1.58
COPS3-213ENST00000577210 TUSC1Q2TAM9 212 aa5.19□□□□□ -1.58
COPS3-213ENST00000577210 REPIN1Q9BWE0 567 aaKnown RBP5.19□□□□□ -1.58
COPS3-213ENST00000577210 NLRP7Q8WX94 980 aa5.18□□□□□ -1.58
COPS3-213ENST00000577210 ATP1B4Q9UN42 357 aaPredicted RBP5.18□□□□□ -1.58
COPS3-213ENST00000577210 PLEKHG3A1L390 1219 aa5.17□□□□□ -1.58
COPS3-213ENST00000577210 ACTN4O43707 911 aaKnown RBP5.17□□□□□ -1.58
COPS3-213ENST00000577210 KDM4AO75164 1064 aa5.17□□□□□ -1.58
COPS3-213ENST00000577210 GCGRP47871 477 aa5.17□□□□□ -1.58
COPS3-213ENST00000577210 LAPTM4AQ15012 233 aa5.17□□□□□ -1.58
COPS3-213ENST00000577210 TRAF7Q6Q0C0 670 aa5.17□□□□□ -1.58
COPS3-213ENST00000577210 EMID1Q96A84 441 aaPredicted RBP5.17□□□□□ -1.58
COPS3-213ENST00000577210 TBC1D2Q9BYX2 928 aa5.17□□□□□ -1.58
COPS3-213ENST00000577210 GFRA3O60609 400 aa5.16□□□□□ -1.58
COPS3-213ENST00000577210 FLIIQ13045 1269 aa5.16□□□□□ -1.58
COPS3-213ENST00000577210 V9GY48 417 aaPredicted RBP5.16□□□□□ -1.58
COPS3-213ENST00000577210 SPDYE5A6NIY4 337 aa5.15□□□□□ -1.59
COPS3-213ENST00000577210 RNF223E7ERA6 249 aa5.15□□□□□ -1.59
COPS3-213ENST00000577210 APBB1O00213 710 aa5.15□□□□□ -1.59
COPS3-213ENST00000577210 S1PR4O95977 384 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms