RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 GOPCQ9HD26 462 aa11.83□□□□□ -0.52
NUP85-204ENST00000577208 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
NUP85-204ENST00000577208 CD46P15529 392 aa11.82□□□□□ -0.52
NUP85-204ENST00000577208 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
NUP85-204ENST00000577208 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
NUP85-204ENST00000577208 ZNF687Q8N1G0 1237 aa11.82□□□□□ -0.52
NUP85-204ENST00000577208 SWT1Q5T5J6 900 aaKnown RBP11.81□□□□□ -0.52
NUP85-204ENST00000577208 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
NUP85-204ENST00000577208 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
NUP85-204ENST00000577208 PBX2P40425 430 aa11.8□□□□□ -0.52
NUP85-204ENST00000577208 NUTM1Q86Y26 1132 aa11.8□□□□□ -0.52
NUP85-204ENST00000577208 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
NUP85-204ENST00000577208 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
NUP85-204ENST00000577208 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
NUP85-204ENST00000577208 RNF40O75150 1001 aa11.78□□□□□ -0.52
NUP85-204ENST00000577208 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
NUP85-204ENST00000577208 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
NUP85-204ENST00000577208 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
NUP85-204ENST00000577208 NDUFV2P19404 249 aa11.75□□□□□ -0.53
NUP85-204ENST00000577208 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
NUP85-204ENST00000577208 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
NUP85-204ENST00000577208 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
NUP85-204ENST00000577208 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
NUP85-204ENST00000577208 RIC3Q7Z5B4 369 aa11.74□□□□□ -0.53
NUP85-204ENST00000577208 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
NUP85-204ENST00000577208 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
NUP85-204ENST00000577208 LCE2DQ5TA82 110 aaPredicted RBP11.73□□□□□ -0.53
NUP85-204ENST00000577208 SLC10A3P09131 477 aa11.72□□□□□ -0.53
NUP85-204ENST00000577208 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
NUP85-204ENST00000577208 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
NUP85-204ENST00000577208 KDM4AO75164 1064 aa11.7□□□□□ -0.54
NUP85-204ENST00000577208 FBXO31Q5XUX0 539 aaPredicted RBP11.7□□□□□ -0.54
NUP85-204ENST00000577208 ANKRD13DQ6ZTN6 518 aa11.7□□□□□ -0.54
NUP85-204ENST00000577208 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
NUP85-204ENST00000577208 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
NUP85-204ENST00000577208 LSM11P83369 360 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP85-204ENST00000577208 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
NUP85-204ENST00000577208 ADGRD1Q6QNK2 874 aa11.69□□□□□ -0.54
NUP85-204ENST00000577208 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP85-204ENST00000577208 GCGRP47871 477 aa11.68□□□□□ -0.54
NUP85-204ENST00000577208 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
NUP85-204ENST00000577208 FLIIQ13045 1269 aa11.67□□□□□ -0.54
NUP85-204ENST00000577208 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
NUP85-204ENST00000577208 HLA-CQ95604 372 aa11.67□□□□□ -0.54
NUP85-204ENST00000577208 ZFRQ96KR1 1074 aaKnown RBP11.67□□□□□ -0.54
NUP85-204ENST00000577208 ZMYND15Q9H091 742 aa11.67□□□□□ -0.54
NUP85-204ENST00000577208 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
NUP85-204ENST00000577208 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
NUP85-204ENST00000577208 SPTLC1O15269 473 aa11.66□□□□□ -0.54
NUP85-204ENST00000577208 CFHP08603 1231 aa11.66□□□□□ -0.54
NUP85-204ENST00000577208 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
NUP85-204ENST00000577208 TK2O00142 265 aa11.65□□□□□ -0.54
NUP85-204ENST00000577208 RFC5P40937 340 aa11.65□□□□□ -0.54
NUP85-204ENST00000577208 QPCTQ16769 361 aa11.65□□□□□ -0.54
NUP85-204ENST00000577208 LAPTM4BQ86VI4 370 aa11.65□□□□□ -0.54
NUP85-204ENST00000577208 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
NUP85-204ENST00000577208 HOXA2O43364 376 aa11.64□□□□□ -0.55
NUP85-204ENST00000577208 GOLGA8CPA6NN73 597 aa11.63□□□□□ -0.55
NUP85-204ENST00000577208 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
NUP85-204ENST00000577208 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
NUP85-204ENST00000577208 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
NUP85-204ENST00000577208 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
NUP85-204ENST00000577208 FDX1P10109 184 aa11.62□□□□□ -0.55
NUP85-204ENST00000577208 MCM6Q14566 821 aa11.62□□□□□ -0.55
NUP85-204ENST00000577208 CLUAP1Q96AJ1 413 aa11.62□□□□□ -0.55
NUP85-204ENST00000577208 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
NUP85-204ENST00000577208 UBTFP17480 764 aaKnown RBP11.61□□□□□ -0.55
NUP85-204ENST00000577208 USP46P62068 366 aa11.61□□□□□ -0.55
NUP85-204ENST00000577208 FUT2Q10981 343 aa11.61□□□□□ -0.55
NUP85-204ENST00000577208 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
NUP85-204ENST00000577208 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
NUP85-204ENST00000577208 SNRKQ9NRH2 765 aa11.59□□□□□ -0.55
NUP85-204ENST00000577208 HRO43593 1189 aa11.58□□□□□ -0.56
NUP85-204ENST00000577208 AP1G2O75843 785 aa11.58□□□□□ -0.56
NUP85-204ENST00000577208 BCAMP50895 628 aa11.58□□□□□ -0.56
NUP85-204ENST00000577208 PCDHGC3Q9UN70 934 aa11.58□□□□□ -0.56
NUP85-204ENST00000577208 ANKK1Q8NFD2 765 aa11.57□□□□□ -0.56
NUP85-204ENST00000577208 TSC1Q92574 1164 aa11.57□□□□□ -0.56
NUP85-204ENST00000577208 LILRB3O75022 631 aa11.56□□□□□ -0.56
NUP85-204ENST00000577208 HRCP23327 699 aa11.56□□□□□ -0.56
NUP85-204ENST00000577208 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
NUP85-204ENST00000577208 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
NUP85-204ENST00000577208 PPP2R2DQ66LE6 453 aa11.56□□□□□ -0.56
NUP85-204ENST00000577208 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
NUP85-204ENST00000577208 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
NUP85-204ENST00000577208 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
NUP85-204ENST00000577208 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
NUP85-204ENST00000577208 POM121Q96HA1 1249 aa11.55□□□□□ -0.56
NUP85-204ENST00000577208 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
NUP85-204ENST00000577208 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
NUP85-204ENST00000577208 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
NUP85-204ENST00000577208 GJA5P36382 358 aa11.53□□□□□ -0.56
NUP85-204ENST00000577208 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
NUP85-204ENST00000577208 WNT2BQ93097 391 aa11.53□□□□□ -0.56
NUP85-204ENST00000577208 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
NUP85-204ENST00000577208 PPP4CP60510 307 aa11.52□□□□□ -0.57
NUP85-204ENST00000577208 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
NUP85-204ENST00000577208 MTMR2Q13614 643 aa11.51□□□□□ -0.57
NUP85-204ENST00000577208 BANK1Q8NDB2 785 aa11.51□□□□□ -0.57
NUP85-204ENST00000577208 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms