RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 PRR20CP86479 221 aa9.51□□□□□ -0.89
CTNS-210ENST00000576979 PRR20DP86480 221 aa9.51□□□□□ -0.89
CTNS-210ENST00000576979 PRR20BP86481 221 aa9.51□□□□□ -0.89
CTNS-210ENST00000576979 PRR20AP86496 221 aa9.51□□□□□ -0.89
CTNS-210ENST00000576979 LIAT1Q6ZQX7 453 aa9.51□□□□□ -0.89
CTNS-210ENST00000576979 ZNF598Q86UK7 904 aaKnown RBP9.51□□□□□ -0.89
CTNS-210ENST00000576979 BLOC1S3Q6QNY0 202 aa9.5□□□□□ -0.89
CTNS-210ENST00000576979 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
CTNS-210ENST00000576979 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
CTNS-210ENST00000576979 SLF2Q8IX21 1173 aa9.48□□□□□ -0.89
CTNS-210ENST00000576979 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
CTNS-210ENST00000576979 SPDYE16A6NNV3 312 aaPredicted RBP9.47□□□□□ -0.89
CTNS-210ENST00000576979 GDF9O60383 454 aa9.47□□□□□ -0.89
CTNS-210ENST00000576979 PADI6Q6TGC4 694 aa9.47□□□□□ -0.89
CTNS-210ENST00000576979 AAASQ9NRG9 546 aa9.47□□□□□ -0.89
CTNS-210ENST00000576979 S1PR4O95977 384 aa9.46□□□□□ -0.9
CTNS-210ENST00000576979 OSBPP22059 807 aa9.46□□□□□ -0.9
CTNS-210ENST00000576979 TTC13Q8NBP0 860 aa9.45□□□□□ -0.9
CTNS-210ENST00000576979 RBM27Q9P2N5 1060 aaKnown RBP9.45□□□□□ -0.9
CTNS-210ENST00000576979 DACH1Q9UI36 760 aa9.45□□□□□ -0.9
CTNS-210ENST00000576979 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
CTNS-210ENST00000576979 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
CTNS-210ENST00000576979 PLA2G2CQ5R387 149 aa9.43□□□□□ -0.9
CTNS-210ENST00000576979 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
CTNS-210ENST00000576979 EYA1Q99502 592 aa9.41□□□□□ -0.9
CTNS-210ENST00000576979 WFS1O76024 890 aa9.38□□□□□ -0.91
CTNS-210ENST00000576979 PRR14Q9BWN1 585 aa9.37□□□□□ -0.91
CTNS-210ENST00000576979 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
CTNS-210ENST00000576979 GMPR2Q9P2T1 348 aaKnown RBP9.37□□□□□ -0.91
CTNS-210ENST00000576979 FOXC1Q12948 553 aa9.36□□□□□ -0.91
CTNS-210ENST00000576979 SLC4A3P48751 1232 aa9.35□□□□□ -0.91
CTNS-210ENST00000576979 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
CTNS-210ENST00000576979 NFX1Q12986 1120 aaKnown RBP9.34□□□□□ -0.91
CTNS-210ENST00000576979 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
CTNS-210ENST00000576979 E2F4Q16254 413 aa9.33□□□□□ -0.92
CTNS-210ENST00000576979 STK17AQ9UEE5 414 aa9.33□□□□□ -0.92
CTNS-210ENST00000576979 ADH1BP00325 375 aa9.32□□□□□ -0.92
CTNS-210ENST00000576979 ABCC9O60706 1549 aa9.31□□□□□ -0.92
CTNS-210ENST00000576979 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
CTNS-210ENST00000576979 ACTN4O43707 911 aaKnown RBP9.31□□□□□ -0.92
CTNS-210ENST00000576979 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
CTNS-210ENST00000576979 ARIH1Q9Y4X5 557 aaPredicted RBP9.31□□□□□ -0.92
CTNS-210ENST00000576979 CFHP08603 1231 aa9.3□□□□□ -0.92
CTNS-210ENST00000576979 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
CTNS-210ENST00000576979 WIPF1O43516 503 aa9.28□□□□□ -0.92
CTNS-210ENST00000576979 AXIN1O15169 862 aa9.27□□□□□ -0.93
CTNS-210ENST00000576979 AVPP01185 164 aa9.27□□□□□ -0.93
CTNS-210ENST00000576979 DNAJB2P25686 324 aa9.27□□□□□ -0.93
CTNS-210ENST00000576979 KMT5BQ4FZB7 885 aa9.27□□□□□ -0.93
CTNS-210ENST00000576979 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
CTNS-210ENST00000576979 TOR4AQ9NXH8 423 aa9.27□□□□□ -0.93
CTNS-210ENST00000576979 SLC10A3P09131 477 aa9.26□□□□□ -0.93
CTNS-210ENST00000576979 FAM161AQ3B820 660 aa9.26□□□□□ -0.93
CTNS-210ENST00000576979 SCRIBQ14160 1630 aa9.25□□□□□ -0.93
CTNS-210ENST00000576979 INSM1Q01101 510 aaPredicted RBP9.24□□□□□ -0.93
CTNS-210ENST00000576979 NR1I2O75469 434 aa9.23□□□□□ -0.93
CTNS-210ENST00000576979 PUS10Q3MIT2 529 aaKnown RBP9.23□□□□□ -0.93
CTNS-210ENST00000576979 LMOD2Q6P5Q4 547 aa9.23□□□□□ -0.93
CTNS-210ENST00000576979 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
CTNS-210ENST00000576979 SNRPBP14678 240 aaKnown RBP9.22□□□□□ -0.93
CTNS-210ENST00000576979 SCUBE3Q8IX30 993 aa9.22□□□□□ -0.93
CTNS-210ENST00000576979 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
CTNS-210ENST00000576979 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
CTNS-210ENST00000576979 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
CTNS-210ENST00000576979 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
CTNS-210ENST00000576979 SMCPP49901 116 aaPredicted RBP9.19□□□□□ -0.94
CTNS-210ENST00000576979 CTC1Q2NKJ3 1217 aa9.19□□□□□ -0.94
CTNS-210ENST00000576979 RBM46Q8TBY0 533 aaKnown RBP9.19□□□□□ -0.94
CTNS-210ENST00000576979 SPSB2Q99619 263 aa9.19□□□□□ -0.94
CTNS-210ENST00000576979 HRCP23327 699 aa9.18□□□□□ -0.94
CTNS-210ENST00000576979 FCF1Q9Y324 198 aaKnown RBP9.18□□□□□ -0.94
CTNS-210ENST00000576979 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
CTNS-210ENST00000576979 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
CTNS-210ENST00000576979 RPIAP49247 311 aa9.17□□□□□ -0.94
CTNS-210ENST00000576979 PTGDRQ13258 359 aa9.17□□□□□ -0.94
CTNS-210ENST00000576979 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
CTNS-210ENST00000576979 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
CTNS-210ENST00000576979 NACADO15069 1562 aa9.16□□□□□ -0.94
CTNS-210ENST00000576979 PLCB2Q00722 1185 aa9.15□□□□□ -0.94
CTNS-210ENST00000576979 TTC24A2A3L6 582 aaPredicted RBP9.14□□□□□ -0.95
CTNS-210ENST00000576979 RB1CC1Q8TDY2 1594 aa9.13□□□□□ -0.95
CTNS-210ENST00000576979 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
CTNS-210ENST00000576979 SMPD1P17405 629 aa9.13□□□□□ -0.95
CTNS-210ENST00000576979 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
CTNS-210ENST00000576979 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
CTNS-210ENST00000576979 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
CTNS-210ENST00000576979 TRIM47Q96LD4 638 aa9.11□□□□□ -0.95
CTNS-210ENST00000576979 PCGF6Q9BYE7 350 aa9.11□□□□□ -0.95
CTNS-210ENST00000576979 RSF1Q96T23 1441 aaPredicted RBP9.11□□□□□ -0.95
CTNS-210ENST00000576979 THAP11Q96EK4 314 aa9.09□□□□□ -0.95
CTNS-210ENST00000576979 J3QL48 77 aa9.08□□□□□ -0.96
CTNS-210ENST00000576979 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
CTNS-210ENST00000576979 BCANQ96GW7 911 aa9.08□□□□□ -0.96
CTNS-210ENST00000576979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
CTNS-210ENST00000576979 MORN1Q5T089 497 aa9.07□□□□□ -0.96
CTNS-210ENST00000576979 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
CTNS-210ENST00000576979 SNIP1Q8TAD8 396 aaKnown RBP9.05□□□□□ -0.96
CTNS-210ENST00000576979 HPS1Q92902 700 aa9.05□□□□□ -0.96
CTNS-210ENST00000576979 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
CTNS-210ENST00000576979 WNT7AO00755 349 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms