RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 PACS2Q86VP3 889 aa10□□□□□ -0.81
TOM1L1-218ENST00000574653 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
TOM1L1-218ENST00000574653 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
TOM1L1-218ENST00000574653 HCSTQ9UBK5 93 aa10□□□□□ -0.81
TOM1L1-218ENST00000574653 PNMA3Q9UL41 463 aa10□□□□□ -0.81
TOM1L1-218ENST00000574653 AXIN2Q9Y2T1 843 aa10□□□□□ -0.81
TOM1L1-218ENST00000574653 DNAJB2P25686 324 aa9.99□□□□□ -0.81
TOM1L1-218ENST00000574653 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
TOM1L1-218ENST00000574653 TMEM134Q9H6X4 195 aa9.99□□□□□ -0.81
TOM1L1-218ENST00000574653 CD46P15529 392 aa9.98□□□□□ -0.81
TOM1L1-218ENST00000574653 PSEN2P49810 448 aa9.97□□□□□ -0.81
TOM1L1-218ENST00000574653 SMAPO00193 183 aa9.96□□□□□ -0.82
TOM1L1-218ENST00000574653 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
TOM1L1-218ENST00000574653 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
TOM1L1-218ENST00000574653 SLC4A5Q9BY07 1137 aa9.96□□□□□ -0.82
TOM1L1-218ENST00000574653 TBC1D2Q9BYX2 928 aa9.96□□□□□ -0.82
TOM1L1-218ENST00000574653 ARHGAP33O14559 1287 aa9.95□□□□□ -0.82
TOM1L1-218ENST00000574653 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
TOM1L1-218ENST00000574653 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
TOM1L1-218ENST00000574653 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
TOM1L1-218ENST00000574653 SULF1Q8IWU6 871 aa9.94□□□□□ -0.82
TOM1L1-218ENST00000574653 FLIIQ13045 1269 aa9.93□□□□□ -0.82
TOM1L1-218ENST00000574653 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
TOM1L1-218ENST00000574653 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
TOM1L1-218ENST00000574653 SPIRE2Q8WWL2 714 aa9.93□□□□□ -0.82
TOM1L1-218ENST00000574653 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
TOM1L1-218ENST00000574653 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
TOM1L1-218ENST00000574653 CLK2P49760 499 aaKnown RBP9.92□□□□□ -0.82
TOM1L1-218ENST00000574653 RABGEF1Q9UJ41 708 aa9.92□□□□□ -0.82
TOM1L1-218ENST00000574653 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
TOM1L1-218ENST00000574653 TK2O00142 265 aa9.9□□□□□ -0.82
TOM1L1-218ENST00000574653 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
TOM1L1-218ENST00000574653 HRO43593 1189 aa9.89□□□□□ -0.83
TOM1L1-218ENST00000574653 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
TOM1L1-218ENST00000574653 TUSC1Q2TAM9 212 aa9.88□□□□□ -0.83
TOM1L1-218ENST00000574653 VPS9D1Q9Y2B5 631 aa9.88□□□□□ -0.83
TOM1L1-218ENST00000574653 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-218ENST00000574653 SPTLC1O15269 473 aa9.87□□□□□ -0.83
TOM1L1-218ENST00000574653 MCM6Q14566 821 aa9.87□□□□□ -0.83
TOM1L1-218ENST00000574653 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
TOM1L1-218ENST00000574653 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
TOM1L1-218ENST00000574653 SEPT9Q9UHD8 586 aaPredicted RBP9.86□□□□□ -0.83
TOM1L1-218ENST00000574653 MOXD2PA6NHM9 499 aa9.85□□□□□ -0.83
TOM1L1-218ENST00000574653 SLC10A3P09131 477 aa9.85□□□□□ -0.83
TOM1L1-218ENST00000574653 GJA5P36382 358 aa9.85□□□□□ -0.83
TOM1L1-218ENST00000574653 SWT1Q5T5J6 900 aaKnown RBP9.85□□□□□ -0.83
TOM1L1-218ENST00000574653 PPP2R2DQ66LE6 453 aa9.85□□□□□ -0.83
TOM1L1-218ENST00000574653 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
TOM1L1-218ENST00000574653 BHMG1C9JSJ3 638 aaPredicted RBP9.84□□□□□ -0.83
TOM1L1-218ENST00000574653 GCGRP47871 477 aa9.84□□□□□ -0.83
TOM1L1-218ENST00000574653 FAM98CQ17RN3 349 aaKnown RBP9.84□□□□□ -0.83
TOM1L1-218ENST00000574653 RDH13Q8NBN7 331 aa9.84□□□□□ -0.83
TOM1L1-218ENST00000574653 RFC5P40937 340 aa9.83□□□□□ -0.84
TOM1L1-218ENST00000574653 KDM4AO75164 1064 aa9.82□□□□□ -0.84
TOM1L1-218ENST00000574653 LAPTM4BQ86VI4 370 aa9.82□□□□□ -0.84
TOM1L1-218ENST00000574653 NDUFV2P19404 249 aa9.81□□□□□ -0.84
TOM1L1-218ENST00000574653 A6NJR5 290 aa9.8□□□□□ -0.84
TOM1L1-218ENST00000574653 USP46P62068 366 aa9.8□□□□□ -0.84
TOM1L1-218ENST00000574653 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
TOM1L1-218ENST00000574653 PCDHB15Q9Y5E8 787 aa9.8□□□□□ -0.84
TOM1L1-218ENST00000574653 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 HOXA2O43364 376 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 LILRB3O75022 631 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 QPCTQ16769 361 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 BANK1Q8NDB2 785 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
TOM1L1-218ENST00000574653 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
TOM1L1-218ENST00000574653 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
TOM1L1-218ENST00000574653 KCTD12Q96CX2 325 aaKnown RBP9.78□□□□□ -0.84
TOM1L1-218ENST00000574653 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
TOM1L1-218ENST00000574653 TMEM259Q4ZIN3 620 aa9.77□□□□□ -0.85
TOM1L1-218ENST00000574653 ARXQ96QS3 562 aa9.77□□□□□ -0.85
TOM1L1-218ENST00000574653 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
TOM1L1-218ENST00000574653 PRPF38BQ5VTL8 546 aaKnown RBP9.76□□□□□ -0.85
TOM1L1-218ENST00000574653 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
TOM1L1-218ENST00000574653 HDGFP51858 240 aaKnown RBP9.75□□□□□ -0.85
TOM1L1-218ENST00000574653 RTL5Q5HYW3 569 aaPredicted RBP9.75□□□□□ -0.85
TOM1L1-218ENST00000574653 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
TOM1L1-218ENST00000574653 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
TOM1L1-218ENST00000574653 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
TOM1L1-218ENST00000574653 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
TOM1L1-218ENST00000574653 FDX1P10109 184 aa9.74□□□□□ -0.85
TOM1L1-218ENST00000574653 HLA-CQ95604 372 aa9.74□□□□□ -0.85
TOM1L1-218ENST00000574653 POM121Q96HA1 1249 aa9.74□□□□□ -0.85
TOM1L1-218ENST00000574653 RGS20O76081 388 aa9.73□□□□□ -0.85
TOM1L1-218ENST00000574653 CFHP08603 1231 aa9.73□□□□□ -0.85
TOM1L1-218ENST00000574653 HRCP23327 699 aa9.73□□□□□ -0.85
TOM1L1-218ENST00000574653 GUCA2AQ02747 115 aa9.73□□□□□ -0.85
TOM1L1-218ENST00000574653 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
TOM1L1-218ENST00000574653 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
TOM1L1-218ENST00000574653 SOCS7O14512 581 aa9.72□□□□□ -0.85
TOM1L1-218ENST00000574653 TRAK2O60296 914 aa9.72□□□□□ -0.85
TOM1L1-218ENST00000574653 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
TOM1L1-218ENST00000574653 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
TOM1L1-218ENST00000574653 STAC3Q96MF2 364 aa9.72□□□□□ -0.85
TOM1L1-218ENST00000574653 FUT2Q10981 343 aa9.71□□□□□ -0.86
TOM1L1-218ENST00000574653 FNBP4Q8N3X1 1017 aaPredicted RBP9.71□□□□□ -0.86
TOM1L1-218ENST00000574653 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.86
TOM1L1-218ENST00000574653 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms