RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 ABCA9Q8IUA7 1624 aa10.05□□□□□ -0.8
RPA1-207ENST00000574049 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
RPA1-207ENST00000574049 TMF1P82094 1093 aa10.03□□□□□ -0.8
RPA1-207ENST00000574049 PPM1GO15355 546 aaPredicted RBP10.03□□□□□ -0.8
RPA1-207ENST00000574049 COL17A1Q9UMD9 1497 aaPredicted RBP10.03□□□□□ -0.8
RPA1-207ENST00000574049 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.8
RPA1-207ENST00000574049 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.8
RPA1-207ENST00000574049 SLC26A8Q96RN1 970 aa10.02□□□□□ -0.8
RPA1-207ENST00000574049 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
RPA1-207ENST00000574049 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
RPA1-207ENST00000574049 SLC52A1Q9NWF4 448 aa10.01□□□□□ -0.81
RPA1-207ENST00000574049 ZFYVE16Q7Z3T8 1539 aa10.01□□□□□ -0.81
RPA1-207ENST00000574049 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPA1-207ENST00000574049 ADGBQ8N7X0 1667 aa10□□□□□ -0.81
RPA1-207ENST00000574049 TXNDC2Q86VQ3 553 aa10□□□□□ -0.81
RPA1-207ENST00000574049 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
RPA1-207ENST00000574049 ATP10AO60312 1499 aa10□□□□□ -0.81
RPA1-207ENST00000574049 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
RPA1-207ENST00000574049 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 UGGT1Q9NYU2 1555 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 PLA2R1Q13018 1463 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 KNSTRNQ9Y448 316 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 NOS1P29475 1434 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 NPATQ14207 1427 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
RPA1-207ENST00000574049 PANK3Q9H999 370 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 ZMYM3Q14202 1370 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 ZBTB7CA1YPR0 619 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 DIP2BQ9P265 1576 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 CCDC7Q96M83 1385 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 ARAP3Q8WWN8 1544 aa9.96□□□□□ -0.81
RPA1-207ENST00000574049 SOX12O15370 315 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.82
RPA1-207ENST00000574049 NEFMP07197 916 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 WAPLQ7Z5K2 1190 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 CABP2Q9NPB3 220 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 RGS3P49796 1198 aa9.95□□□□□ -0.82
RPA1-207ENST00000574049 CROCC2H7BZ55 1655 aa9.95□□□□□ -0.82
RPA1-207ENST00000574049 PRAM1Q96QH2 718 aa9.95□□□□□ -0.82
RPA1-207ENST00000574049 HECW2Q9P2P5 1572 aa9.94□□□□□ -0.82
RPA1-207ENST00000574049 CDCA8Q53HL2 280 aa9.94□□□□□ -0.82
RPA1-207ENST00000574049 CENPJQ9HC77 1338 aaPredicted RBP9.94□□□□□ -0.82
RPA1-207ENST00000574049 MAST1Q9Y2H9 1570 aa9.93□□□□□ -0.82
RPA1-207ENST00000574049 SLC12A5Q9H2X9 1139 aa9.93□□□□□ -0.82
RPA1-207ENST00000574049 KIDINS220Q9ULH0 1771 aa9.92□□□□□ -0.82
RPA1-207ENST00000574049 CCDC184Q52MB2 194 aa9.92□□□□□ -0.82
RPA1-207ENST00000574049 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
RPA1-207ENST00000574049 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 PRAG1Q86YV5 1406 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.823e-6■■■■□ 24.2
RPA1-207ENST00000574049 FRAT1Q92837 279 aaPredicted RBP9.91□□□□□ -0.82
RPA1-207ENST00000574049 TNRQ92752 1358 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 HSPA2P54652 639 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 THEMISQ8N1K5 641 aaPredicted RBP9.91□□□□□ -0.82
RPA1-207ENST00000574049 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
RPA1-207ENST00000574049 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
RPA1-207ENST00000574049 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPA1-207ENST00000574049 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
RPA1-207ENST00000574049 EIF3AQ14152 1382 aaKnown RBP9.89□□□□□ -0.83
RPA1-207ENST00000574049 RPGRIP1LQ68CZ1 1315 aa9.89□□□□□ -0.83
RPA1-207ENST00000574049 ABCA6Q8N139 1617 aa9.89□□□□□ -0.83
RPA1-207ENST00000574049 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
RPA1-207ENST00000574049 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 DIP2CQ9Y2E4 1556 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 LTKP29376 864 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 GLI2P10070 1586 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 U2SURPO15042 1029 aaKnown RBP9.87□□□□□ -0.83
RPA1-207ENST00000574049 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 TESK2Q96S53 571 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 ABCC3O15438 1527 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 SPATA31E1Q6ZUB1 1445 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 MAGI2Q86UL8 1455 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 CNTLNQ9NXG0 1405 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 NOP58Q9Y2X3 529 aaKnown RBP9.86□□□□□ -0.83
RPA1-207ENST00000574049 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
RPA1-207ENST00000574049 A0A0G2JS52 829 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 ANKLE2Q86XL3 938 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 CDK19Q9BWU1 502 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 KDM5CP41229 1560 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 KDM5DQ9BY66 1539 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 PTPRTO14522 1441 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 RIMS2Q9UQ26 1411 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 IQGAP3Q86VI3 1631 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 PLIN1O60240 522 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 AMOTL2Q9Y2J4 779 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 UNC13BO14795 1591 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 308.8 ms