RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 ABCA9Q8IUA7 1624 aa10.05□□□□□ -0.8
RPA1-207ENST00000574049 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
RPA1-207ENST00000574049 TMF1P82094 1093 aa10.03□□□□□ -0.8
RPA1-207ENST00000574049 PPM1GO15355 546 aaPredicted RBP10.03□□□□□ -0.8
RPA1-207ENST00000574049 COL17A1Q9UMD9 1497 aaPredicted RBP10.03□□□□□ -0.8
RPA1-207ENST00000574049 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.8
RPA1-207ENST00000574049 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.8
RPA1-207ENST00000574049 SLC26A8Q96RN1 970 aa10.02□□□□□ -0.8
RPA1-207ENST00000574049 KIF7Q2M1P5 1343 aa10.02□□□□□ -0.81
RPA1-207ENST00000574049 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
RPA1-207ENST00000574049 SLC52A1Q9NWF4 448 aa10.01□□□□□ -0.81
RPA1-207ENST00000574049 ZFYVE16Q7Z3T8 1539 aa10.01□□□□□ -0.81
RPA1-207ENST00000574049 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPA1-207ENST00000574049 ADGBQ8N7X0 1667 aa10□□□□□ -0.81
RPA1-207ENST00000574049 TXNDC2Q86VQ3 553 aa10□□□□□ -0.81
RPA1-207ENST00000574049 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
RPA1-207ENST00000574049 ATP10AO60312 1499 aa10□□□□□ -0.81
RPA1-207ENST00000574049 RBM33Q96EV2 1170 aaKnown RBP9.99□□□□□ -0.81
RPA1-207ENST00000574049 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 UGGT1Q9NYU2 1555 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 PLA2R1Q13018 1463 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
RPA1-207ENST00000574049 KNSTRNQ9Y448 316 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 NOS1P29475 1434 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 NPATQ14207 1427 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
RPA1-207ENST00000574049 PANK3Q9H999 370 aa9.98□□□□□ -0.81
RPA1-207ENST00000574049 ZMYM3Q14202 1370 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 ZBTB7CA1YPR0 619 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 DIP2BQ9P265 1576 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 CCDC7Q96M83 1385 aa9.97□□□□□ -0.81
RPA1-207ENST00000574049 ARAP3Q8WWN8 1544 aa9.96□□□□□ -0.81
RPA1-207ENST00000574049 SOX12O15370 315 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.82
RPA1-207ENST00000574049 NEFMP07197 916 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 WAPLQ7Z5K2 1190 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 CABP2Q9NPB3 220 aa9.96□□□□□ -0.82
RPA1-207ENST00000574049 RGS3P49796 1198 aa9.95□□□□□ -0.82
RPA1-207ENST00000574049 CROCC2H7BZ55 1655 aa9.95□□□□□ -0.82
RPA1-207ENST00000574049 PRAM1Q96QH2 718 aa9.95□□□□□ -0.82
RPA1-207ENST00000574049 HECW2Q9P2P5 1572 aa9.94□□□□□ -0.82
RPA1-207ENST00000574049 CDCA8Q53HL2 280 aa9.94□□□□□ -0.82
RPA1-207ENST00000574049 CENPJQ9HC77 1338 aaPredicted RBP9.94□□□□□ -0.82
RPA1-207ENST00000574049 MAST1Q9Y2H9 1570 aa9.93□□□□□ -0.82
RPA1-207ENST00000574049 SLC12A5Q9H2X9 1139 aa9.93□□□□□ -0.82
RPA1-207ENST00000574049 KIDINS220Q9ULH0 1771 aa9.92□□□□□ -0.82
RPA1-207ENST00000574049 CCDC184Q52MB2 194 aa9.92□□□□□ -0.82
RPA1-207ENST00000574049 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
RPA1-207ENST00000574049 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 PRAG1Q86YV5 1406 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.823e-6■■■■□ 24.2
RPA1-207ENST00000574049 FRAT1Q92837 279 aaPredicted RBP9.91□□□□□ -0.82
RPA1-207ENST00000574049 TNRQ92752 1358 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 HSPA2P54652 639 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
RPA1-207ENST00000574049 THEMISQ8N1K5 641 aaPredicted RBP9.91□□□□□ -0.82
RPA1-207ENST00000574049 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
RPA1-207ENST00000574049 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
RPA1-207ENST00000574049 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPA1-207ENST00000574049 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
RPA1-207ENST00000574049 EIF3AQ14152 1382 aaKnown RBP9.89□□□□□ -0.83
RPA1-207ENST00000574049 RPGRIP1LQ68CZ1 1315 aa9.89□□□□□ -0.83
RPA1-207ENST00000574049 ABCA6Q8N139 1617 aa9.89□□□□□ -0.83
RPA1-207ENST00000574049 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 INO80Q9ULG1 1556 aaPredicted RBP9.88□□□□□ -0.83
RPA1-207ENST00000574049 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 DIP2CQ9Y2E4 1556 aa9.88□□□□□ -0.83
RPA1-207ENST00000574049 LTKP29376 864 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 GLI2P10070 1586 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 U2SURPO15042 1029 aaKnown RBP9.87□□□□□ -0.83
RPA1-207ENST00000574049 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 TESK2Q96S53 571 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 ABCC3O15438 1527 aa9.87□□□□□ -0.83
RPA1-207ENST00000574049 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 SPATA31E1Q6ZUB1 1445 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 MAGI2Q86UL8 1455 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 CNTLNQ9NXG0 1405 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 NOP58Q9Y2X3 529 aaKnown RBP9.86□□□□□ -0.83
RPA1-207ENST00000574049 MAP3K4Q9Y6R4 1608 aa9.86□□□□□ -0.83
RPA1-207ENST00000574049 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
RPA1-207ENST00000574049 A0A0G2JS52 829 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 ANKLE2Q86XL3 938 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 CDK19Q9BWU1 502 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 KDM5CP41229 1560 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 KDM5DQ9BY66 1539 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 PTPRTO14522 1441 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
RPA1-207ENST00000574049 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 RIMS2Q9UQ26 1411 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 IQGAP3Q86VI3 1631 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 PLIN1O60240 522 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 AMOTL2Q9Y2J4 779 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 UNC13BO14795 1591 aa9.84□□□□□ -0.83
RPA1-207ENST00000574049 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms