RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-202ENST00000573710 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
CACNA1A-202ENST00000573710 ANO2Q9NQ90 1003 aa19.32■□□□□ 0.68
CACNA1A-202ENST00000573710 CDR1P51861 262 aa19.31■□□□□ 0.68
CACNA1A-202ENST00000573710 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-202ENST00000573710 CHMP4BP1P59074 171 aa19.31■□□□□ 0.68
CACNA1A-202ENST00000573710 CLASRPQ8N2M8 674 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-202ENST00000573710 ZRSR2Q15696 482 aaKnown RBP19.31■□□□□ 0.68
CACNA1A-202ENST00000573710 ATP2B2Q01814 1243 aa19.3■□□□□ 0.68
CACNA1A-202ENST00000573710 TTC5Q8N0Z6 440 aa19.3■□□□□ 0.68
CACNA1A-202ENST00000573710 C9orf78Q9NZ63 289 aaPredicted RBP19.3■□□□□ 0.68
CACNA1A-202ENST00000573710 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
CACNA1A-202ENST00000573710 MYCNP04198 464 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 EIF4G1Q04637 1599 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 NF2P35240 595 aa19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 PMFBP1Q8TBY8 1022 aa19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 SPDYE4A6NLX3 237 aa19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 DDX49Q9Y6V7 483 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-202ENST00000573710 CCDC173Q0VFZ6 552 aa19.28■□□□□ 0.68
CACNA1A-202ENST00000573710 BICD2Q8TD16 824 aa19.28■□□□□ 0.68
CACNA1A-202ENST00000573710 CENPHQ9H3R5 247 aa19.28■□□□□ 0.68
CACNA1A-202ENST00000573710 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
CACNA1A-202ENST00000573710 HDAC5Q9UQL6 1122 aa19.28■□□□□ 0.68
CACNA1A-202ENST00000573710 TRDNQ13061 729 aa19.27■□□□□ 0.68
CACNA1A-202ENST00000573710 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
CACNA1A-202ENST00000573710 BCL2L13Q9BXK5 485 aa19.27■□□□□ 0.68
CACNA1A-202ENST00000573710 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.68
CACNA1A-202ENST00000573710 TAX1BP1Q86VP1 789 aa19.26■□□□□ 0.67
CACNA1A-202ENST00000573710 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
CACNA1A-202ENST00000573710 CPLX2Q6PUV4 134 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-202ENST00000573710 ZNF428Q96B54 188 aa19.26■□□□□ 0.67
CACNA1A-202ENST00000573710 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
CACNA1A-202ENST00000573710 RBM19Q9Y4C8 960 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-202ENST00000573710 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-202ENST00000573710 RBM25P49756 843 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-202ENST00000573710 HSP90B2PQ58FF3 399 aa19.24■□□□□ 0.67
CACNA1A-202ENST00000573710 SEPT11Q9NVA2 429 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-202ENST00000573710 MNS1Q8NEH6 495 aa19.24■□□□□ 0.67
CACNA1A-202ENST00000573710 KTN1Q86UP2 1357 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-202ENST00000573710 AXDND1Q5T1B0 1012 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-202ENST00000573710 DYDC1Q8WWB3 177 aa19.23■□□□□ 0.67
CACNA1A-202ENST00000573710 SYCP1Q15431 976 aa19.22■□□□□ 0.67
CACNA1A-202ENST00000573710 MATR3P43243 847 aaKnown RBP eCLIP19.21■□□□□ 0.67
CACNA1A-202ENST00000573710 ROCK2O75116 1388 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-202ENST00000573710 NEBLO76041 1014 aa19.21■□□□□ 0.67
CACNA1A-202ENST00000573710 NEXNQ0ZGT2 675 aa19.21■□□□□ 0.67
CACNA1A-202ENST00000573710 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.66
CACNA1A-202ENST00000573710 TEFQ10587 303 aa19.2■□□□□ 0.66
CACNA1A-202ENST00000573710 CHMP4AQ9BY43 222 aa19.2■□□□□ 0.66
CACNA1A-202ENST00000573710 PAXIP1Q6ZW49 1069 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-202ENST00000573710 CHMP4CQ96CF2 233 aa19.19■□□□□ 0.66
CACNA1A-202ENST00000573710 VPS37CA5D8V6 355 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-202ENST00000573710 ZHX3Q9H4I2 956 aa19.18■□□□□ 0.66
CACNA1A-202ENST00000573710 ZNF526Q8TF50 670 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-202ENST00000573710 ATP2B1P20020 1258 aa19.18■□□□□ 0.66
CACNA1A-202ENST00000573710 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
CACNA1A-202ENST00000573710 IFIT2P09913 472 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-202ENST00000573710 AIMP1Q12904 312 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 NEUROD6Q96NK8 337 aa19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 CLIP1P30622 1438 aa19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 GOLGA6L10A0A0M3HER8 536 aa19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 GOLGA6L10A6NI86 522 aa19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 FAM193AP78312 1265 aa19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 WASHC4Q2M389 1173 aa19.17■□□□□ 0.66
CACNA1A-202ENST00000573710 SASS6Q6UVJ0 657 aa19.16■□□□□ 0.66
CACNA1A-202ENST00000573710 PDCL3Q9H2J4 239 aa19.16■□□□□ 0.66
CACNA1A-202ENST00000573710 SF3B2Q13435 895 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-202ENST00000573710 RBM5P52756 815 aaKnown RBP eCLIP19.15■□□□□ 0.66
CACNA1A-202ENST00000573710 KRT18P05783 430 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-202ENST00000573710 CDK5RAP3Q96JB5 506 aa19.14■□□□□ 0.66
CACNA1A-202ENST00000573710 MYO6Q9UM54 1294 aa19.14■□□□□ 0.66
CACNA1A-202ENST00000573710 SERPINA10Q9UK55 444 aa19.14■□□□□ 0.65
CACNA1A-202ENST00000573710 ACBD3Q9H3P7 528 aa19.14■□□□□ 0.65
CACNA1A-202ENST00000573710 SAFBQ15424 915 aaKnown RBP eCLIP19.14■□□□□ 0.65
CACNA1A-202ENST00000573710 CT47B1P0C2W7 299 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-202ENST00000573710 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
CACNA1A-202ENST00000573710 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
CACNA1A-202ENST00000573710 WDR78Q5VTH9 848 aa19.12■□□□□ 0.65
CACNA1A-202ENST00000573710 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
CACNA1A-202ENST00000573710 PSME1Q06323 249 aa19.12■□□□□ 0.65
CACNA1A-202ENST00000573710 ATP6V1DQ9Y5K8 247 aa19.12■□□□□ 0.65
CACNA1A-202ENST00000573710 SSR1P43307 286 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-202ENST00000573710 HSP90AB4PQ58FF6 505 aa19.11■□□□□ 0.65
CACNA1A-202ENST00000573710 MPHOSPH10O00566 681 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-202ENST00000573710 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-202ENST00000573710 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
CACNA1A-202ENST00000573710 TAF3Q5VWG9 929 aa19.1■□□□□ 0.65
CACNA1A-202ENST00000573710 BRMS1Q9HCU9 246 aa19.1■□□□□ 0.65
CACNA1A-202ENST00000573710 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 FAM177A1Q8N128 213 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 FMNL2Q96PY5 1086 aa19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 GBP2P32456 591 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 ARGLU1Q9NWB6 273 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 ZKSCAN1P17029 563 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 CBX1P83916 185 aa19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 OLFM4Q6UX06 510 aa19.09■□□□□ 0.65
CACNA1A-202ENST00000573710 DDX11L8A8MPP1 907 aa19.08■□□□□ 0.65
CACNA1A-202ENST00000573710 DDX23Q9BUQ8 820 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms