RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
PCDHGA9-201ENST00000573521 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
PCDHGA9-201ENST00000573521 CCDC146Q8IYE0 955 aa15.19■□□□□ 0.02
PCDHGA9-201ENST00000573521 KIAA1107Q9UPP5 1409 aa15.19■□□□□ 0.02
PCDHGA9-201ENST00000573521 APAF1O14727 1248 aa15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 DIAPH1O60610 1272 aaKnown RBP15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 COG3Q96JB2 828 aa15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 GPS2Q13227 327 aa15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
PCDHGA9-201ENST00000573521 ZKSCAN1P17029 563 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA9-201ENST00000573521 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
PCDHGA9-201ENST00000573521 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
PCDHGA9-201ENST00000573521 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
PCDHGA9-201ENST00000573521 CPLX2Q6PUV4 134 aaKnown RBP15.17■□□□□ 0.02
PCDHGA9-201ENST00000573521 RNF20Q5VTR2 975 aa15.16■□□□□ 0.02
PCDHGA9-201ENST00000573521 GOLGA6L19H0YKK7 550 aa15.16■□□□□ 0.02
PCDHGA9-201ENST00000573521 MBD3O95983 291 aa15.16■□□□□ 0.02
PCDHGA9-201ENST00000573521 LMOD2Q6P5Q4 547 aa15.16■□□□□ 0.02
PCDHGA9-201ENST00000573521 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
PCDHGA9-201ENST00000573521 COG6Q9Y2V7 657 aa15.15■□□□□ 0.02
PCDHGA9-201ENST00000573521 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCDHGA9-201ENST00000573521 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
PCDHGA9-201ENST00000573521 C22orf23Q9BZE7 217 aa15.14■□□□□ 0.01
PCDHGA9-201ENST00000573521 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
PCDHGA9-201ENST00000573521 AMPHP49418 695 aa15.13■□□□□ 0.01
PCDHGA9-201ENST00000573521 GORABQ5T7V8 394 aa15.13■□□□□ 0.01
PCDHGA9-201ENST00000573521 TPM2P07951 284 aa15.13■□□□□ 0.01
PCDHGA9-201ENST00000573521 TPM1P09493 284 aa15.13■□□□□ 0.01
PCDHGA9-201ENST00000573521 TPRNQ4KMQ1 711 aa15.13■□□□□ 0.01
PCDHGA9-201ENST00000573521 CDC45O75419 566 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 NFKBIBQ15653 356 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 TRAK1Q9UPV9 953 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 HOOK1Q9UJC3 728 aaKnown RBP15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 A0A0G2JS52 829 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 APBB1O00213 710 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
PCDHGA9-201ENST00000573521 FAM43AQ8N2R8 423 aa15.11■□□□□ 0.01
PCDHGA9-201ENST00000573521 BECN2A8MW95 431 aa15.11■□□□□ 0.01
PCDHGA9-201ENST00000573521 WDR63Q8IWG1 891 aa15.11■□□□□ 0.01
PCDHGA9-201ENST00000573521 SYNJ2O15056 1496 aa15.11■□□□□ 0.01
PCDHGA9-201ENST00000573521 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 ERC2O15083 957 aa15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 NGDNQ8NEJ9 315 aaKnown RBP15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 FAM184AQ8NB25 1140 aa15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 SUPT6HQ7KZ85 1726 aaKnown RBP15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 H3BQV1 296 aa15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 IFFO2Q5TF58 517 aa15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
PCDHGA9-201ENST00000573521 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
PCDHGA9-201ENST00000573521 TROQ12816 1431 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA9-201ENST00000573521 DDX58O95786 925 aaKnown RBP15.09■□□□□ 0.01
PCDHGA9-201ENST00000573521 HMGN5P82970 282 aaKnown RBP15.09■□□□□ 0.01
PCDHGA9-201ENST00000573521 RABEP1Q15276 862 aa15.09■□□□□ 0.01
PCDHGA9-201ENST00000573521 NPHP1O15259 732 aa15.09■□□□□ 0.01
PCDHGA9-201ENST00000573521 NEXNQ0ZGT2 675 aa15.08■□□□□ 0
PCDHGA9-201ENST00000573521 TSR1Q2NL82 804 aaKnown RBP15.08■□□□□ 0
PCDHGA9-201ENST00000573521 BACH2Q9BYV9 841 aa15.08■□□□□ 0
PCDHGA9-201ENST00000573521 BIVM-ERCC5R4GMW8 1640 aa15.08■□□□□ 0
PCDHGA9-201ENST00000573521 PNISRQ8TF01 805 aaKnown RBP15.08■□□□□ 0
PCDHGA9-201ENST00000573521 PLIN1O60240 522 aa15.07■□□□□ 0
PCDHGA9-201ENST00000573521 RIPK4P57078 832 aa15.07■□□□□ 0
PCDHGA9-201ENST00000573521 TAF7LQ5H9L4 462 aa15.07■□□□□ 0
PCDHGA9-201ENST00000573521 TEX35Q5T0J7 233 aa15.06■□□□□ 0
PCDHGA9-201ENST00000573521 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.06■□□□□ 0
PCDHGA9-201ENST00000573521 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
PCDHGA9-201ENST00000573521 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ 0
PCDHGA9-201ENST00000573521 GNAI3P08754 354 aa15.05■□□□□ 0
PCDHGA9-201ENST00000573521 PDCP20941 246 aa15.05■□□□□ 0
PCDHGA9-201ENST00000573521 CCDC173Q0VFZ6 552 aa15.05■□□□□ 0
PCDHGA9-201ENST00000573521 AKNAQ7Z591 1439 aa15.05■□□□□ -0
PCDHGA9-201ENST00000573521 HIP1O00291 1037 aa15.05■□□□□ -0
PCDHGA9-201ENST00000573521 ANKRD20A12PQ8NF67 263 aa15.05■□□□□ -0
PCDHGA9-201ENST00000573521 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
PCDHGA9-201ENST00000573521 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
PCDHGA9-201ENST00000573521 PPP2R1AP30153 589 aa15.04■□□□□ -0
PCDHGA9-201ENST00000573521 SYNE3Q6ZMZ3 975 aa15.04■□□□□ -0
PCDHGA9-201ENST00000573521 ARGLU1Q9NWB6 273 aaPredicted RBP15.04■□□□□ -0
PCDHGA9-201ENST00000573521 PSMA5P28066 241 aa15.03■□□□□ -0
PCDHGA9-201ENST00000573521 CCP110O43303 1012 aa15.03■□□□□ -0
PCDHGA9-201ENST00000573521 ACBD3Q9H3P7 528 aa15.03■□□□□ -0
PCDHGA9-201ENST00000573521 CSB-PGBD3P0DP91 1061 aa15.03■□□□□ -0
PCDHGA9-201ENST00000573521 CCDC47Q96A33 483 aaKnown RBP15.03■□□□□ -0
PCDHGA9-201ENST00000573521 TEFQ10587 303 aa15.02■□□□□ -0
PCDHGA9-201ENST00000573521 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
PCDHGA9-201ENST00000573521 C9orf84Q5VXU9 1444 aa15.02■□□□□ -0
PCDHGA9-201ENST00000573521 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
PCDHGA9-201ENST00000573521 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
PCDHGA9-201ENST00000573521 RILPL2Q969X0 211 aa15.02■□□□□ -0
PCDHGA9-201ENST00000573521 SMC3Q9UQE7 1217 aa15.02■□□□□ -0
PCDHGA9-201ENST00000573521 RRP7AQ9Y3A4 280 aaKnown RBP15.02■□□□□ -0
PCDHGA9-201ENST00000573521 NAT10Q9H0A0 1025 aaKnown RBP15.02□□□□□ -0.01
PCDHGA9-201ENST00000573521 DAPK1P53355 1430 aa15.02□□□□□ -0.01
PCDHGA9-201ENST00000573521 SETQ01105 290 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms