RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PLCG2P16885 1265 aa7.06□□□□□ -1.28
TOPBP1-210ENST00000572787 ZNF16P17020 682 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-210ENST00000572787 B4GALNT3Q6L9W6 998 aa7.06□□□□□ -1.28
TOPBP1-210ENST00000572787 CRISPLD2Q9H0B8 497 aa7.06□□□□□ -1.28
TOPBP1-210ENST00000572787 MYH16Q9H6N6 1097 aa7.06□□□□□ -1.28
TOPBP1-210ENST00000572787 GNPATO15228 680 aa7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 SRPK2P78362 688 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 EXOC8Q8IYI6 725 aa7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 RASEFQ8IZ41 740 aa7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 PPP1R1BQ9UD71 204 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
TOPBP1-210ENST00000572787 PRM3Q9NNZ6 103 aa7.04□□□□□ -1.28
TOPBP1-210ENST00000572787 RFX1P22670 979 aa7.03□□□□□ -1.28
TOPBP1-210ENST00000572787 PROCA1Q8NCQ7 364 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-210ENST00000572787 FBXO22Q8NEZ5 403 aa7.03□□□□□ -1.28
TOPBP1-210ENST00000572787 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
TOPBP1-210ENST00000572787 GDPD2Q9HCC8 539 aa7.03□□□□□ -1.28
TOPBP1-210ENST00000572787 NUTM2FA1L443 756 aa7.02□□□□□ -1.29
TOPBP1-210ENST00000572787 CARNS1A5YM72 827 aa7.02□□□□□ -1.29
TOPBP1-210ENST00000572787 SETQ01105 290 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-210ENST00000572787 DNAJC14Q6Y2X3 702 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-210ENST00000572787 MARVELD3Q96A59 401 aa7.02□□□□□ -1.29
TOPBP1-210ENST00000572787 PPME1Q9Y570 386 aa7.02□□□□□ -1.29
TOPBP1-210ENST00000572787 POM121CA8CG34 1229 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 SOX12O15370 315 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 VAMP1P23763 118 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 HIC1Q14526 733 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 PDIA6Q15084 440 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 TMEM259Q4ZIN3 620 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 NAALADL2Q58DX5 795 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 CFAP70Q5T0N1 1121 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 GORABQ5T7V8 394 aa7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 CCER1Q8TC90 406 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-210ENST00000572787 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
TOPBP1-210ENST00000572787 MICAL1Q8TDZ2 1067 aa7□□□□□ -1.29
TOPBP1-210ENST00000572787 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
TOPBP1-210ENST00000572787 TMEM106CQ9BVX2 250 aa7□□□□□ -1.29
TOPBP1-210ENST00000572787 TMEM88BA6NKF7 163 aa6.99□□□□□ -1.29
TOPBP1-210ENST00000572787 TPD52L2O43399 206 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-210ENST00000572787 FCHSD2O94868 740 aa6.99□□□□□ -1.29
TOPBP1-210ENST00000572787 GIMAP6Q6P9H5 292 aa6.99□□□□□ -1.29
TOPBP1-210ENST00000572787 BCL11AQ9H165 835 aa6.99□□□□□ -1.29
TOPBP1-210ENST00000572787 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-210ENST00000572787 RFC5P40937 340 aa6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 ABL2P42684 1182 aa6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 IRX6P78412 446 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 HSP90AB4PQ58FF6 505 aa6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 CCDC181Q5TID7 509 aa6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 NOP9Q86U38 636 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 POLR3EQ9NVU0 708 aa6.98□□□□□ -1.29
TOPBP1-210ENST00000572787 SOCS7O14512 581 aa6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 ATG7O95352 703 aa6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 CLCN1P35523 988 aa6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 HDGFL1Q5TGJ6 251 aa6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 IFNL1Q8IU54 200 aa6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 REPIN1Q9BWE0 567 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 METTL14Q9HCE5 456 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 RBM27Q9P2N5 1060 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 SUGT1Q9Y2Z0 365 aa6.97□□□□□ -1.29
TOPBP1-210ENST00000572787 DPYSL4O14531 572 aa6.96□□□□□ -1.3
TOPBP1-210ENST00000572787 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-210ENST00000572787 DPH6Q7L8W6 267 aa6.96□□□□□ -1.3
TOPBP1-210ENST00000572787 OCEL1Q9H607 264 aa6.96□□□□□ -1.3
TOPBP1-210ENST00000572787 FECHP22830 423 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 PSEN1P49768 467 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 EMP3P54852 163 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 MTMR14Q8NCE2 650 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 TMUB1Q9BVT8 246 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 PPP1R12CQ9BZL4 782 aa6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 TMA7Q9Y2S6 64 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-210ENST00000572787 HMGB1P1B2RPK0 211 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-210ENST00000572787 MAFGO15525 162 aa6.94□□□□□ -1.3
TOPBP1-210ENST00000572787 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
TOPBP1-210ENST00000572787 TBC1D2Q9BYX2 928 aa6.94□□□□□ -1.3
TOPBP1-210ENST00000572787 PHF8Q9UPP1 1060 aa6.94□□□□□ -1.3
TOPBP1-210ENST00000572787 SSTR3P32745 418 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-210ENST00000572787 MCCD1P59942 119 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-210ENST00000572787 BEGAINQ9BUH8 593 aa6.93□□□□□ -1.3
TOPBP1-210ENST00000572787 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
TOPBP1-210ENST00000572787 CLK2P49760 499 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-210ENST00000572787 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
TOPBP1-210ENST00000572787 EFCAB3Q8N7B9 438 aa6.92□□□□□ -1.3
TOPBP1-210ENST00000572787 RBM46Q8TBY0 533 aaKnown RBP6.92□□□□□ -1.3
TOPBP1-210ENST00000572787 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
TOPBP1-210ENST00000572787 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-210ENST00000572787 MARSP56192 900 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-210ENST00000572787 FGD1P98174 961 aa6.91□□□□□ -1.3
TOPBP1-210ENST00000572787 PPP1R15BQ5SWA1 713 aa6.91□□□□□ -1.3
TOPBP1-210ENST00000572787 MORC4Q8TE76 937 aa6.91□□□□□ -1.3
TOPBP1-210ENST00000572787 A0A0U1RQG5 324 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 PTMSP20962 102 aa6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 LMOD1P29536 600 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 ANAPC15P60006 121 aa6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 WASHC4Q2M389 1173 aa6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 PPP2R2DQ66LE6 453 aa6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 NPAS4Q8IUM7 802 aa6.9□□□□□ -1.3
TOPBP1-210ENST00000572787 ADAMTS19Q8TE59 1207 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms