RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 TMEM134Q9H6X4 195 aa8.64□□□□□ -1.03
CDC27-213ENST00000571643 LAPTM4AQ15012 233 aa8.63□□□□□ -1.03
CDC27-213ENST00000571643 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
CDC27-213ENST00000571643 RCCD1A6NED2 376 aa8.62□□□□□ -1.03
CDC27-213ENST00000571643 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
CDC27-213ENST00000571643 IL21Q9HBE4 155 aa8.61□□□□□ -1.03
CDC27-213ENST00000571643 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
CDC27-213ENST00000571643 MTRQ99707 1265 aa8.6□□□□□ -1.03
CDC27-213ENST00000571643 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
CDC27-213ENST00000571643 MAP2K5Q13163 448 aa8.58□□□□□ -1.04
CDC27-213ENST00000571643 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
CDC27-213ENST00000571643 FECHP22830 423 aa8.56□□□□□ -1.04
CDC27-213ENST00000571643 APLP1P51693 650 aa8.56□□□□□ -1.04
CDC27-213ENST00000571643 LMOD2Q6P5Q4 547 aa8.56□□□□□ -1.04
CDC27-213ENST00000571643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDC27-213ENST00000571643 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
CDC27-213ENST00000571643 SULF1Q8IWU6 871 aa8.55□□□□□ -1.04
CDC27-213ENST00000571643 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
CDC27-213ENST00000571643 Q6ZNB5 142 aa8.54□□□□□ -1.04
CDC27-213ENST00000571643 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
CDC27-213ENST00000571643 CFHP08603 1231 aa8.53□□□□□ -1.04
CDC27-213ENST00000571643 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
CDC27-213ENST00000571643 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
CDC27-213ENST00000571643 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
CDC27-213ENST00000571643 LCE2BO14633 110 aa8.51□□□□□ -1.05
CDC27-213ENST00000571643 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
CDC27-213ENST00000571643 ZNF516Q92618 1163 aa8.51□□□□□ -1.05
CDC27-213ENST00000571643 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
CDC27-213ENST00000571643 NRG2O14511 850 aaPredicted RBP8.5□□□□□ -1.05
CDC27-213ENST00000571643 IRF6O14896 467 aa8.5□□□□□ -1.05
CDC27-213ENST00000571643 TMUB1Q9BVT8 246 aa8.5□□□□□ -1.05
CDC27-213ENST00000571643 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.5□□□□□ -1.05
CDC27-213ENST00000571643 RDH13Q8NBN7 331 aa8.49□□□□□ -1.05
CDC27-213ENST00000571643 SLC10A3P09131 477 aa8.48□□□□□ -1.05
CDC27-213ENST00000571643 GGCXP38435 758 aa8.48□□□□□ -1.05
CDC27-213ENST00000571643 DDX11L8A8MPP1 907 aa8.47□□□□□ -1.05
CDC27-213ENST00000571643 GFRA3O60609 400 aa8.47□□□□□ -1.05
CDC27-213ENST00000571643 COPS2P61201 443 aa8.47□□□□□ -1.05
CDC27-213ENST00000571643 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
CDC27-213ENST00000571643 ZPR1O75312 459 aa8.46□□□□□ -1.06
CDC27-213ENST00000571643 NR1I2O75469 434 aa8.46□□□□□ -1.06
CDC27-213ENST00000571643 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
CDC27-213ENST00000571643 PHOX2BQ99453 314 aa8.45□□□□□ -1.06
CDC27-213ENST00000571643 CLCN1P35523 988 aa8.44□□□□□ -1.06
CDC27-213ENST00000571643 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
CDC27-213ENST00000571643 TRAF7Q6Q0C0 670 aa8.44□□□□□ -1.06
CDC27-213ENST00000571643 KRI1Q8N9T8 703 aaKnown RBP8.44□□□□□ -1.06
CDC27-213ENST00000571643 NKX2-3Q8TAU0 364 aa8.44□□□□□ -1.06
CDC27-213ENST00000571643 ZMYND10O75800 440 aa8.43□□□□□ -1.06
CDC27-213ENST00000571643 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
CDC27-213ENST00000571643 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
CDC27-213ENST00000571643 NLRP7Q8WX94 980 aa8.42□□□□□ -1.06
CDC27-213ENST00000571643 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
CDC27-213ENST00000571643 GCGRP47871 477 aa8.41□□□□□ -1.06
CDC27-213ENST00000571643 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
CDC27-213ENST00000571643 BCANQ96GW7 911 aa8.41□□□□□ -1.06
CDC27-213ENST00000571643 CD46P15529 392 aa8.4□□□□□ -1.06
CDC27-213ENST00000571643 ATP6V1AP38606 617 aa8.4□□□□□ -1.06
CDC27-213ENST00000571643 ADH1BP00325 375 aa8.39□□□□□ -1.07
CDC27-213ENST00000571643 USP46P62068 366 aa8.38□□□□□ -1.07
CDC27-213ENST00000571643 FUT2Q10981 343 aa8.38□□□□□ -1.07
CDC27-213ENST00000571643 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
CDC27-213ENST00000571643 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
CDC27-213ENST00000571643 AMHR2Q16671 573 aa8.37□□□□□ -1.07
CDC27-213ENST00000571643 MORN1Q5T089 497 aa8.37□□□□□ -1.07
CDC27-213ENST00000571643 TLL1O43897 1013 aa8.36□□□□□ -1.07
CDC27-213ENST00000571643 SCUBE3Q8IX30 993 aa8.36□□□□□ -1.07
CDC27-213ENST00000571643 ANKLE1Q8NAG6 615 aa8.36□□□□□ -1.07
CDC27-213ENST00000571643 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
CDC27-213ENST00000571643 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
CDC27-213ENST00000571643 KDM4AO75164 1064 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
CDC27-213ENST00000571643 PRR20EP86478 221 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 PRR20CP86479 221 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 PRR20DP86480 221 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 PRR20BP86481 221 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 PRR20AP86496 221 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
CDC27-213ENST00000571643 PUS10Q3MIT2 529 aaKnown RBP8.35□□□□□ -1.07
CDC27-213ENST00000571643 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
CDC27-213ENST00000571643 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
CDC27-213ENST00000571643 Q3C1V9 767 aa8.34□□□□□ -1.07
CDC27-213ENST00000571643 AK7Q96M32 723 aa8.34□□□□□ -1.07
CDC27-213ENST00000571643 SPSB2Q99619 263 aa8.34□□□□□ -1.07
CDC27-213ENST00000571643 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
CDC27-213ENST00000571643 SLC19A1P41440 591 aa8.32□□□□□ -1.08
CDC27-213ENST00000571643 S1PR4O95977 384 aa8.31□□□□□ -1.08
CDC27-213ENST00000571643 SPRYD7Q5W111 196 aa8.31□□□□□ -1.08
CDC27-213ENST00000571643 NUTM1Q86Y26 1132 aa8.31□□□□□ -1.08
CDC27-213ENST00000571643 SLC27A5Q9Y2P5 690 aa8.31□□□□□ -1.08
CDC27-213ENST00000571643 ZNF598Q86UK7 904 aaKnown RBP8.3□□□□□ -1.08
CDC27-213ENST00000571643 HOXA2O43364 376 aa8.29□□□□□ -1.08
CDC27-213ENST00000571643 MSS51Q4VC12 460 aa8.29□□□□□ -1.08
CDC27-213ENST00000571643 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
CDC27-213ENST00000571643 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
CDC27-213ENST00000571643 DIXDC1Q155Q3 683 aa8.28□□□□□ -1.08
CDC27-213ENST00000571643 GIGYF2Q6Y7W6 1299 aaKnown RBP8.28□□□□□ -1.08
CDC27-213ENST00000571643 TRIM66O15016 1216 aa8.27□□□□□ -1.09
CDC27-213ENST00000571643 DGAT1O75907 488 aa8.27□□□□□ -1.09
CDC27-213ENST00000571643 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms