RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
TRPV1-206ENST00000571088 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
TRPV1-206ENST00000571088 ERBINQ96RT1 1412 aa17.02■□□□□ 0.32
TRPV1-206ENST00000571088 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.32
TRPV1-206ENST00000571088 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
TRPV1-206ENST00000571088 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
TRPV1-206ENST00000571088 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
TRPV1-206ENST00000571088 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
TRPV1-206ENST00000571088 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
TRPV1-206ENST00000571088 CCDC141Q6ZP82 1450 aa17.01■□□□□ 0.31
TRPV1-206ENST00000571088 KIF14Q15058 1648 aa17.01■□□□□ 0.31
TRPV1-206ENST00000571088 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
TRPV1-206ENST00000571088 POGKQ9P215 609 aa17■□□□□ 0.31
TRPV1-206ENST00000571088 DDX49Q9Y6V7 483 aaKnown RBP17■□□□□ 0.31
TRPV1-206ENST00000571088 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
TRPV1-206ENST00000571088 PZPP20742 1482 aa17■□□□□ 0.31
TRPV1-206ENST00000571088 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
TRPV1-206ENST00000571088 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRPV1-206ENST00000571088 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
TRPV1-206ENST00000571088 MRE11P49959 708 aa16.98■□□□□ 0.31
TRPV1-206ENST00000571088 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
TRPV1-206ENST00000571088 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
TRPV1-206ENST00000571088 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
TRPV1-206ENST00000571088 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
TRPV1-206ENST00000571088 TRAK2O60296 914 aa16.97■□□□□ 0.31
TRPV1-206ENST00000571088 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
TRPV1-206ENST00000571088 SMC4Q9NTJ3 1288 aa16.97■□□□□ 0.31
TRPV1-206ENST00000571088 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
TRPV1-206ENST00000571088 GGT6Q6P531 493 aa16.95■□□□□ 0.3
TRPV1-206ENST00000571088 KDM6BO15054 1643 aa16.94■□□□□ 0.3
TRPV1-206ENST00000571088 RNF123Q5XPI4 1314 aa16.94■□□□□ 0.3
TRPV1-206ENST00000571088 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
TRPV1-206ENST00000571088 SKOR2Q2VWA4 1001 aaPredicted RBP16.94■□□□□ 0.3
TRPV1-206ENST00000571088 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
TRPV1-206ENST00000571088 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
TRPV1-206ENST00000571088 ARHGEF12Q9NZN5 1544 aa16.93■□□□□ 0.3
TRPV1-206ENST00000571088 APBB1O00213 710 aa16.93■□□□□ 0.3
TRPV1-206ENST00000571088 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
TRPV1-206ENST00000571088 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
TRPV1-206ENST00000571088 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
TRPV1-206ENST00000571088 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
TRPV1-206ENST00000571088 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
TRPV1-206ENST00000571088 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
TRPV1-206ENST00000571088 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRPV1-206ENST00000571088 DISP1Q96F81 1524 aa16.9■□□□□ 0.3
TRPV1-206ENST00000571088 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
TRPV1-206ENST00000571088 ESF1Q9H501 851 aaKnown RBP16.89■□□□□ 0.29
TRPV1-206ENST00000571088 RRP9O43818 475 aaKnown RBP16.89■□□□□ 0.29
TRPV1-206ENST00000571088 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
TRPV1-206ENST00000571088 AAMPQ13685 434 aa16.88■□□□□ 0.29
TRPV1-206ENST00000571088 FOXD4L5Q5VV16 416 aaPredicted RBP16.88■□□□□ 0.29
TRPV1-206ENST00000571088 FOXD4L4Q8WXT5 416 aaPredicted RBP16.88■□□□□ 0.29
TRPV1-206ENST00000571088 RUNDC1Q96C34 613 aa16.88■□□□□ 0.29
TRPV1-206ENST00000571088 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
TRPV1-206ENST00000571088 ESPNB1AK53 854 aa16.87■□□□□ 0.29
TRPV1-206ENST00000571088 PDE3AQ14432 1141 aa16.87■□□□□ 0.29
TRPV1-206ENST00000571088 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
TRPV1-206ENST00000571088 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
TRPV1-206ENST00000571088 DISP3Q9P2K9 1392 aa16.86■□□□□ 0.29
TRPV1-206ENST00000571088 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
TRPV1-206ENST00000571088 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
TRPV1-206ENST00000571088 CFAP70Q5T0N1 1121 aa16.86■□□□□ 0.29
TRPV1-206ENST00000571088 ATP10BO94823 1461 aa16.86■□□□□ 0.29
TRPV1-206ENST00000571088 BCAR3O75815 825 aa16.85■□□□□ 0.29
TRPV1-206ENST00000571088 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
TRPV1-206ENST00000571088 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
TRPV1-206ENST00000571088 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
TRPV1-206ENST00000571088 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
TRPV1-206ENST00000571088 MCM4P33991 863 aa16.85■□□□□ 0.29
TRPV1-206ENST00000571088 STK26Q9P289 416 aa16.85■□□□□ 0.29
TRPV1-206ENST00000571088 RBM10P98175 930 aaKnown RBP16.85■□□□□ 0.29
TRPV1-206ENST00000571088 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
TRPV1-206ENST00000571088 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
TRPV1-206ENST00000571088 SYAP1Q96A49 352 aaPredicted RBP16.83■□□□□ 0.28
TRPV1-206ENST00000571088 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
TRPV1-206ENST00000571088 GRPEL1Q9HAV7 217 aa16.83■□□□□ 0.28
TRPV1-206ENST00000571088 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
TRPV1-206ENST00000571088 TPM2P07951 284 aa16.83■□□□□ 0.28
TRPV1-206ENST00000571088 DRC7Q8IY82 874 aa16.83■□□□□ 0.28
TRPV1-206ENST00000571088 DUSP27Q5VZP5 1158 aa16.82■□□□□ 0.28
TRPV1-206ENST00000571088 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
TRPV1-206ENST00000571088 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
TRPV1-206ENST00000571088 FAM135AQ9P2D6 1515 aa16.82■□□□□ 0.28
TRPV1-206ENST00000571088 A0A0U1RQG5 324 aaPredicted RBP16.82■□□□□ 0.28
TRPV1-206ENST00000571088 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
TRPV1-206ENST00000571088 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
TRPV1-206ENST00000571088 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
TRPV1-206ENST00000571088 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
TRPV1-206ENST00000571088 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
TRPV1-206ENST00000571088 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
TRPV1-206ENST00000571088 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
TRPV1-206ENST00000571088 MCCP23508 829 aa16.8■□□□□ 0.28
TRPV1-206ENST00000571088 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
TRPV1-206ENST00000571088 ADGBQ8N7X0 1667 aa16.8■□□□□ 0.28
TRPV1-206ENST00000571088 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
TRPV1-206ENST00000571088 TESK2Q96S53 571 aa16.8■□□□□ 0.28
TRPV1-206ENST00000571088 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
TRPV1-206ENST00000571088 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
TRPV1-206ENST00000571088 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
TRPV1-206ENST00000571088 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms