RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 ZMYND10O75800 440 aa14.31□□□□□ -0.12
CDC27-212ENST00000570818 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
CDC27-212ENST00000570818 NYAP1Q6ZVC0 841 aa14.31□□□□□ -0.12
CDC27-212ENST00000570818 TMEM134Q9H6X4 195 aa14.31□□□□□ -0.12
CDC27-212ENST00000570818 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
CDC27-212ENST00000570818 PPP4CP60510 307 aa14.3□□□□□ -0.12
CDC27-212ENST00000570818 BARGINQ6ZT62 677 aa14.29□□□□□ -0.12
CDC27-212ENST00000570818 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
CDC27-212ENST00000570818 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
CDC27-212ENST00000570818 WBP1LQ9NX94 342 aa14.24□□□□□ -0.13
CDC27-212ENST00000570818 PRR14Q9BWN1 585 aa14.21□□□□□ -0.13
CDC27-212ENST00000570818 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
CDC27-212ENST00000570818 SULF1Q8IWU6 871 aa14.19□□□□□ -0.14
CDC27-212ENST00000570818 PHOX2BQ99453 314 aa14.16□□□□□ -0.14
CDC27-212ENST00000570818 KMT5BQ4FZB7 885 aa14.15□□□□□ -0.14
CDC27-212ENST00000570818 AK7Q96M32 723 aa14.15□□□□□ -0.14
CDC27-212ENST00000570818 CLCN1P35523 988 aa14.14□□□□□ -0.15
CDC27-212ENST00000570818 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
CDC27-212ENST00000570818 DDX11L8A8MPP1 907 aa14.12□□□□□ -0.15
CDC27-212ENST00000570818 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
CDC27-212ENST00000570818 RDH13Q8NBN7 331 aa14.12□□□□□ -0.15
CDC27-212ENST00000570818 GPCPD1Q9NPB8 672 aa14.1□□□□□ -0.15
CDC27-212ENST00000570818 CFHP08603 1231 aa14.09□□□□□ -0.15
CDC27-212ENST00000570818 PLA2G2EQ9NZK7 142 aa14.09□□□□□ -0.15
CDC27-212ENST00000570818 TTLL12Q14166 644 aaPredicted RBP14.08□□□□□ -0.16
CDC27-212ENST00000570818 APLP1P51693 650 aa14.07□□□□□ -0.16
CDC27-212ENST00000570818 AMHR2Q16671 573 aa14.07□□□□□ -0.16
CDC27-212ENST00000570818 SLC24A3Q9HC58 644 aa14.07□□□□□ -0.16
CDC27-212ENST00000570818 SLC10A3P09131 477 aa14.06□□□□□ -0.16
CDC27-212ENST00000570818 TRIM66O15016 1216 aa14.04□□□□□ -0.16
CDC27-212ENST00000570818 PCDHB3Q9Y5E6 796 aa14.04□□□□□ -0.16
CDC27-212ENST00000570818 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
CDC27-212ENST00000570818 KCNC4Q03721 635 aa14.03□□□□□ -0.16
CDC27-212ENST00000570818 ITGBL1O95965 494 aaPredicted RBP14.02□□□□□ -0.17
CDC27-212ENST00000570818 IL21Q9HBE4 155 aa14.01□□□□□ -0.17
CDC27-212ENST00000570818 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
CDC27-212ENST00000570818 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
CDC27-212ENST00000570818 MTRQ99707 1265 aa13.99□□□□□ -0.17
CDC27-212ENST00000570818 CD46P15529 392 aa13.98□□□□□ -0.17
CDC27-212ENST00000570818 GCGRP47871 477 aa13.98□□□□□ -0.17
CDC27-212ENST00000570818 TMUB1Q9BVT8 246 aa13.98□□□□□ -0.17
CDC27-212ENST00000570818 GRIPAP1Q4V328 841 aa13.97□□□□□ -0.17
CDC27-212ENST00000570818 PDE4DQ08499 809 aa13.96□□□□□ -0.17
CDC27-212ENST00000570818 TJAP1Q5JTD0 557 aa13.96□□□□□ -0.17
CDC27-212ENST00000570818 GIGYF2Q6Y7W6 1299 aaKnown RBP13.96□□□□□ -0.17
CDC27-212ENST00000570818 SSTR3P32745 418 aaPredicted RBP13.95□□□□□ -0.18
CDC27-212ENST00000570818 COPS2P61201 443 aa13.95□□□□□ -0.18
CDC27-212ENST00000570818 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
CDC27-212ENST00000570818 NR1I2O75469 434 aa13.94□□□□□ -0.18
CDC27-212ENST00000570818 PARP9Q8IXQ6 854 aa13.94□□□□□ -0.18
CDC27-212ENST00000570818 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
CDC27-212ENST00000570818 FUT2Q10981 343 aa13.92□□□□□ -0.18
CDC27-212ENST00000570818 BLOC1S3Q6QNY0 202 aa13.92□□□□□ -0.18
CDC27-212ENST00000570818 REPIN1Q9BWE0 567 aaKnown RBP13.92□□□□□ -0.18
CDC27-212ENST00000570818 KDM4AO75164 1064 aa13.91□□□□□ -0.18
CDC27-212ENST00000570818 USP46P62068 366 aa13.91□□□□□ -0.18
CDC27-212ENST00000570818 NUTM1Q86Y26 1132 aa13.9□□□□□ -0.18
CDC27-212ENST00000570818 ZPR1O75312 459 aa13.89□□□□□ -0.19
CDC27-212ENST00000570818 PUS10Q3MIT2 529 aaKnown RBP13.87□□□□□ -0.19
CDC27-212ENST00000570818 ZNF516Q92618 1163 aa13.86□□□□□ -0.19
CDC27-212ENST00000570818 DIXDC1Q155Q3 683 aa13.85□□□□□ -0.19
CDC27-212ENST00000570818 MORN1Q5T089 497 aa13.85□□□□□ -0.19
CDC27-212ENST00000570818 SCUBE3Q8IX30 993 aa13.84□□□□□ -0.19
CDC27-212ENST00000570818 BEGAINQ9BUH8 593 aa13.84□□□□□ -0.19
CDC27-212ENST00000570818 A0A0G2JS52 829 aa13.83□□□□□ -0.2
CDC27-212ENST00000570818 GGCXP38435 758 aa13.83□□□□□ -0.2
CDC27-212ENST00000570818 Q3C1V9 767 aa13.81□□□□□ -0.2
CDC27-212ENST00000570818 MS4A1P11836 297 aa13.8□□□□□ -0.2
CDC27-212ENST00000570818 HOXA2O43364 376 aa13.79□□□□□ -0.2
CDC27-212ENST00000570818 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
CDC27-212ENST00000570818 ADH1BP00325 375 aa13.78□□□□□ -0.2
CDC27-212ENST00000570818 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
CDC27-212ENST00000570818 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
CDC27-212ENST00000570818 NKX2-3Q8TAU0 364 aa13.77□□□□□ -0.21
CDC27-212ENST00000570818 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.21
CDC27-212ENST00000570818 SPSB2Q99619 263 aa13.77□□□□□ -0.21
CDC27-212ENST00000570818 TLL1O43897 1013 aa13.76□□□□□ -0.21
CDC27-212ENST00000570818 KDM4CQ9H3R0 1056 aa13.75□□□□□ -0.21
CDC27-212ENST00000570818 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.73□□□□□ -0.21
CDC27-212ENST00000570818 RGS20O76081 388 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 FDX1P10109 184 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 TBC1D2Q9BYX2 928 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 SLC6A16Q9GZN6 736 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 RSPH6AQ9H0K4 717 aa13.72□□□□□ -0.21
CDC27-212ENST00000570818 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
CDC27-212ENST00000570818 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
CDC27-212ENST00000570818 THAP11Q96EK4 314 aa13.7□□□□□ -0.22
CDC27-212ENST00000570818 GJA5P36382 358 aa13.69□□□□□ -0.22
CDC27-212ENST00000570818 MOXD2PA6NHM9 499 aa13.68□□□□□ -0.22
CDC27-212ENST00000570818 RNF19BQ6ZMZ0 732 aa13.67□□□□□ -0.22
CDC27-212ENST00000570818 HLA-CQ95604 372 aa13.67□□□□□ -0.22
CDC27-212ENST00000570818 S1PR4O95977 384 aa13.66□□□□□ -0.22
CDC27-212ENST00000570818 GUCA2AQ02747 115 aa13.66□□□□□ -0.22
CDC27-212ENST00000570818 USB1Q9BQ65 265 aaKnown RBP13.66□□□□□ -0.22
CDC27-212ENST00000570818 NDUFV2P19404 249 aa13.65□□□□□ -0.22
CDC27-212ENST00000570818 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
CDC27-212ENST00000570818 C6orf229H3BNL8 230 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms