RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 TMEM94Q12767 1356 aa18.86■□□□□ 0.61
RBFOX1-218ENST00000569889 ADGRB3O60242 1522 aa18.85■□□□□ 0.61
RBFOX1-218ENST00000569889 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
RBFOX1-218ENST00000569889 TET3O43151 1660 aa18.83■□□□□ 0.61
RBFOX1-218ENST00000569889 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-218ENST00000569889 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-218ENST00000569889 RIMS2Q9UQ26 1411 aa18.82■□□□□ 0.6
RBFOX1-218ENST00000569889 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
RBFOX1-218ENST00000569889 NUP155O75694 1391 aa18.8■□□□□ 0.6
RBFOX1-218ENST00000569889 E9PCH4 1651 aa18.79■□□□□ 0.6
RBFOX1-218ENST00000569889 RPRD2Q5VT52 1461 aaKnown RBP18.78■□□□□ 0.6
RBFOX1-218ENST00000569889 UNC13BO14795 1591 aa18.77■□□□□ 0.6
RBFOX1-218ENST00000569889 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
RBFOX1-218ENST00000569889 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.75■□□□□ 0.59
RBFOX1-218ENST00000569889 MSH6P52701 1360 aa18.75■□□□□ 0.59
RBFOX1-218ENST00000569889 ROCK1Q13464 1354 aa18.74■□□□□ 0.59
RBFOX1-218ENST00000569889 PLEKHG1Q9ULL1 1385 aa18.74■□□□□ 0.59
RBFOX1-218ENST00000569889 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
RBFOX1-218ENST00000569889 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
RBFOX1-218ENST00000569889 CHD2O14647 1828 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-218ENST00000569889 ZNF326Q5BKZ1 582 aaKnown RBP18.73■□□□□ 0.59
RBFOX1-218ENST00000569889 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
RBFOX1-218ENST00000569889 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
RBFOX1-218ENST00000569889 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
RBFOX1-218ENST00000569889 TBX22Q9Y458 520 aa18.71■□□□□ 0.59
RBFOX1-218ENST00000569889 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
RBFOX1-218ENST00000569889 NWD1Q149M9 1564 aa18.68■□□□□ 0.58
RBFOX1-218ENST00000569889 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
RBFOX1-218ENST00000569889 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
RBFOX1-218ENST00000569889 PHLPP1O60346 1717 aa18.66■□□□□ 0.58
RBFOX1-218ENST00000569889 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
RBFOX1-218ENST00000569889 ATF3P18847 181 aa18.65■□□□□ 0.58
RBFOX1-218ENST00000569889 ADAMTS13Q76LX8 1427 aa18.65■□□□□ 0.58
RBFOX1-218ENST00000569889 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
RBFOX1-218ENST00000569889 POTEAQ6S8J7 498 aa18.61■□□□□ 0.57
RBFOX1-218ENST00000569889 C19orf44Q9H6X5 657 aa18.6■□□□□ 0.57
RBFOX1-218ENST00000569889 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
RBFOX1-218ENST00000569889 MEX3CQ5U5Q3 659 aaKnown RBP18.59■□□□□ 0.57
RBFOX1-218ENST00000569889 CADPS2Q86UW7 1296 aa18.59■□□□□ 0.57
RBFOX1-218ENST00000569889 TRPM2O94759 1503 aa18.59■□□□□ 0.57
RBFOX1-218ENST00000569889 PTPRUQ92729 1446 aa18.58■□□□□ 0.57
RBFOX1-218ENST00000569889 JCADQ9P266 1359 aa18.56■□□□□ 0.56
RBFOX1-218ENST00000569889 DIP2AQ14689 1571 aa18.56■□□□□ 0.56
RBFOX1-218ENST00000569889 NUTM2BA6NNL0 878 aaPredicted RBP18.56■□□□□ 0.56
RBFOX1-218ENST00000569889 NUTM2EB1AL46 878 aaPredicted RBP18.56■□□□□ 0.56
RBFOX1-218ENST00000569889 NUTM2AQ8IVF1 878 aaPredicted RBP18.56■□□□□ 0.56
RBFOX1-218ENST00000569889 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
RBFOX1-218ENST00000569889 KIF1BO60333 1816 aa18.55■□□□□ 0.56
RBFOX1-218ENST00000569889 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
RBFOX1-218ENST00000569889 NAIPQ13075 1403 aa18.53■□□□□ 0.56
RBFOX1-218ENST00000569889 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
RBFOX1-218ENST00000569889 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
RBFOX1-218ENST00000569889 METP08581 1390 aa18.53■□□□□ 0.56
RBFOX1-218ENST00000569889 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
RBFOX1-218ENST00000569889 FOXD1Q16676 465 aa18.52■□□□□ 0.56
RBFOX1-218ENST00000569889 NRXN3Q9Y4C0 1643 aa18.52■□□□□ 0.55
RBFOX1-218ENST00000569889 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
RBFOX1-218ENST00000569889 COL16A1Q07092 1604 aaPredicted RBP18.5■□□□□ 0.55
RBFOX1-218ENST00000569889 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
RBFOX1-218ENST00000569889 SETBP1Q9Y6X0 1596 aa18.47■□□□□ 0.55
RBFOX1-218ENST00000569889 NEXMIFQ5QGS0 1516 aa18.47■□□□□ 0.55
RBFOX1-218ENST00000569889 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-218ENST00000569889 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-218ENST00000569889 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
RBFOX1-218ENST00000569889 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
RBFOX1-218ENST00000569889 LRP6O75581 1613 aa18.45■□□□□ 0.54
RBFOX1-218ENST00000569889 RGL3Q3MIN7 710 aa18.44■□□□□ 0.54
RBFOX1-218ENST00000569889 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
RBFOX1-218ENST00000569889 HFM1A2PYH4 1435 aa18.41■□□□□ 0.54
RBFOX1-218ENST00000569889 MST1RQ04912 1400 aa18.41■□□□□ 0.54
RBFOX1-218ENST00000569889 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
RBFOX1-218ENST00000569889 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-218ENST00000569889 STK26Q9P289 416 aa18.41■□□□□ 0.54
RBFOX1-218ENST00000569889 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
RBFOX1-218ENST00000569889 NALCNQ8IZF0 1738 aa18.4■□□□□ 0.54
RBFOX1-218ENST00000569889 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-218ENST00000569889 ADGRL3Q9HAR2 1447 aa18.39■□□□□ 0.53
RBFOX1-218ENST00000569889 C8orf37Q96NL8 207 aa18.38■□□□□ 0.53
RBFOX1-218ENST00000569889 ORAI2Q96SN7 254 aa18.38■□□□□ 0.53
RBFOX1-218ENST00000569889 DCCP43146 1447 aa18.38■□□□□ 0.53
RBFOX1-218ENST00000569889 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
RBFOX1-218ENST00000569889 RPGRIP1LQ68CZ1 1315 aa18.37■□□□□ 0.53
RBFOX1-218ENST00000569889 ROBO2Q9HCK4 1378 aa18.37■□□□□ 0.53
RBFOX1-218ENST00000569889 NUTM2FA1L443 756 aa18.36■□□□□ 0.53
RBFOX1-218ENST00000569889 PPLO60437 1756 aa18.36■□□□□ 0.53
RBFOX1-218ENST00000569889 RXRBP28702 533 aa18.36■□□□□ 0.53
RBFOX1-218ENST00000569889 AFF2P51816 1311 aa18.36■□□□□ 0.53
RBFOX1-218ENST00000569889 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
RBFOX1-218ENST00000569889 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
RBFOX1-218ENST00000569889 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
RBFOX1-218ENST00000569889 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.53
RBFOX1-218ENST00000569889 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
RBFOX1-218ENST00000569889 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
RBFOX1-218ENST00000569889 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
RBFOX1-218ENST00000569889 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
RBFOX1-218ENST00000569889 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
RBFOX1-218ENST00000569889 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
RBFOX1-218ENST00000569889 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
RBFOX1-218ENST00000569889 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
RBFOX1-218ENST00000569889 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms