RNA–Protein interactions for RNA: ENST00000569812.1

IFT140-211, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-211ENST00000569812 TRIM52Q96A61 297 aa21.52■■□□□ 1.04
IFT140-211ENST00000569812 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
IFT140-211ENST00000569812 LRP6O75581 1613 aa21.51■■□□□ 1.03
IFT140-211ENST00000569812 ZNF772Q68DY9 489 aaPredicted RBP21.51■■□□□ 1.03
IFT140-211ENST00000569812 NKTRP30414 1462 aaKnown RBP21.5■■□□□ 1.03
IFT140-211ENST00000569812 SPATA31A6Q5VVP1 1343 aa21.5■■□□□ 1.03
IFT140-211ENST00000569812 EFCAB6Q5THR3 1501 aa21.49■■□□□ 1.03
IFT140-211ENST00000569812 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
IFT140-211ENST00000569812 PHLPP1O60346 1717 aa21.46■■□□□ 1.03
IFT140-211ENST00000569812 NWD1Q149M9 1564 aa21.46■■□□□ 1.03
IFT140-211ENST00000569812 COL16A1Q07092 1604 aaPredicted RBP21.46■■□□□ 1.03
IFT140-211ENST00000569812 RXRBP28702 533 aa21.44■■□□□ 1.02
IFT140-211ENST00000569812 MEX3CQ5U5Q3 659 aaKnown RBP21.43■■□□□ 1.02
IFT140-211ENST00000569812 KDM5AP29375 1690 aaKnown RBP21.43■■□□□ 1.02
IFT140-211ENST00000569812 KANK1Q14678 1352 aa21.42■■□□□ 1.02
IFT140-211ENST00000569812 NOS1P29475 1434 aa21.4■■□□□ 1.02
IFT140-211ENST00000569812 RRBP1Q9P2E9 1410 aaKnown RBP21.4■■□□□ 1.02
IFT140-211ENST00000569812 BCANQ96GW7 911 aa21.4■■□□□ 1.02
IFT140-211ENST00000569812 UNC13BO14795 1591 aa21.39■■□□□ 1.01
IFT140-211ENST00000569812 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
IFT140-211ENST00000569812 LMTK2Q8IWU2 1503 aa21.38■■□□□ 1.01
IFT140-211ENST00000569812 CDK12Q9NYV4 1490 aaPredicted RBP21.38■■□□□ 1.01
IFT140-211ENST00000569812 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
IFT140-211ENST00000569812 ROCK1Q13464 1354 aa21.37■■□□□ 1.01
IFT140-211ENST00000569812 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
IFT140-211ENST00000569812 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
IFT140-211ENST00000569812 MYO5BQ9ULV0 1848 aa21.35■■□□□ 1.01
IFT140-211ENST00000569812 ZFYVE9O95405 1425 aa21.35■■□□□ 1.01
IFT140-211ENST00000569812 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
IFT140-211ENST00000569812 CADPS2Q86UW7 1296 aa21.34■■□□□ 1.01
IFT140-211ENST00000569812 C19orf44Q9H6X5 657 aa21.34■■□□□ 1.01
IFT140-211ENST00000569812 ADGRB3O60242 1522 aa21.34■■□□□ 1.01
IFT140-211ENST00000569812 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1.01
IFT140-211ENST00000569812 E9PCH4 1651 aa21.33■■□□□ 1
IFT140-211ENST00000569812 NUTM2BA6NNL0 878 aaPredicted RBP21.32■■□□□ 1
IFT140-211ENST00000569812 NUTM2EB1AL46 878 aaPredicted RBP21.32■■□□□ 1
IFT140-211ENST00000569812 NUTM2AQ8IVF1 878 aaPredicted RBP21.32■■□□□ 1
IFT140-211ENST00000569812 AFF2P51816 1311 aa21.31■■□□□ 1
IFT140-211ENST00000569812 IQGAP3Q86VI3 1631 aa21.3■■□□□ 1
IFT140-211ENST00000569812 CHD2O14647 1828 aaKnown RBP21.3■■□□□ 1
IFT140-211ENST00000569812 BRINP3Q76B58 766 aa21.3■■□□□ 1
IFT140-211ENST00000569812 C14orf37Q86TY3 774 aa21.3■■□□□ 1
IFT140-211ENST00000569812 SHPRHQ149N8 1683 aa21.29■■□□□ 1
IFT140-211ENST00000569812 ATF3P18847 181 aa21.29■■□□□ 1
IFT140-211ENST00000569812 RIMS2Q9UQ26 1411 aa21.28■■□□□ 1
IFT140-211ENST00000569812 NUP155O75694 1391 aa21.27■■□□□ 1
IFT140-211ENST00000569812 HDGFP51858 240 aaKnown RBP21.27■■□□□ 1
IFT140-211ENST00000569812 DIP2AQ14689 1571 aa21.27■□□□□ 0.99
IFT140-211ENST00000569812 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
IFT140-211ENST00000569812 QTRT2Q9H974 415 aaKnown RBP21.26■□□□□ 0.99
IFT140-211ENST00000569812 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
IFT140-211ENST00000569812 RGS12O14924 1447 aa21.25■□□□□ 0.99
IFT140-211ENST00000569812 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
IFT140-211ENST00000569812 NAIPQ13075 1403 aa21.24■□□□□ 0.99
IFT140-211ENST00000569812 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.23■□□□□ 0.99
IFT140-211ENST00000569812 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
IFT140-211ENST00000569812 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
IFT140-211ENST00000569812 RPRD2Q5VT52 1461 aaKnown RBP21.2■□□□□ 0.98
IFT140-211ENST00000569812 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
IFT140-211ENST00000569812 NUTM2DQ5VT03 806 aaPredicted RBP21.19■□□□□ 0.98
IFT140-211ENST00000569812 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
IFT140-211ENST00000569812 AMOTL2Q9Y2J4 779 aa21.19■□□□□ 0.98
IFT140-211ENST00000569812 LRRC59Q96AG4 307 aaKnown RBP21.18■□□□□ 0.98
IFT140-211ENST00000569812 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
IFT140-211ENST00000569812 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
IFT140-211ENST00000569812 TMEM131LA2VDJ0 1609 aa21.17■□□□□ 0.98
IFT140-211ENST00000569812 SPHKAPQ2M3C7 1700 aa21.17■□□□□ 0.98
IFT140-211ENST00000569812 EP400Q96L91 3159 aa21.16■□□□□ 0.98
IFT140-211ENST00000569812 ASXL1Q8IXJ9 1541 aa21.14■□□□□ 0.98
IFT140-211ENST00000569812 DCCP43146 1447 aa21.14■□□□□ 0.98
IFT140-211ENST00000569812 HFM1A2PYH4 1435 aa21.13■□□□□ 0.97
IFT140-211ENST00000569812 PNPLA6Q8IY17 1366 aa21.13■□□□□ 0.97
IFT140-211ENST00000569812 DDX17Q92841 729 aaKnown RBP21.13■□□□□ 0.97
IFT140-211ENST00000569812 MST1RQ04912 1400 aa21.12■□□□□ 0.97
IFT140-211ENST00000569812 NGLY1Q96IV0 654 aa21.12■□□□□ 0.97
IFT140-211ENST00000569812 ZRANB1Q9UGI0 708 aa21.12■□□□□ 0.97
IFT140-211ENST00000569812 ATAD2Q6PL18 1390 aa21.1■□□□□ 0.97
IFT140-211ENST00000569812 CLTCL1P53675 1640 aa21.07■□□□□ 0.96
IFT140-211ENST00000569812 ADAMTS2O95450 1211 aa21.07■□□□□ 0.96
IFT140-211ENST00000569812 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
IFT140-211ENST00000569812 TRPM2O94759 1503 aa21.05■□□□□ 0.96
IFT140-211ENST00000569812 NHSL1Q5SYE7 1610 aa21.05■□□□□ 0.96
IFT140-211ENST00000569812 FOXD1Q16676 465 aa21.04■□□□□ 0.96
IFT140-211ENST00000569812 FNBP4Q8N3X1 1017 aaPredicted RBP21.04■□□□□ 0.96
IFT140-211ENST00000569812 USP21Q9UK80 565 aa21.03■□□□□ 0.96
IFT140-211ENST00000569812 TRPC5Q9UL62 973 aaPredicted RBP21.03■□□□□ 0.96
IFT140-211ENST00000569812 KIF1BO60333 1816 aa21.02■□□□□ 0.96
IFT140-211ENST00000569812 CCDC125Q86Z20 511 aa21.01■□□□□ 0.95
IFT140-211ENST00000569812 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
IFT140-211ENST00000569812 METP08581 1390 aa21■□□□□ 0.95
IFT140-211ENST00000569812 SOS2Q07890 1332 aaPredicted RBP20.99■□□□□ 0.95
IFT140-211ENST00000569812 ATRNO75882 1429 aa20.98■□□□□ 0.95
IFT140-211ENST00000569812 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
IFT140-211ENST00000569812 ADGRL3Q9HAR2 1447 aa20.97■□□□□ 0.95
IFT140-211ENST00000569812 ZNF326Q5BKZ1 582 aaKnown RBP20.96■□□□□ 0.95
IFT140-211ENST00000569812 C1orf167Q5SNV9 1468 aa20.95■□□□□ 0.94
IFT140-211ENST00000569812 NRXN3Q9Y4C0 1643 aa20.94■□□□□ 0.94
IFT140-211ENST00000569812 ORAI2Q96SN7 254 aa20.94■□□□□ 0.94
IFT140-211ENST00000569812 PTCH1Q13635 1447 aa20.94■□□□□ 0.94
IFT140-211ENST00000569812 NEXMIFQ5QGS0 1516 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms