RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-223ENST00000569784 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
SCAPER-223ENST00000569784 ARHGAP31Q2M1Z3 1444 aa13.07□□□□□ -0.32
SCAPER-223ENST00000569784 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
SCAPER-223ENST00000569784 ITGAEP38570 1179 aa13.07□□□□□ -0.32
SCAPER-223ENST00000569784 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
SCAPER-223ENST00000569784 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
SCAPER-223ENST00000569784 SYNMO15061 1565 aa13.04□□□□□ -0.32
SCAPER-223ENST00000569784 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
SCAPER-223ENST00000569784 HSPA1LP34931 641 aa13.04□□□□□ -0.32
SCAPER-223ENST00000569784 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
SCAPER-223ENST00000569784 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
SCAPER-223ENST00000569784 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
SCAPER-223ENST00000569784 FKBP8Q14318 412 aa13.03□□□□□ -0.32
SCAPER-223ENST00000569784 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
SCAPER-223ENST00000569784 LTKP29376 864 aa13.02□□□□□ -0.33
SCAPER-223ENST00000569784 IDI1Q13907 227 aa13.02□□□□□ -0.33
SCAPER-223ENST00000569784 ILDR2Q71H61 639 aa13.02□□□□□ -0.33
SCAPER-223ENST00000569784 ADGRL2O95490 1459 aa13.02□□□□□ -0.33
SCAPER-223ENST00000569784 SLIT1O75093 1534 aa13.02□□□□□ -0.33
SCAPER-223ENST00000569784 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
SCAPER-223ENST00000569784 SLC52A1Q9NWF4 448 aa13.01□□□□□ -0.33
SCAPER-223ENST00000569784 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
SCAPER-223ENST00000569784 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
SCAPER-223ENST00000569784 STRCP1A6NGW2 1772 aa13□□□□□ -0.33
SCAPER-223ENST00000569784 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
SCAPER-223ENST00000569784 KDM5AP29375 1690 aaKnown RBP12.99□□□□□ -0.33
SCAPER-223ENST00000569784 ARHGAP23Q9P227 1491 aa12.99□□□□□ -0.33
SCAPER-223ENST00000569784 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
SCAPER-223ENST00000569784 SOCS7O14512 581 aa12.99□□□□□ -0.33
SCAPER-223ENST00000569784 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
SCAPER-223ENST00000569784 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
SCAPER-223ENST00000569784 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
SCAPER-223ENST00000569784 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
SCAPER-223ENST00000569784 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
SCAPER-223ENST00000569784 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
SCAPER-223ENST00000569784 TET3O43151 1660 aa12.98□□□□□ -0.33
SCAPER-223ENST00000569784 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
SCAPER-223ENST00000569784 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
SCAPER-223ENST00000569784 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
SCAPER-223ENST00000569784 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
SCAPER-223ENST00000569784 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
SCAPER-223ENST00000569784 NOS1P29475 1434 aa12.95□□□□□ -0.34
SCAPER-223ENST00000569784 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
SCAPER-223ENST00000569784 KCNA6P17658 529 aa12.94□□□□□ -0.34
SCAPER-223ENST00000569784 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCAPER-223ENST00000569784 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
SCAPER-223ENST00000569784 UNC13BO14795 1591 aa12.94□□□□□ -0.34
SCAPER-223ENST00000569784 NUP155O75694 1391 aa12.94□□□□□ -0.34
SCAPER-223ENST00000569784 ROCK1Q13464 1354 aa12.93□□□□□ -0.34
SCAPER-223ENST00000569784 NUTM2DQ5VT03 806 aaPredicted RBP12.92□□□□□ -0.34
SCAPER-223ENST00000569784 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
SCAPER-223ENST00000569784 RIMS2Q9UQ26 1411 aa12.92□□□□□ -0.34
SCAPER-223ENST00000569784 TMEM94Q12767 1356 aa12.92□□□□□ -0.34
SCAPER-223ENST00000569784 ZNF326Q5BKZ1 582 aaKnown RBP12.91□□□□□ -0.34
SCAPER-223ENST00000569784 E9PCH4 1651 aa12.91□□□□□ -0.34
SCAPER-223ENST00000569784 MSH6P52701 1360 aa12.91□□□□□ -0.34
SCAPER-223ENST00000569784 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
SCAPER-223ENST00000569784 IQGAP3Q86VI3 1631 aa12.9□□□□□ -0.34
SCAPER-223ENST00000569784 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
SCAPER-223ENST00000569784 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
SCAPER-223ENST00000569784 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
SCAPER-223ENST00000569784 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
SCAPER-223ENST00000569784 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
SCAPER-223ENST00000569784 ROBO1Q9Y6N7 1651 aa12.86□□□□□ -0.35
SCAPER-223ENST00000569784 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
SCAPER-223ENST00000569784 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
SCAPER-223ENST00000569784 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
SCAPER-223ENST00000569784 ATF3P18847 181 aa12.84□□□□□ -0.35
SCAPER-223ENST00000569784 TBX22Q9Y458 520 aa12.84□□□□□ -0.35
SCAPER-223ENST00000569784 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
SCAPER-223ENST00000569784 FAM135BQ49AJ0 1406 aa12.84□□□□□ -0.35
SCAPER-223ENST00000569784 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
SCAPER-223ENST00000569784 PROM2Q8N271 834 aa12.83□□□□□ -0.36
SCAPER-223ENST00000569784 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
SCAPER-223ENST00000569784 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
SCAPER-223ENST00000569784 DIP2AQ14689 1571 aa12.82□□□□□ -0.36
SCAPER-223ENST00000569784 TRPM2O94759 1503 aa12.82□□□□□ -0.36
SCAPER-223ENST00000569784 KIF1BO60333 1816 aa12.81□□□□□ -0.36
SCAPER-223ENST00000569784 MEX3CQ5U5Q3 659 aaKnown RBP12.8□□□□□ -0.36
SCAPER-223ENST00000569784 CADPS2Q86UW7 1296 aa12.8□□□□□ -0.36
SCAPER-223ENST00000569784 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
SCAPER-223ENST00000569784 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
SCAPER-223ENST00000569784 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
SCAPER-223ENST00000569784 C19orf44Q9H6X5 657 aa12.78□□□□□ -0.36
SCAPER-223ENST00000569784 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.37
SCAPER-223ENST00000569784 NCOA3Q9Y6Q9 1424 aa12.77□□□□□ -0.37
SCAPER-223ENST00000569784 ADAMTS13Q76LX8 1427 aa12.76□□□□□ -0.37
SCAPER-223ENST00000569784 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
SCAPER-223ENST00000569784 JCADQ9P266 1359 aa12.75□□□□□ -0.37
SCAPER-223ENST00000569784 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
SCAPER-223ENST00000569784 NAIPQ13075 1403 aa12.73□□□□□ -0.37
SCAPER-223ENST00000569784 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
SCAPER-223ENST00000569784 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
SCAPER-223ENST00000569784 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
SCAPER-223ENST00000569784 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
SCAPER-223ENST00000569784 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
SCAPER-223ENST00000569784 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
SCAPER-223ENST00000569784 PTPRUQ92729 1446 aa12.7□□□□□ -0.38
SCAPER-223ENST00000569784 SPATA31A6Q5VVP1 1343 aa12.69□□□□□ -0.38
SCAPER-223ENST00000569784 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms