RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
CDH13-214ENST00000569455 PIP4K2BP78356 416 aa10.82□□□□□ -0.68
CDH13-214ENST00000569455 DCAF11Q8TEB1 546 aa10.82□□□□□ -0.68
CDH13-214ENST00000569455 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
CDH13-214ENST00000569455 SPATA31E1Q6ZUB1 1445 aa10.82□□□□□ -0.68
CDH13-214ENST00000569455 CEP170BQ9Y4F5 1589 aaPredicted RBP10.82□□□□□ -0.68
CDH13-214ENST00000569455 THEMISQ8N1K5 641 aaPredicted RBP10.81□□□□□ -0.68
CDH13-214ENST00000569455 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
CDH13-214ENST00000569455 TOM1O60784 492 aa10.8□□□□□ -0.68
CDH13-214ENST00000569455 NBPF8Q3BBV2 869 aa10.8□□□□□ -0.68
CDH13-214ENST00000569455 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
CDH13-214ENST00000569455 ZNF326Q5BKZ1 582 aaKnown RBP10.8□□□□□ -0.68
CDH13-214ENST00000569455 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
CDH13-214ENST00000569455 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
CDH13-214ENST00000569455 SYNMO15061 1565 aa10.79□□□□□ -0.68
CDH13-214ENST00000569455 KDM2AQ9Y2K7 1162 aa10.79□□□□□ -0.68
CDH13-214ENST00000569455 UGGT1Q9NYU2 1555 aa10.78□□□□□ -0.68
CDH13-214ENST00000569455 PRAG1Q86YV5 1406 aa10.78□□□□□ -0.68
CDH13-214ENST00000569455 EIF4G2P78344 907 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDH13-214ENST00000569455 DIEXFQ68CQ4 756 aaKnown RBP10.78□□□□□ -0.68
CDH13-214ENST00000569455 ADGRB3O60242 1522 aa10.78□□□□□ -0.68
CDH13-214ENST00000569455 CPS1P31327 1500 aa10.78□□□□□ -0.68
CDH13-214ENST00000569455 TRPM1Q7Z4N2 1603 aa10.77□□□□□ -0.68
CDH13-214ENST00000569455 IDI1Q13907 227 aa10.77□□□□□ -0.69
CDH13-214ENST00000569455 UBR1Q8IWV7 1749 aa10.77□□□□□ -0.69
CDH13-214ENST00000569455 IFT172Q9UG01 1749 aa10.77□□□□□ -0.69
CDH13-214ENST00000569455 HDGFP51858 240 aaKnown RBP10.76□□□□□ -0.69
CDH13-214ENST00000569455 MYOM2P54296 1465 aa10.75□□□□□ -0.69
CDH13-214ENST00000569455 LAMC1P11047 1609 aa10.75□□□□□ -0.69
CDH13-214ENST00000569455 RPGRIP1LQ68CZ1 1315 aa10.75□□□□□ -0.69
CDH13-214ENST00000569455 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
CDH13-214ENST00000569455 PPLO60437 1756 aa10.75□□□□□ -0.69
CDH13-214ENST00000569455 SLIT1O75093 1534 aa10.74□□□□□ -0.69
CDH13-214ENST00000569455 CHGAP10645 457 aaKnown RBP10.74□□□□□ -0.69
CDH13-214ENST00000569455 STAG3Q9UJ98 1225 aa10.74□□□□□ -0.69
CDH13-214ENST00000569455 ROCK2O75116 1388 aaKnown RBP10.74□□□□□ -0.69
CDH13-214ENST00000569455 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
CDH13-214ENST00000569455 HSPA5P11021 654 aaKnown RBP10.73□□□□□ -0.69
CDH13-214ENST00000569455 ANKLE2Q86XL3 938 aa10.73□□□□□ -0.69
CDH13-214ENST00000569455 CARD11Q9BXL7 1154 aa10.73□□□□□ -0.69
CDH13-214ENST00000569455 ARHGAP23Q9P227 1491 aa10.73□□□□□ -0.69
CDH13-214ENST00000569455 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
CDH13-214ENST00000569455 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
CDH13-214ENST00000569455 EID1Q9Y6B2 187 aa10.72□□□□□ -0.69
CDH13-214ENST00000569455 USP47Q96K76 1375 aa10.72□□□□□ -0.69
CDH13-214ENST00000569455 TMEM2Q9UHN6 1383 aa10.72□□□□□ -0.69
CDH13-214ENST00000569455 MED14O60244 1454 aa10.72□□□□□ -0.69
CDH13-214ENST00000569455 MYO5BQ9ULV0 1848 aa10.72□□□□□ -0.69
CDH13-214ENST00000569455 GPRASP1Q5JY77 1395 aa10.71□□□□□ -0.69
CDH13-214ENST00000569455 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDH13-214ENST00000569455 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
CDH13-214ENST00000569455 HIRIP3Q9BW71 556 aaPredicted RBP10.7□□□□□ -0.7
CDH13-214ENST00000569455 SCAF11Q99590 1463 aaKnown RBP10.69□□□□□ -0.7
CDH13-214ENST00000569455 NRXN1Q9ULB1 1477 aa10.69□□□□□ -0.7
CDH13-214ENST00000569455 NEXMIFQ5QGS0 1516 aa10.68□□□□□ -0.7
CDH13-214ENST00000569455 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
CDH13-214ENST00000569455 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
CDH13-214ENST00000569455 IQGAP1P46940 1657 aa10.67□□□□□ -0.7
CDH13-214ENST00000569455 TXNDC2Q86VQ3 553 aa10.67□□□□□ -0.7
CDH13-214ENST00000569455 SETBP1Q9Y6X0 1596 aa10.66□□□□□ -0.7
CDH13-214ENST00000569455 NBPF1Q3BBV0 1214 aa10.66□□□□□ -0.7
CDH13-214ENST00000569455 SETD1AO15047 1707 aaKnown RBP10.66□□□□□ -0.7
CDH13-214ENST00000569455 NPHP4O75161 1426 aaPredicted RBP10.66□□□□□ -0.7
CDH13-214ENST00000569455 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
CDH13-214ENST00000569455 RIMS2Q9UQ26 1411 aa10.66□□□□□ -0.7
CDH13-214ENST00000569455 ADGRF5Q8IZF2 1346 aa10.65□□□□□ -0.7
CDH13-214ENST00000569455 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
CDH13-214ENST00000569455 PLEKHG1Q9ULL1 1385 aa10.65□□□□□ -0.71
CDH13-214ENST00000569455 LTKP29376 864 aa10.64□□□□□ -0.71
CDH13-214ENST00000569455 DDX10Q13206 875 aaKnown RBP10.64□□□□□ -0.71
CDH13-214ENST00000569455 SENP3Q9H4L4 574 aaPredicted RBP10.64□□□□□ -0.71
CDH13-214ENST00000569455 CCDC7Q96M83 1385 aa10.64□□□□□ -0.71
CDH13-214ENST00000569455 ST20-MTHFSA0A0A6YYL1 179 aa10.63□□□□□ -0.71
CDH13-214ENST00000569455 POTEAQ6S8J7 498 aa10.63□□□□□ -0.71
CDH13-214ENST00000569455 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
CDH13-214ENST00000569455 WASHC2AQ641Q2 1341 aa10.62□□□□□ -0.71
CDH13-214ENST00000569455 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
CDH13-214ENST00000569455 C14orf93Q9H972 538 aaKnown RBP10.62□□□□□ -0.71
CDH13-214ENST00000569455 PIK3R4Q99570 1358 aa10.62□□□□□ -0.71
CDH13-214ENST00000569455 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
CDH13-214ENST00000569455 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
CDH13-214ENST00000569455 KIF7Q2M1P5 1343 aa10.6□□□□□ -0.71
CDH13-214ENST00000569455 NUTM2DQ5VT03 806 aaPredicted RBP10.59□□□□□ -0.71
CDH13-214ENST00000569455 ADGRB1O14514 1584 aa10.59□□□□□ -0.71
CDH13-214ENST00000569455 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
CDH13-214ENST00000569455 C11orf95C9JLR9 678 aaPredicted RBP10.58□□□□□ -0.72
CDH13-214ENST00000569455 TMF1P82094 1093 aa10.58□□□□□ -0.72
CDH13-214ENST00000569455 MIER1Q8N108 512 aa10.58□□□□□ -0.72
CDH13-214ENST00000569455 STRCP1A6NGW2 1772 aa10.57□□□□□ -0.72
CDH13-214ENST00000569455 CDCA8Q53HL2 280 aa10.57□□□□□ -0.72
CDH13-214ENST00000569455 BCANQ96GW7 911 aa10.57□□□□□ -0.72
CDH13-214ENST00000569455 ADAMTS13Q76LX8 1427 aa10.57□□□□□ -0.72
CDH13-214ENST00000569455 CHD2O14647 1828 aaKnown RBP10.56□□□□□ -0.72
CDH13-214ENST00000569455 ANP32CO43423 234 aa10.56□□□□□ -0.72
CDH13-214ENST00000569455 KCNA6P17658 529 aa10.56□□□□□ -0.72
CDH13-214ENST00000569455 TESK2Q96S53 571 aa10.56□□□□□ -0.72
CDH13-214ENST00000569455 POLR3GLQ9BT43 218 aa10.56□□□□□ -0.72
CDH13-214ENST00000569455 ARHGEF28Q8N1W1 1705 aaKnown RBP10.55□□□□□ -0.72
CDH13-214ENST00000569455 NRXN3Q9Y4C0 1643 aa10.55□□□□□ -0.72
CDH13-214ENST00000569455 SBNO2Q9Y2G9 1366 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms