RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
CCDC113-205ENST00000569374 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
CCDC113-205ENST00000569374 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
CCDC113-205ENST00000569374 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.34
CCDC113-205ENST00000569374 TTBK1Q5TCY1 1321 aaPredicted RBP12.95□□□□□ -0.34
CCDC113-205ENST00000569374 MAPKBP1O60336 1514 aa12.95□□□□□ -0.34
CCDC113-205ENST00000569374 ABCC2Q92887 1545 aa12.94□□□□□ -0.34
CCDC113-205ENST00000569374 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
CCDC113-205ENST00000569374 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
CCDC113-205ENST00000569374 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
CCDC113-205ENST00000569374 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
CCDC113-205ENST00000569374 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
CCDC113-205ENST00000569374 CERKQ8TCT0 537 aa12.93□□□□□ -0.34
CCDC113-205ENST00000569374 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
CCDC113-205ENST00000569374 PCDHGA10Q9Y5H3 936 aa12.93□□□□□ -0.34
CCDC113-205ENST00000569374 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
CCDC113-205ENST00000569374 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
CCDC113-205ENST00000569374 OATP04181 439 aa12.91□□□□□ -0.34
CCDC113-205ENST00000569374 MS4A1P11836 297 aa12.91□□□□□ -0.34
CCDC113-205ENST00000569374 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
CCDC113-205ENST00000569374 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
CCDC113-205ENST00000569374 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
CCDC113-205ENST00000569374 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
CCDC113-205ENST00000569374 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
CCDC113-205ENST00000569374 TMUB1Q9BVT8 246 aa12.87□□□□□ -0.35
CCDC113-205ENST00000569374 PTPRGP23470 1445 aa12.87□□□□□ -0.35
CCDC113-205ENST00000569374 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
CCDC113-205ENST00000569374 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
CCDC113-205ENST00000569374 REPIN1Q9BWE0 567 aaKnown RBP12.85□□□□□ -0.35
CCDC113-205ENST00000569374 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
CCDC113-205ENST00000569374 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
CCDC113-205ENST00000569374 CARMIL2Q6F5E8 1435 aa12.83□□□□□ -0.36
CCDC113-205ENST00000569374 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
CCDC113-205ENST00000569374 ABCA8O94911 1581 aa12.82□□□□□ -0.36
CCDC113-205ENST00000569374 FOSBP53539 338 aa12.82□□□□□ -0.36
CCDC113-205ENST00000569374 SKIV2LQ15477 1246 aaKnown RBP12.82□□□□□ -0.36
CCDC113-205ENST00000569374 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
CCDC113-205ENST00000569374 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
CCDC113-205ENST00000569374 UHRF1BP1LA0JNW5 1464 aa12.82□□□□□ -0.36
CCDC113-205ENST00000569374 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
CCDC113-205ENST00000569374 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
CCDC113-205ENST00000569374 UACAQ9BZF9 1416 aa12.81□□□□□ -0.36
CCDC113-205ENST00000569374 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
CCDC113-205ENST00000569374 KDM6BO15054 1643 aa12.8□□□□□ -0.36
CCDC113-205ENST00000569374 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
CCDC113-205ENST00000569374 KDM5BQ9UGL1 1544 aa12.8□□□□□ -0.36
CCDC113-205ENST00000569374 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
CCDC113-205ENST00000569374 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
CCDC113-205ENST00000569374 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
CCDC113-205ENST00000569374 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
CCDC113-205ENST00000569374 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
CCDC113-205ENST00000569374 DOK7Q18PE1 504 aa12.79□□□□□ -0.36
CCDC113-205ENST00000569374 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
CCDC113-205ENST00000569374 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
CCDC113-205ENST00000569374 FAM217BQ9NTX9 383 aaPredicted RBP12.78□□□□□ -0.36
CCDC113-205ENST00000569374 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
CCDC113-205ENST00000569374 DIXDC1Q155Q3 683 aa12.77□□□□□ -0.37
CCDC113-205ENST00000569374 PADI6Q6TGC4 694 aa12.77□□□□□ -0.37
CCDC113-205ENST00000569374 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
CCDC113-205ENST00000569374 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.37
CCDC113-205ENST00000569374 GLI2P10070 1586 aa12.77□□□□□ -0.37
CCDC113-205ENST00000569374 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
CCDC113-205ENST00000569374 FAM9AQ8IZU1 332 aaPredicted RBP12.76□□□□□ -0.37
CCDC113-205ENST00000569374 KIF21BO75037 1637 aa12.76□□□□□ -0.37
CCDC113-205ENST00000569374 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
CCDC113-205ENST00000569374 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
CCDC113-205ENST00000569374 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
CCDC113-205ENST00000569374 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
CCDC113-205ENST00000569374 A6NJR5 290 aa12.74□□□□□ -0.37
CCDC113-205ENST00000569374 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
CCDC113-205ENST00000569374 PRSS12P56730 875 aa12.72□□□□□ -0.37
CCDC113-205ENST00000569374 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
CCDC113-205ENST00000569374 TTC13Q8NBP0 860 aa12.72□□□□□ -0.37
CCDC113-205ENST00000569374 RAPGEF6Q8TEU7 1601 aa12.72□□□□□ -0.37
CCDC113-205ENST00000569374 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
CCDC113-205ENST00000569374 COL17A1Q9UMD9 1497 aaPredicted RBP12.72□□□□□ -0.37
CCDC113-205ENST00000569374 APBB1O00213 710 aa12.71□□□□□ -0.37
CCDC113-205ENST00000569374 WDR7Q9Y4E6 1490 aa12.71□□□□□ -0.38
CCDC113-205ENST00000569374 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.38
CCDC113-205ENST00000569374 NUDT7P0C024 238 aa12.7□□□□□ -0.38
CCDC113-205ENST00000569374 MCM6Q14566 821 aa12.7□□□□□ -0.38
CCDC113-205ENST00000569374 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
CCDC113-205ENST00000569374 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
CCDC113-205ENST00000569374 CFAP43Q8NDM7 1665 aa12.69□□□□□ -0.38
CCDC113-205ENST00000569374 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
CCDC113-205ENST00000569374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.68□□□□□ -0.38
CCDC113-205ENST00000569374 POTEHQ6S545 545 aa12.68□□□□□ -0.38
CCDC113-205ENST00000569374 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
CCDC113-205ENST00000569374 ARID3AQ99856 593 aa12.68□□□□□ -0.38
CCDC113-205ENST00000569374 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
CCDC113-205ENST00000569374 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
CCDC113-205ENST00000569374 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
CCDC113-205ENST00000569374 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
CCDC113-205ENST00000569374 RAD21O60216 631 aa12.66□□□□□ -0.38
CCDC113-205ENST00000569374 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
CCDC113-205ENST00000569374 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
CCDC113-205ENST00000569374 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
CCDC113-205ENST00000569374 EEA1Q15075 1411 aa12.65□□□□□ -0.38
CCDC113-205ENST00000569374 TRAK2O60296 914 aa12.65□□□□□ -0.38
CCDC113-205ENST00000569374 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms