RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 DIP2BQ9P265 1576 aa10.63□□□□□ -0.71
SPG7-220ENST00000569363 CEP152O94986 1710 aa10.63□□□□□ -0.71
SPG7-220ENST00000569363 SPHKAPQ2M3C7 1700 aa10.63□□□□□ -0.71
SPG7-220ENST00000569363 EIF3AQ14152 1382 aaKnown RBP10.63□□□□□ -0.71
SPG7-220ENST00000569363 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
SPG7-220ENST00000569363 TET3O43151 1660 aa10.63□□□□□ -0.71
SPG7-220ENST00000569363 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
SPG7-220ENST00000569363 KIAA1210Q9ULL0 1709 aa10.62□□□□□ -0.71
SPG7-220ENST00000569363 SYNMO15061 1565 aa10.62□□□□□ -0.71
SPG7-220ENST00000569363 MS4A1P11836 297 aa10.62□□□□□ -0.71
SPG7-220ENST00000569363 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
SPG7-220ENST00000569363 NPC1L1Q9UHC9 1359 aa10.62□□□□□ -0.71
SPG7-220ENST00000569363 TRAPPC8Q9Y2L5 1435 aa10.61□□□□□ -0.71
SPG7-220ENST00000569363 PPRC1Q5VV67 1664 aaKnown RBP10.61□□□□□ -0.71
SPG7-220ENST00000569363 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
SPG7-220ENST00000569363 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
SPG7-220ENST00000569363 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
SPG7-220ENST00000569363 INO80Q9ULG1 1556 aaPredicted RBP10.59□□□□□ -0.71
SPG7-220ENST00000569363 PIK3C2GO75747 1445 aa10.58□□□□□ -0.72
SPG7-220ENST00000569363 ASXL1Q8IXJ9 1541 aa10.58□□□□□ -0.72
SPG7-220ENST00000569363 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
SPG7-220ENST00000569363 IPO9Q96P70 1041 aaKnown RBP10.58□□□□□ -0.72
SPG7-220ENST00000569363 CLTCL1P53675 1640 aa10.58□□□□□ -0.72
SPG7-220ENST00000569363 ABCA9Q8IUA7 1624 aa10.58□□□□□ -0.72
SPG7-220ENST00000569363 ATP7AQ04656 1500 aa10.58□□□□□ -0.72
SPG7-220ENST00000569363 MYOM2P54296 1465 aa10.57□□□□□ -0.72
SPG7-220ENST00000569363 WDR43Q15061 677 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPG7-220ENST00000569363 PPP2R1AP30153 589 aa10.56□□□□□ -0.72
SPG7-220ENST00000569363 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
SPG7-220ENST00000569363 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.56□□□□□ -0.72
SPG7-220ENST00000569363 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
SPG7-220ENST00000569363 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
SPG7-220ENST00000569363 FANCAO15360 1455 aa10.55□□□□□ -0.72
SPG7-220ENST00000569363 TSPOAP1O95153 1857 aa10.54□□□□□ -0.72
SPG7-220ENST00000569363 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
SPG7-220ENST00000569363 LMTK2Q8IWU2 1503 aa10.53□□□□□ -0.72
SPG7-220ENST00000569363 ADAMTS8Q9UP79 889 aa10.53□□□□□ -0.72
SPG7-220ENST00000569363 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
SPG7-220ENST00000569363 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
SPG7-220ENST00000569363 AFAP1Q8N556 730 aa10.52□□□□□ -0.73
SPG7-220ENST00000569363 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.73
SPG7-220ENST00000569363 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
SPG7-220ENST00000569363 ADGRL1O94910 1474 aa10.52□□□□□ -0.73
SPG7-220ENST00000569363 SBNO2Q9Y2G9 1366 aa10.52□□□□□ -0.73
SPG7-220ENST00000569363 MYOM1P52179 1685 aa10.51□□□□□ -0.73
SPG7-220ENST00000569363 PDE4AP27815 886 aa10.51□□□□□ -0.73
SPG7-220ENST00000569363 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
SPG7-220ENST00000569363 EFCAB6Q5THR3 1501 aa10.51□□□□□ -0.73
SPG7-220ENST00000569363 KIF1BO60333 1816 aa10.51□□□□□ -0.73
SPG7-220ENST00000569363 MYO3AQ8NEV4 1616 aa10.51□□□□□ -0.73
SPG7-220ENST00000569363 SENP3-EIF4A1A0A087X0R7 540 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 DDRGK1Q96HY6 314 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 CRBNQ96SW2 442 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 BACH2Q9BYV9 841 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 CFAP74Q9C0B2 1584 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
SPG7-220ENST00000569363 NRXN1Q9ULB1 1477 aa10.49□□□□□ -0.73
SPG7-220ENST00000569363 SETBP1Q9Y6X0 1596 aa10.49□□□□□ -0.73
SPG7-220ENST00000569363 ABCA6Q8N139 1617 aa10.49□□□□□ -0.73
SPG7-220ENST00000569363 KIF3BO15066 747 aa10.49□□□□□ -0.73
SPG7-220ENST00000569363 CENPQQ7L2Z9 268 aaPredicted RBP10.49□□□□□ -0.73
SPG7-220ENST00000569363 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
SPG7-220ENST00000569363 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
SPG7-220ENST00000569363 BCL11AQ9H165 835 aa10.48□□□□□ -0.73
SPG7-220ENST00000569363 NINLQ9Y2I6 1382 aa10.48□□□□□ -0.73
SPG7-220ENST00000569363 ERVK-7P63135 1459 aa10.48□□□□□ -0.73
SPG7-220ENST00000569363 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
SPG7-220ENST00000569363 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
SPG7-220ENST00000569363 SLFN5Q08AF3 891 aa10.47□□□□□ -0.73
SPG7-220ENST00000569363 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
SPG7-220ENST00000569363 ZNF518AQ6AHZ1 1483 aa10.47□□□□□ -0.73
SPG7-220ENST00000569363 GLI2P10070 1586 aa10.47□□□□□ -0.73
SPG7-220ENST00000569363 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.73
SPG7-220ENST00000569363 RPGRIP1LQ68CZ1 1315 aa10.46□□□□□ -0.73
SPG7-220ENST00000569363 ADGRB3O60242 1522 aa10.46□□□□□ -0.74
SPG7-220ENST00000569363 NKTRP30414 1462 aaKnown RBP10.45□□□□□ -0.74
SPG7-220ENST00000569363 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
SPG7-220ENST00000569363 KDM2BQ8NHM5 1336 aa10.45□□□□□ -0.74
SPG7-220ENST00000569363 E9PSI1 815 aa10.45□□□□□ -0.74
SPG7-220ENST00000569363 PLIN1O60240 522 aa10.45□□□□□ -0.74
SPG7-220ENST00000569363 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
SPG7-220ENST00000569363 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
SPG7-220ENST00000569363 KIDINS220Q9ULH0 1771 aa10.44□□□□□ -0.74
SPG7-220ENST00000569363 ASXL2Q76L83 1435 aa10.44□□□□□ -0.74
SPG7-220ENST00000569363 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
SPG7-220ENST00000569363 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
SPG7-220ENST00000569363 USP35Q9P2H5 1018 aa10.44□□□□□ -0.74
SPG7-220ENST00000569363 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
SPG7-220ENST00000569363 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
SPG7-220ENST00000569363 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
SPG7-220ENST00000569363 USP32Q8NFA0 1604 aa10.43□□□□□ -0.74
SPG7-220ENST00000569363 MROH2AA6NES4 1674 aa10.42□□□□□ -0.74
SPG7-220ENST00000569363 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
SPG7-220ENST00000569363 AAMPQ13685 434 aa10.42□□□□□ -0.74
SPG7-220ENST00000569363 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
SPG7-220ENST00000569363 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
SPG7-220ENST00000569363 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
SPG7-220ENST00000569363 PDE3AQ14432 1141 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms