RNA–Protein interactions for RNA: ENST00000569304.1

RAB11A-208, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB11A, Length 347 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-208ENST00000569304 SUPT5HO00267 1087 aaKnown RBP8.56□□□□□ -1.04
RAB11A-208ENST00000569304 ARXQ96QS3 562 aa8.56□□□□□ -1.04
RAB11A-208ENST00000569304 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
RAB11A-208ENST00000569304 PTPN5P54829 565 aa8.55□□□□□ -1.04
RAB11A-208ENST00000569304 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
RAB11A-208ENST00000569304 EYA1Q99502 592 aa8.55□□□□□ -1.04
RAB11A-208ENST00000569304 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
RAB11A-208ENST00000569304 FLIIQ13045 1269 aa8.54□□□□□ -1.04
RAB11A-208ENST00000569304 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
RAB11A-208ENST00000569304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.53□□□□□ -1.04
RAB11A-208ENST00000569304 PTPREP23469 700 aa8.53□□□□□ -1.04
RAB11A-208ENST00000569304 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
RAB11A-208ENST00000569304 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
RAB11A-208ENST00000569304 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
RAB11A-208ENST00000569304 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
RAB11A-208ENST00000569304 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
RAB11A-208ENST00000569304 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
RAB11A-208ENST00000569304 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
RAB11A-208ENST00000569304 A0A0G2JS52 829 aa8.49□□□□□ -1.05
RAB11A-208ENST00000569304 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
RAB11A-208ENST00000569304 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
RAB11A-208ENST00000569304 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
RAB11A-208ENST00000569304 NUDT18Q6ZVK8 323 aa8.48□□□□□ -1.05
RAB11A-208ENST00000569304 TATDN2Q93075 761 aa8.48□□□□□ -1.05
RAB11A-208ENST00000569304 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
RAB11A-208ENST00000569304 VPS9D1Q9Y2B5 631 aa8.48□□□□□ -1.05
RAB11A-208ENST00000569304 GOLGA8CPA6NN73 597 aa8.47□□□□□ -1.05
RAB11A-208ENST00000569304 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
RAB11A-208ENST00000569304 CD46P15529 392 aa8.47□□□□□ -1.05
RAB11A-208ENST00000569304 DNAJB2P25686 324 aa8.47□□□□□ -1.05
RAB11A-208ENST00000569304 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
RAB11A-208ENST00000569304 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
RAB11A-208ENST00000569304 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
RAB11A-208ENST00000569304 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
RAB11A-208ENST00000569304 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
RAB11A-208ENST00000569304 MCM6Q14566 821 aa8.44□□□□□ -1.06
RAB11A-208ENST00000569304 PROX2Q3B8N5 592 aa8.44□□□□□ -1.06
RAB11A-208ENST00000569304 THSD4Q6ZMP0 1018 aa8.44□□□□□ -1.06
RAB11A-208ENST00000569304 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
RAB11A-208ENST00000569304 A6NJR5 290 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 WNT2BQ93097 391 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 ZBED2Q9BTP6 218 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
RAB11A-208ENST00000569304 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
RAB11A-208ENST00000569304 SMAPO00193 183 aa8.41□□□□□ -1.06
RAB11A-208ENST00000569304 SPTLC1O15269 473 aa8.41□□□□□ -1.06
RAB11A-208ENST00000569304 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
RAB11A-208ENST00000569304 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
RAB11A-208ENST00000569304 Q6ZNB5 142 aa8.41□□□□□ -1.06
RAB11A-208ENST00000569304 KIAA1468Q9P260 1216 aa8.41□□□□□ -1.06
RAB11A-208ENST00000569304 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
RAB11A-208ENST00000569304 ATP1B4Q9UN42 357 aaPredicted RBP8.4□□□□□ -1.06
RAB11A-208ENST00000569304 GJA5P36382 358 aa8.39□□□□□ -1.07
RAB11A-208ENST00000569304 RFC5P40937 340 aa8.39□□□□□ -1.07
RAB11A-208ENST00000569304 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
RAB11A-208ENST00000569304 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
RAB11A-208ENST00000569304 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
RAB11A-208ENST00000569304 CLUAP1Q96AJ1 413 aa8.39□□□□□ -1.07
RAB11A-208ENST00000569304 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
RAB11A-208ENST00000569304 UBTFP17480 764 aaKnown RBP8.38□□□□□ -1.07
RAB11A-208ENST00000569304 RSBN1LQ6PCB5 846 aaPredicted RBP8.38□□□□□ -1.07
RAB11A-208ENST00000569304 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
RAB11A-208ENST00000569304 MOXD2PA6NHM9 499 aa8.37□□□□□ -1.07
RAB11A-208ENST00000569304 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
RAB11A-208ENST00000569304 BHMG1C9JSJ3 638 aaPredicted RBP8.37□□□□□ -1.07
RAB11A-208ENST00000569304 TMEM259Q4ZIN3 620 aa8.37□□□□□ -1.07
RAB11A-208ENST00000569304 TRAK2O60296 914 aa8.36□□□□□ -1.07
RAB11A-208ENST00000569304 KDM4AO75164 1064 aa8.35□□□□□ -1.07
RAB11A-208ENST00000569304 GCGRP47871 477 aa8.35□□□□□ -1.07
RAB11A-208ENST00000569304 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
RAB11A-208ENST00000569304 APBB1O00213 710 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 LILRB3O75022 631 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 SLC10A3P09131 477 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 NDUFV2P19404 249 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 RSPH4AQ5TD94 716 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 RDH13Q8NBN7 331 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 SNRKQ9NRH2 765 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
RAB11A-208ENST00000569304 ARID3CA6NKF2 412 aa8.33□□□□□ -1.08
RAB11A-208ENST00000569304 USP46P62068 366 aa8.33□□□□□ -1.08
RAB11A-208ENST00000569304 QPCTQ16769 361 aa8.33□□□□□ -1.08
RAB11A-208ENST00000569304 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
RAB11A-208ENST00000569304 FNBP4Q8N3X1 1017 aaPredicted RBP8.33□□□□□ -1.08
RAB11A-208ENST00000569304 POM121Q96HA1 1249 aa8.33□□□□□ -1.08
RAB11A-208ENST00000569304 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
RAB11A-208ENST00000569304 HOXA2O43364 376 aa8.31□□□□□ -1.08
RAB11A-208ENST00000569304 FAM98CQ17RN3 349 aaKnown RBP8.31□□□□□ -1.08
RAB11A-208ENST00000569304 PRPF38BQ5VTL8 546 aaKnown RBP8.31□□□□□ -1.08
RAB11A-208ENST00000569304 PROSER2Q86WR7 435 aaPredicted RBP8.31□□□□□ -1.08
RAB11A-208ENST00000569304 SOCS7O14512 581 aa8.3□□□□□ -1.08
RAB11A-208ENST00000569304 CSPP1Q1MSJ5 1256 aa8.3□□□□□ -1.08
RAB11A-208ENST00000569304 COG6Q9Y2V7 657 aa8.3□□□□□ -1.08
RAB11A-208ENST00000569304 RAD21O60216 631 aa8.29□□□□□ -1.08
RAB11A-208ENST00000569304 ITGBL1O95965 494 aaPredicted RBP8.29□□□□□ -1.08
RAB11A-208ENST00000569304 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
RAB11A-208ENST00000569304 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
RAB11A-208ENST00000569304 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms