RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
CDH11-216ENST00000569128 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
CDH11-216ENST00000569128 FANCD2Q9BXW9 1451 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 EYA1Q99502 592 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
CDH11-216ENST00000569128 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
CDH11-216ENST00000569128 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
CDH11-216ENST00000569128 TATDN2Q93075 761 aa13.29□□□□□ -0.28
CDH11-216ENST00000569128 PNMA3Q9UL41 463 aa13.29□□□□□ -0.28
CDH11-216ENST00000569128 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
CDH11-216ENST00000569128 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
CDH11-216ENST00000569128 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
CDH11-216ENST00000569128 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
CDH11-216ENST00000569128 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
CDH11-216ENST00000569128 SMAPO00193 183 aa13.27□□□□□ -0.29
CDH11-216ENST00000569128 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
CDH11-216ENST00000569128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.26□□□□□ -0.29
CDH11-216ENST00000569128 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
CDH11-216ENST00000569128 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
CDH11-216ENST00000569128 KIAA1468Q9P260 1216 aa13.25□□□□□ -0.29
CDH11-216ENST00000569128 ONECUT3O60422 494 aaPredicted RBP13.24□□□□□ -0.29
CDH11-216ENST00000569128 ZNF687Q8N1G0 1237 aa13.23□□□□□ -0.29
CDH11-216ENST00000569128 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
CDH11-216ENST00000569128 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
CDH11-216ENST00000569128 PBX2P40425 430 aa13.22□□□□□ -0.29
CDH11-216ENST00000569128 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
CDH11-216ENST00000569128 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
CDH11-216ENST00000569128 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
CDH11-216ENST00000569128 DNAJB2P25686 324 aa13.21□□□□□ -0.29
CDH11-216ENST00000569128 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
CDH11-216ENST00000569128 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
CDH11-216ENST00000569128 LCE2DQ5TA82 110 aaPredicted RBP13.19□□□□□ -0.3
CDH11-216ENST00000569128 CUX1P39880 1505 aa13.18□□□□□ -0.3
CDH11-216ENST00000569128 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
CDH11-216ENST00000569128 RABGEF1Q9UJ41 708 aa13.18□□□□□ -0.3
CDH11-216ENST00000569128 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
CDH11-216ENST00000569128 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
CDH11-216ENST00000569128 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
CDH11-216ENST00000569128 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
CDH11-216ENST00000569128 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
CDH11-216ENST00000569128 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
CDH11-216ENST00000569128 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
CDH11-216ENST00000569128 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
CDH11-216ENST00000569128 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
CDH11-216ENST00000569128 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
CDH11-216ENST00000569128 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
CDH11-216ENST00000569128 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
CDH11-216ENST00000569128 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
CDH11-216ENST00000569128 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
CDH11-216ENST00000569128 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
CDH11-216ENST00000569128 CD46P15529 392 aa13.1□□□□□ -0.31
CDH11-216ENST00000569128 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
CDH11-216ENST00000569128 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
CDH11-216ENST00000569128 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
CDH11-216ENST00000569128 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
CDH11-216ENST00000569128 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
CDH11-216ENST00000569128 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
CDH11-216ENST00000569128 POLR3EQ9NVU0 708 aa13.08□□□□□ -0.32
CDH11-216ENST00000569128 WDR62O43379 1518 aa13.08□□□□□ -0.32
CDH11-216ENST00000569128 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH11-216ENST00000569128 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
CDH11-216ENST00000569128 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
CDH11-216ENST00000569128 TK2O00142 265 aa13.06□□□□□ -0.32
CDH11-216ENST00000569128 MYSM1Q5VVJ2 828 aa13.06□□□□□ -0.32
CDH11-216ENST00000569128 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
CDH11-216ENST00000569128 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
CDH11-216ENST00000569128 POLA1P09884 1462 aaPredicted RBP13.04□□□□□ -0.32
CDH11-216ENST00000569128 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
CDH11-216ENST00000569128 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
CDH11-216ENST00000569128 HDGFP51858 240 aaKnown RBP13.04□□□□□ -0.32
CDH11-216ENST00000569128 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
CDH11-216ENST00000569128 SPIRE2Q8WWL2 714 aa13.04□□□□□ -0.32
CDH11-216ENST00000569128 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
CDH11-216ENST00000569128 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
CDH11-216ENST00000569128 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
CDH11-216ENST00000569128 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.33
CDH11-216ENST00000569128 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
CDH11-216ENST00000569128 SOGA1O94964 1423 aa13.02□□□□□ -0.33
CDH11-216ENST00000569128 CUX2O14529 1486 aa13.02□□□□□ -0.33
CDH11-216ENST00000569128 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
CDH11-216ENST00000569128 SLC10A3P09131 477 aa13□□□□□ -0.33
CDH11-216ENST00000569128 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
CDH11-216ENST00000569128 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
CDH11-216ENST00000569128 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
CDH11-216ENST00000569128 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
CDH11-216ENST00000569128 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
CDH11-216ENST00000569128 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
CDH11-216ENST00000569128 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
CDH11-216ENST00000569128 HRO43593 1189 aa12.97□□□□□ -0.33
CDH11-216ENST00000569128 RNF40O75150 1001 aa12.97□□□□□ -0.33
CDH11-216ENST00000569128 GCGRP47871 477 aa12.97□□□□□ -0.33
CDH11-216ENST00000569128 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
CDH11-216ENST00000569128 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
CDH11-216ENST00000569128 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
CDH11-216ENST00000569128 KDM4AO75164 1064 aa12.96□□□□□ -0.33
CDH11-216ENST00000569128 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms