RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 MOXD2PA6NHM9 499 aa10.98□□□□□ -0.65
UBR1-208ENST00000569066 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
UBR1-208ENST00000569066 TRAK2O60296 914 aa10.98□□□□□ -0.65
UBR1-208ENST00000569066 QPCTQ16769 361 aa10.98□□□□□ -0.65
UBR1-208ENST00000569066 A6NJR5 290 aa10.97□□□□□ -0.65
UBR1-208ENST00000569066 NDUFV2P19404 249 aa10.97□□□□□ -0.65
UBR1-208ENST00000569066 PSEN2P49810 448 aa10.97□□□□□ -0.65
UBR1-208ENST00000569066 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
UBR1-208ENST00000569066 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
UBR1-208ENST00000569066 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
UBR1-208ENST00000569066 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
UBR1-208ENST00000569066 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
UBR1-208ENST00000569066 RSBN1LQ6PCB5 846 aaPredicted RBP10.94□□□□□ -0.66
UBR1-208ENST00000569066 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
UBR1-208ENST00000569066 PROSER2Q86WR7 435 aaPredicted RBP10.93□□□□□ -0.66
UBR1-208ENST00000569066 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
UBR1-208ENST00000569066 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
UBR1-208ENST00000569066 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
UBR1-208ENST00000569066 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
UBR1-208ENST00000569066 RDH13Q8NBN7 331 aa10.93□□□□□ -0.66
UBR1-208ENST00000569066 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
UBR1-208ENST00000569066 SEPT9Q9UHD8 586 aaPredicted RBP10.93□□□□□ -0.66
UBR1-208ENST00000569066 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
UBR1-208ENST00000569066 HLA-CQ95604 372 aa10.92□□□□□ -0.66
UBR1-208ENST00000569066 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
UBR1-208ENST00000569066 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
UBR1-208ENST00000569066 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
UBR1-208ENST00000569066 SPTLC1O15269 473 aa10.91□□□□□ -0.66
UBR1-208ENST00000569066 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
UBR1-208ENST00000569066 SPDYE5A6NIY4 337 aa10.91□□□□□ -0.66
UBR1-208ENST00000569066 PPP2R2DQ66LE6 453 aa10.91□□□□□ -0.66
UBR1-208ENST00000569066 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
UBR1-208ENST00000569066 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
UBR1-208ENST00000569066 GUCA2AQ02747 115 aa10.89□□□□□ -0.67
UBR1-208ENST00000569066 SNPHO15079 494 aa10.89□□□□□ -0.67
UBR1-208ENST00000569066 SLC10A3P09131 477 aa10.89□□□□□ -0.67
UBR1-208ENST00000569066 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
UBR1-208ENST00000569066 DMRTA1Q5VZB9 504 aa10.88□□□□□ -0.67
UBR1-208ENST00000569066 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
UBR1-208ENST00000569066 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
UBR1-208ENST00000569066 GDPD2Q9HCC8 539 aa10.87□□□□□ -0.67
UBR1-208ENST00000569066 KDM4AO75164 1064 aa10.87□□□□□ -0.67
UBR1-208ENST00000569066 RAD21O60216 631 aa10.86□□□□□ -0.67
UBR1-208ENST00000569066 LILRB3O75022 631 aa10.86□□□□□ -0.67
UBR1-208ENST00000569066 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
UBR1-208ENST00000569066 HOXA2O43364 376 aa10.84□□□□□ -0.67
UBR1-208ENST00000569066 AP1G2O75843 785 aa10.84□□□□□ -0.67
UBR1-208ENST00000569066 BANK1Q8NDB2 785 aa10.84□□□□□ -0.67
UBR1-208ENST00000569066 GCGRP47871 477 aa10.83□□□□□ -0.68
UBR1-208ENST00000569066 MARVELD3Q96A59 401 aa10.83□□□□□ -0.68
UBR1-208ENST00000569066 HRCP23327 699 aa10.83□□□□□ -0.68
UBR1-208ENST00000569066 TMEM259Q4ZIN3 620 aa10.83□□□□□ -0.68
UBR1-208ENST00000569066 KCNH8Q96L42 1107 aa10.83□□□□□ -0.68
UBR1-208ENST00000569066 ERBB3P21860 1342 aa10.82□□□□□ -0.68
UBR1-208ENST00000569066 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
UBR1-208ENST00000569066 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
UBR1-208ENST00000569066 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
UBR1-208ENST00000569066 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
UBR1-208ENST00000569066 TUSC1Q2TAM9 212 aa10.82□□□□□ -0.68
UBR1-208ENST00000569066 TBC1D2BQ9UPU7 963 aa10.82□□□□□ -0.68
UBR1-208ENST00000569066 RABGEF1Q9UJ41 708 aa10.81□□□□□ -0.68
UBR1-208ENST00000569066 ARHGAP33O14559 1287 aa10.81□□□□□ -0.68
UBR1-208ENST00000569066 USP17L8P0C7I0 530 aa10.81□□□□□ -0.68
UBR1-208ENST00000569066 FDX1P10109 184 aa10.8□□□□□ -0.68
UBR1-208ENST00000569066 ABL2P42684 1182 aa10.79□□□□□ -0.68
UBR1-208ENST00000569066 SAMD7Q7Z3H4 446 aa10.79□□□□□ -0.68
UBR1-208ENST00000569066 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
UBR1-208ENST00000569066 ZNF330Q9Y3S2 320 aaPredicted RBP10.79□□□□□ -0.68
UBR1-208ENST00000569066 FUT2Q10981 343 aa10.78□□□□□ -0.68
UBR1-208ENST00000569066 ST18O60284 1047 aa10.78□□□□□ -0.68
UBR1-208ENST00000569066 RNF40O75150 1001 aa10.78□□□□□ -0.68
UBR1-208ENST00000569066 GJA5P36382 358 aa10.78□□□□□ -0.68
UBR1-208ENST00000569066 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
UBR1-208ENST00000569066 POM121CA8CG34 1229 aa10.77□□□□□ -0.69
UBR1-208ENST00000569066 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
UBR1-208ENST00000569066 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
UBR1-208ENST00000569066 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
UBR1-208ENST00000569066 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
UBR1-208ENST00000569066 ZBTB3Q9H5J0 574 aa10.76□□□□□ -0.69
UBR1-208ENST00000569066 TSC1Q92574 1164 aa10.75□□□□□ -0.69
UBR1-208ENST00000569066 GJD4Q96KN9 370 aaPredicted RBP10.75□□□□□ -0.69
UBR1-208ENST00000569066 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
UBR1-208ENST00000569066 EMP3P54852 163 aa10.74□□□□□ -0.69
UBR1-208ENST00000569066 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
UBR1-208ENST00000569066 CFHP08603 1231 aa10.74□□□□□ -0.69
UBR1-208ENST00000569066 USP46P62068 366 aa10.74□□□□□ -0.69
UBR1-208ENST00000569066 PRPF38BQ5VTL8 546 aaKnown RBP10.74□□□□□ -0.69
UBR1-208ENST00000569066 CFAP99D6REC4 459 aa10.73□□□□□ -0.69
UBR1-208ENST00000569066 GPR37L1O60883 481 aa10.73□□□□□ -0.69
UBR1-208ENST00000569066 LRRN4Q8WUT4 740 aa10.73□□□□□ -0.69
UBR1-208ENST00000569066 POTEB3A0JP26 581 aa10.72□□□□□ -0.69
UBR1-208ENST00000569066 POTEBQ6S5H4 581 aa10.72□□□□□ -0.69
UBR1-208ENST00000569066 PODXL2Q9NZ53 605 aa10.72□□□□□ -0.69
UBR1-208ENST00000569066 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
UBR1-208ENST00000569066 MTMR2Q13614 643 aa10.71□□□□□ -0.69
UBR1-208ENST00000569066 RSPH4AQ5TD94 716 aa10.71□□□□□ -0.69
UBR1-208ENST00000569066 EPS8L1Q8TE68 723 aa10.71□□□□□ -0.69
UBR1-208ENST00000569066 CCDC97Q96F63 343 aaPredicted RBP10.71□□□□□ -0.69
UBR1-208ENST00000569066 TRIM34Q9BYJ4 488 aa10.7□□□□□ -0.7
UBR1-208ENST00000569066 C6orf229H3BNL8 230 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms