RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.43
GGA2-213ENST00000568922 USP47Q96K76 1375 aa17.76■□□□□ 0.43
GGA2-213ENST00000568922 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
GGA2-213ENST00000568922 KDM5AP29375 1690 aaKnown RBP17.74■□□□□ 0.43
GGA2-213ENST00000568922 POLR1AO95602 1720 aaPredicted RBP17.73■□□□□ 0.43
GGA2-213ENST00000568922 TNRQ92752 1358 aa17.73■□□□□ 0.43
GGA2-213ENST00000568922 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
GGA2-213ENST00000568922 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
GGA2-213ENST00000568922 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
GGA2-213ENST00000568922 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
GGA2-213ENST00000568922 STAG3Q9UJ98 1225 aa17.71■□□□□ 0.43
GGA2-213ENST00000568922 VGFO15240 615 aaPredicted RBP17.7■□□□□ 0.42
GGA2-213ENST00000568922 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
GGA2-213ENST00000568922 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
GGA2-213ENST00000568922 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
GGA2-213ENST00000568922 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
GGA2-213ENST00000568922 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
GGA2-213ENST00000568922 SETBP1Q9Y6X0 1596 aa17.68■□□□□ 0.42
GGA2-213ENST00000568922 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
GGA2-213ENST00000568922 CEBPAP49715 358 aaPredicted RBP17.65■□□□□ 0.42
GGA2-213ENST00000568922 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
GGA2-213ENST00000568922 SCAF11Q99590 1463 aaKnown RBP17.65■□□□□ 0.42
GGA2-213ENST00000568922 ST20-MTHFSA0A0A6YYL1 179 aa17.64■□□□□ 0.41
GGA2-213ENST00000568922 C14orf93Q9H972 538 aaKnown RBP17.64■□□□□ 0.41
GGA2-213ENST00000568922 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
GGA2-213ENST00000568922 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
GGA2-213ENST00000568922 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
GGA2-213ENST00000568922 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
GGA2-213ENST00000568922 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
GGA2-213ENST00000568922 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
GGA2-213ENST00000568922 C11orf95C9JLR9 678 aaPredicted RBP17.61■□□□□ 0.41
GGA2-213ENST00000568922 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
GGA2-213ENST00000568922 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
GGA2-213ENST00000568922 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
GGA2-213ENST00000568922 HDGFP51858 240 aaKnown RBP17.6■□□□□ 0.41
GGA2-213ENST00000568922 KIF7Q2M1P5 1343 aa17.59■□□□□ 0.41
GGA2-213ENST00000568922 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
GGA2-213ENST00000568922 TMEM2Q9UHN6 1383 aa17.57■□□□□ 0.4
GGA2-213ENST00000568922 ALKQ9UM73 1620 aa17.56■□□□□ 0.4
GGA2-213ENST00000568922 TESK2Q96S53 571 aa17.54■□□□□ 0.4
GGA2-213ENST00000568922 CEP170BQ9Y4F5 1589 aaPredicted RBP17.54■□□□□ 0.4
GGA2-213ENST00000568922 SLIT1O75093 1534 aa17.53■□□□□ 0.4
GGA2-213ENST00000568922 ZNF142P52746 1687 aaPredicted RBP17.53■□□□□ 0.4
GGA2-213ENST00000568922 ASXL1Q8IXJ9 1541 aa17.53■□□□□ 0.4
GGA2-213ENST00000568922 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
GGA2-213ENST00000568922 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
GGA2-213ENST00000568922 MIER1Q8N108 512 aa17.52■□□□□ 0.4
GGA2-213ENST00000568922 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.4
GGA2-213ENST00000568922 NRXN3Q9Y4C0 1643 aa17.52■□□□□ 0.4
GGA2-213ENST00000568922 SETD1BQ9UPS6 1966 aaKnown RBP17.52■□□□□ 0.39
GGA2-213ENST00000568922 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
GGA2-213ENST00000568922 TMF1P82094 1093 aa17.51■□□□□ 0.39
GGA2-213ENST00000568922 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
GGA2-213ENST00000568922 THEMISQ8N1K5 641 aaPredicted RBP17.51■□□□□ 0.39
GGA2-213ENST00000568922 PTPRMP28827 1452 aa17.51■□□□□ 0.39
GGA2-213ENST00000568922 SBNO2Q9Y2G9 1366 aa17.49■□□□□ 0.39
GGA2-213ENST00000568922 QRICH2Q9H0J4 1663 aa17.49■□□□□ 0.39
GGA2-213ENST00000568922 TRAK1Q9UPV9 953 aa17.49■□□□□ 0.39
GGA2-213ENST00000568922 DISP3Q9P2K9 1392 aa17.48■□□□□ 0.39
GGA2-213ENST00000568922 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
GGA2-213ENST00000568922 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
GGA2-213ENST00000568922 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
GGA2-213ENST00000568922 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
GGA2-213ENST00000568922 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
GGA2-213ENST00000568922 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
GGA2-213ENST00000568922 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
GGA2-213ENST00000568922 LTKP29376 864 aa17.44■□□□□ 0.38
GGA2-213ENST00000568922 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
GGA2-213ENST00000568922 ANP32CO43423 234 aa17.44■□□□□ 0.38
GGA2-213ENST00000568922 DLC1Q96QB1 1528 aa17.44■□□□□ 0.38
GGA2-213ENST00000568922 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
GGA2-213ENST00000568922 LRPPRCP42704 1394 aaKnown RBP17.43■□□□□ 0.38
GGA2-213ENST00000568922 BCANQ96GW7 911 aa17.42■□□□□ 0.38
GGA2-213ENST00000568922 ADAMTS13Q76LX8 1427 aa17.42■□□□□ 0.38
GGA2-213ENST00000568922 STK26Q9P289 416 aa17.41■□□□□ 0.38
GGA2-213ENST00000568922 DIP2AQ14689 1571 aa17.41■□□□□ 0.38
GGA2-213ENST00000568922 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
GGA2-213ENST00000568922 MED14O60244 1454 aa17.4■□□□□ 0.38
GGA2-213ENST00000568922 METP08581 1390 aa17.39■□□□□ 0.38
GGA2-213ENST00000568922 TECPR2O15040 1411 aa17.37■□□□□ 0.37
GGA2-213ENST00000568922 MYOM1P52179 1685 aa17.37■□□□□ 0.37
GGA2-213ENST00000568922 CPS1P31327 1500 aa17.37■□□□□ 0.37
GGA2-213ENST00000568922 ANKLE2Q86XL3 938 aa17.36■□□□□ 0.37
GGA2-213ENST00000568922 POGKQ9P215 609 aa17.36■□□□□ 0.37
GGA2-213ENST00000568922 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
GGA2-213ENST00000568922 SIRT1Q96EB6 747 aa17.35■□□□□ 0.37
GGA2-213ENST00000568922 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
GGA2-213ENST00000568922 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
GGA2-213ENST00000568922 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
GGA2-213ENST00000568922 TULP4Q9NRJ4 1543 aa17.34■□□□□ 0.37
GGA2-213ENST00000568922 FAM135BQ49AJ0 1406 aa17.34■□□□□ 0.37
GGA2-213ENST00000568922 CCER2I3L3R5 266 aa17.33■□□□□ 0.36
GGA2-213ENST00000568922 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
GGA2-213ENST00000568922 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
GGA2-213ENST00000568922 KDM4FA0A1W2PPD8 638 aa17.31■□□□□ 0.36
GGA2-213ENST00000568922 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
GGA2-213ENST00000568922 PANK3Q9H999 370 aa17.31■□□□□ 0.36
GGA2-213ENST00000568922 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
GGA2-213ENST00000568922 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
GGA2-213ENST00000568922 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms