RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
CDH13-211ENST00000568770 GOLGA3Q08378 1498 aa9.74□□□□□ -0.85
CDH13-211ENST00000568770 BCORL1Q5H9F3 1711 aa9.74□□□□□ -0.85
CDH13-211ENST00000568770 MADDQ8WXG6 1647 aa9.74□□□□□ -0.85
CDH13-211ENST00000568770 OSBPP22059 807 aa9.73□□□□□ -0.85
CDH13-211ENST00000568770 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
CDH13-211ENST00000568770 ABCA9Q8IUA7 1624 aa9.73□□□□□ -0.85
CDH13-211ENST00000568770 PCF11O94913 1555 aaKnown RBP9.71□□□□□ -0.85
CDH13-211ENST00000568770 RIMS1Q86UR5 1692 aaKnown RBP9.71□□□□□ -0.85
CDH13-211ENST00000568770 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.86
CDH13-211ENST00000568770 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
CDH13-211ENST00000568770 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
CDH13-211ENST00000568770 SNPHO15079 494 aa9.7□□□□□ -0.86
CDH13-211ENST00000568770 LMTK3Q96Q04 1460 aa9.7□□□□□ -0.86
CDH13-211ENST00000568770 ARID3CA6NKF2 412 aa9.69□□□□□ -0.86
CDH13-211ENST00000568770 FRMPD1Q5SYB0 1578 aa9.69□□□□□ -0.86
CDH13-211ENST00000568770 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
CDH13-211ENST00000568770 ATP10BO94823 1461 aa9.68□□□□□ -0.86
CDH13-211ENST00000568770 TULP1O00294 542 aaPredicted RBP9.68□□□□□ -0.86
CDH13-211ENST00000568770 RAPGEF3O95398 923 aa9.68□□□□□ -0.86
CDH13-211ENST00000568770 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
CDH13-211ENST00000568770 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
CDH13-211ENST00000568770 PHLDB1Q86UU1 1377 aa9.67□□□□□ -0.86
CDH13-211ENST00000568770 ZC3H15Q8WU90 426 aaKnown RBP9.67□□□□□ -0.86
CDH13-211ENST00000568770 RICTORQ6R327 1708 aa9.67□□□□□ -0.86
CDH13-211ENST00000568770 NEO1Q92859 1461 aa9.66□□□□□ -0.86
CDH13-211ENST00000568770 ARID4BQ4LE39 1312 aaPredicted RBP9.66□□□□□ -0.86
CDH13-211ENST00000568770 RAPGEF6Q8TEU7 1601 aa9.65□□□□□ -0.86
CDH13-211ENST00000568770 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
CDH13-211ENST00000568770 ST18O60284 1047 aa9.65□□□□□ -0.86
CDH13-211ENST00000568770 PHF14O94880 888 aa9.65□□□□□ -0.86
CDH13-211ENST00000568770 FOSBP53539 338 aa9.65□□□□□ -0.86
CDH13-211ENST00000568770 SIGLEC1Q9BZZ2 1709 aa9.65□□□□□ -0.87
CDH13-211ENST00000568770 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
CDH13-211ENST00000568770 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
CDH13-211ENST00000568770 ARHGEF40Q8TER5 1519 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 GPR37O15354 613 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 HSPA2P54652 639 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 FAM163AQ96GL9 167 aaPredicted RBP9.63□□□□□ -0.87
CDH13-211ENST00000568770 PRXQ9BXM0 1461 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 FER1L4A9Z1Z3 1794 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 SAMD9Q5K651 1589 aa9.63□□□□□ -0.87
CDH13-211ENST00000568770 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
CDH13-211ENST00000568770 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
CDH13-211ENST00000568770 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
CDH13-211ENST00000568770 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
CDH13-211ENST00000568770 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
CDH13-211ENST00000568770 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
CDH13-211ENST00000568770 EPAS1Q99814 870 aa9.61□□□□□ -0.87
CDH13-211ENST00000568770 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
CDH13-211ENST00000568770 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
CDH13-211ENST00000568770 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
CDH13-211ENST00000568770 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
CDH13-211ENST00000568770 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
CDH13-211ENST00000568770 ZMYND10O75800 440 aa9.59□□□□□ -0.87
CDH13-211ENST00000568770 ZDHHC16Q969W1 377 aa9.59□□□□□ -0.87
CDH13-211ENST00000568770 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
CDH13-211ENST00000568770 FANCAO15360 1455 aa9.59□□□□□ -0.87
CDH13-211ENST00000568770 DENND4BO75064 1496 aaPredicted RBP9.59□□□□□ -0.87
CDH13-211ENST00000568770 PREX1Q8TCU6 1659 aa9.58□□□□□ -0.88
CDH13-211ENST00000568770 MAP3K7O43318 606 aa9.58□□□□□ -0.88
CDH13-211ENST00000568770 NUP153P49790 1475 aaKnown RBP9.58□□□□□ -0.88
CDH13-211ENST00000568770 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
CDH13-211ENST00000568770 ZMYM4Q5VZL5 1548 aa9.57□□□□□ -0.88
CDH13-211ENST00000568770 TTC37Q6PGP7 1564 aa9.57□□□□□ -0.88
CDH13-211ENST00000568770 STRCQ7RTU9 1775 aa9.57□□□□□ -0.88
CDH13-211ENST00000568770 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 ZFYVE16Q7Z3T8 1539 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH13-211ENST00000568770 FECHP22830 423 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
CDH13-211ENST00000568770 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
CDH13-211ENST00000568770 PTGDRQ13258 359 aa9.55□□□□□ -0.88
CDH13-211ENST00000568770 C6orf132Q5T0Z8 1188 aa9.55□□□□□ -0.88
CDH13-211ENST00000568770 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
CDH13-211ENST00000568770 ILDR2Q71H61 639 aa9.55□□□□□ -0.88
CDH13-211ENST00000568770 HECW1Q76N89 1606 aa9.55□□□□□ -0.88
CDH13-211ENST00000568770 DISP3Q9P2K9 1392 aa9.54□□□□□ -0.88
CDH13-211ENST00000568770 MLECQ14165 292 aa9.54□□□□□ -0.88
CDH13-211ENST00000568770 SLC24A3Q9HC58 644 aa9.54□□□□□ -0.88
CDH13-211ENST00000568770 PLEKHD1A6NEE1 506 aa9.53□□□□□ -0.88
CDH13-211ENST00000568770 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
CDH13-211ENST00000568770 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
CDH13-211ENST00000568770 SETD1BQ9UPS6 1966 aaKnown RBP9.53□□□□□ -0.88
CDH13-211ENST00000568770 ERBB3P21860 1342 aa9.53□□□□□ -0.88
CDH13-211ENST00000568770 MAGI2Q86UL8 1455 aa9.53□□□□□ -0.88
CDH13-211ENST00000568770 SOCS7O14512 581 aa9.52□□□□□ -0.89
CDH13-211ENST00000568770 RANGAP1P46060 587 aaPredicted RBP9.52□□□□□ -0.89
CDH13-211ENST00000568770 EMP3P54852 163 aa9.52□□□□□ -0.89
CDH13-211ENST00000568770 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
CDH13-211ENST00000568770 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
CDH13-211ENST00000568770 MYO5CQ9NQX4 1742 aa9.51□□□□□ -0.89
CDH13-211ENST00000568770 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
CDH13-211ENST00000568770 FCHSD2O94868 740 aa9.51□□□□□ -0.89
CDH13-211ENST00000568770 COL9A1P20849 921 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms