RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
TCF4-241ENST00000568740 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
TCF4-241ENST00000568740 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
TCF4-241ENST00000568740 ATP10AO60312 1499 aa11.81□□□□□ -0.52
TCF4-241ENST00000568740 CFAP70Q5T0N1 1121 aa11.8□□□□□ -0.52
TCF4-241ENST00000568740 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
TCF4-241ENST00000568740 E9PCH4 1651 aa11.8□□□□□ -0.52
TCF4-241ENST00000568740 ZMYND15Q9H091 742 aa11.8□□□□□ -0.52
TCF4-241ENST00000568740 MAGI2Q86UL8 1455 aa11.8□□□□□ -0.52
TCF4-241ENST00000568740 ADGRF5Q8IZF2 1346 aa11.8□□□□□ -0.52
TCF4-241ENST00000568740 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
TCF4-241ENST00000568740 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
TCF4-241ENST00000568740 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
TCF4-241ENST00000568740 PRAG1Q86YV5 1406 aa11.79□□□□□ -0.52
TCF4-241ENST00000568740 UBE2Q2Q8WVN8 375 aa11.78□□□□□ -0.52
TCF4-241ENST00000568740 NEO1Q92859 1461 aa11.78□□□□□ -0.52
TCF4-241ENST00000568740 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
TCF4-241ENST00000568740 ARID4BQ4LE39 1312 aaPredicted RBP11.78□□□□□ -0.52
TCF4-241ENST00000568740 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
TCF4-241ENST00000568740 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
TCF4-241ENST00000568740 TMEM132EQ6IEE7 984 aa11.77□□□□□ -0.52
TCF4-241ENST00000568740 PRDM15P57071 1507 aaPredicted RBP11.77□□□□□ -0.52
TCF4-241ENST00000568740 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
TCF4-241ENST00000568740 HECW2Q9P2P5 1572 aa11.76□□□□□ -0.53
TCF4-241ENST00000568740 NPATQ14207 1427 aa11.76□□□□□ -0.53
TCF4-241ENST00000568740 MAP3K4Q9Y6R4 1608 aa11.76□□□□□ -0.53
TCF4-241ENST00000568740 KDM5CP41229 1560 aa11.76□□□□□ -0.53
TCF4-241ENST00000568740 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
TCF4-241ENST00000568740 IDI1Q13907 227 aa11.75□□□□□ -0.53
TCF4-241ENST00000568740 FAM9BQ8IZU0 186 aa11.75□□□□□ -0.53
TCF4-241ENST00000568740 BCORL1Q5H9F3 1711 aa11.75□□□□□ -0.53
TCF4-241ENST00000568740 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
TCF4-241ENST00000568740 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
TCF4-241ENST00000568740 ZNF428Q96B54 188 aa11.74□□□□□ -0.53
TCF4-241ENST00000568740 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
TCF4-241ENST00000568740 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
TCF4-241ENST00000568740 CEP152O94986 1710 aa11.74□□□□□ -0.53
TCF4-241ENST00000568740 PTPRTO14522 1441 aa11.73□□□□□ -0.53
TCF4-241ENST00000568740 RGL2O15211 777 aa11.73□□□□□ -0.53
TCF4-241ENST00000568740 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
TCF4-241ENST00000568740 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
TCF4-241ENST00000568740 PRKRIP1Q9H875 184 aaPredicted RBP11.73□□□□□ -0.53
TCF4-241ENST00000568740 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
TCF4-241ENST00000568740 PPRC1Q5VV67 1664 aaKnown RBP11.72□□□□□ -0.53
TCF4-241ENST00000568740 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
TCF4-241ENST00000568740 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
TCF4-241ENST00000568740 TESK2Q96S53 571 aa11.72□□□□□ -0.53
TCF4-241ENST00000568740 DEPDC5O75140 1603 aa11.72□□□□□ -0.53
TCF4-241ENST00000568740 DISP3Q9P2K9 1392 aa11.71□□□□□ -0.53
TCF4-241ENST00000568740 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
TCF4-241ENST00000568740 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.53
TCF4-241ENST00000568740 BRD2P25440 801 aaKnown RBP11.71□□□□□ -0.54
TCF4-241ENST00000568740 VWDEQ8N2E2 1590 aa11.71□□□□□ -0.54
TCF4-241ENST00000568740 RICTORQ6R327 1708 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 NOS1P29475 1434 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 MRS2Q9HD23 443 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 STK26Q9P289 416 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 TRPM2O94759 1503 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 TET3O43151 1660 aa11.7□□□□□ -0.54
TCF4-241ENST00000568740 CEBPAP49715 358 aaPredicted RBP11.7□□□□□ -0.54
TCF4-241ENST00000568740 CC2D1BQ5T0F9 858 aaKnown RBP11.7□□□□□ -0.54
TCF4-241ENST00000568740 EFCAB6Q5THR3 1501 aa11.69□□□□□ -0.54
TCF4-241ENST00000568740 GLI2P10070 1586 aa11.69□□□□□ -0.54
TCF4-241ENST00000568740 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
TCF4-241ENST00000568740 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
TCF4-241ENST00000568740 ABCC3O15438 1527 aa11.68□□□□□ -0.54
TCF4-241ENST00000568740 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
TCF4-241ENST00000568740 RAD21O60216 631 aa11.67□□□□□ -0.54
TCF4-241ENST00000568740 ESF1Q9H501 851 aaKnown RBP11.67□□□□□ -0.54
TCF4-241ENST00000568740 PANK3Q9H999 370 aa11.67□□□□□ -0.54
TCF4-241ENST00000568740 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
TCF4-241ENST00000568740 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
TCF4-241ENST00000568740 RNF17Q9BXT8 1623 aaKnown RBP11.66□□□□□ -0.54
TCF4-241ENST00000568740 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
TCF4-241ENST00000568740 TMF1P82094 1093 aa11.65□□□□□ -0.54
TCF4-241ENST00000568740 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
TCF4-241ENST00000568740 SIGLEC1Q9BZZ2 1709 aa11.64□□□□□ -0.55
TCF4-241ENST00000568740 GPRASP1Q5JY77 1395 aa11.63□□□□□ -0.55
TCF4-241ENST00000568740 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
TCF4-241ENST00000568740 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
TCF4-241ENST00000568740 TMC1Q8TDI8 760 aa11.61□□□□□ -0.55
TCF4-241ENST00000568740 MADDQ8WXG6 1647 aa11.61□□□□□ -0.55
TCF4-241ENST00000568740 LMTK2Q8IWU2 1503 aa11.61□□□□□ -0.55
TCF4-241ENST00000568740 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
TCF4-241ENST00000568740 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
TCF4-241ENST00000568740 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
TCF4-241ENST00000568740 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
TCF4-241ENST00000568740 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
TCF4-241ENST00000568740 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
TCF4-241ENST00000568740 SYNMO15061 1565 aa11.6□□□□□ -0.55
TCF4-241ENST00000568740 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
TCF4-241ENST00000568740 PDE4CQ08493 712 aa11.59□□□□□ -0.55
TCF4-241ENST00000568740 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
TCF4-241ENST00000568740 APBB1O00213 710 aa11.59□□□□□ -0.55
TCF4-241ENST00000568740 ZMYM3Q14202 1370 aa11.58□□□□□ -0.56
TCF4-241ENST00000568740 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
TCF4-241ENST00000568740 KIF1BO60333 1816 aa11.57□□□□□ -0.56
TCF4-241ENST00000568740 TNNT2P45379 298 aaPredicted RBP11.57□□□□□ -0.56
TCF4-241ENST00000568740 RBM25P49756 843 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms