RNA–Protein interactions for RNA: ENST00000568206.1

HERC2-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-210ENST00000568206 NRXN1Q9ULB1 1477 aa26.73■■□□□ 1.87
HERC2-210ENST00000568206 PREX1Q8TCU6 1659 aa26.72■■□□□ 1.87
HERC2-210ENST00000568206 SLC52A1Q9NWF4 448 aa26.72■■□□□ 1.87
HERC2-210ENST00000568206 IQGAP1P46940 1657 aa26.71■■□□□ 1.87
HERC2-210ENST00000568206 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
HERC2-210ENST00000568206 PPLO60437 1756 aa26.69■■□□□ 1.86
HERC2-210ENST00000568206 SCAF11Q99590 1463 aaKnown RBP26.68■■□□□ 1.86
HERC2-210ENST00000568206 ADGRF5Q8IZF2 1346 aa26.66■■□□□ 1.86
HERC2-210ENST00000568206 POLR3GLQ9BT43 218 aa26.66■■□□□ 1.86
HERC2-210ENST00000568206 CLTCQ00610 1675 aaKnown RBP26.65■■□□□ 1.86
HERC2-210ENST00000568206 EIF3AQ14152 1382 aaKnown RBP26.64■■□□□ 1.86
HERC2-210ENST00000568206 TESK2Q96S53 571 aa26.64■■□□□ 1.86
HERC2-210ENST00000568206 ERVK-7P63135 1459 aa26.64■■□□□ 1.85
HERC2-210ENST00000568206 IDI1Q13907 227 aa26.61■■□□□ 1.85
HERC2-210ENST00000568206 PIK3C2GO75747 1445 aa26.61■■□□□ 1.85
HERC2-210ENST00000568206 SETBP1Q9Y6X0 1596 aa26.61■■□□□ 1.85
HERC2-210ENST00000568206 TMF1P82094 1093 aa26.6■■□□□ 1.85
HERC2-210ENST00000568206 PRKRIP1Q9H875 184 aaPredicted RBP26.6■■□□□ 1.85
HERC2-210ENST00000568206 CFAP70Q5T0N1 1121 aa26.59■■□□□ 1.85
HERC2-210ENST00000568206 NEXMIFQ5QGS0 1516 aa26.58■■□□□ 1.85
HERC2-210ENST00000568206 VGFO15240 615 aaPredicted RBP26.57■■□□□ 1.84
HERC2-210ENST00000568206 TMEM131LA2VDJ0 1609 aa26.57■■□□□ 1.84
HERC2-210ENST00000568206 SPATA31D1Q6ZQQ2 1576 aa26.57■■□□□ 1.84
HERC2-210ENST00000568206 SLC24A1O60721 1099 aa26.56■■□□□ 1.84
HERC2-210ENST00000568206 MLECQ14165 292 aa26.56■■□□□ 1.84
HERC2-210ENST00000568206 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
HERC2-210ENST00000568206 DISP3Q9P2K9 1392 aa26.55■■□□□ 1.84
HERC2-210ENST00000568206 ZFYVE9O95405 1425 aa26.55■■□□□ 1.84
HERC2-210ENST00000568206 FBXO31Q5XUX0 539 aaPredicted RBP26.54■■□□□ 1.84
HERC2-210ENST00000568206 C14orf93Q9H972 538 aaKnown RBP26.53■■□□□ 1.84
HERC2-210ENST00000568206 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
HERC2-210ENST00000568206 CDCA8Q53HL2 280 aa26.51■■□□□ 1.83
HERC2-210ENST00000568206 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
HERC2-210ENST00000568206 MYO3AQ8NEV4 1616 aa26.48■■□□□ 1.83
HERC2-210ENST00000568206 ADGRB1O14514 1584 aa26.47■■□□□ 1.83
HERC2-210ENST00000568206 ZMYM3Q14202 1370 aa26.47■■□□□ 1.83
HERC2-210ENST00000568206 KTN1Q86UP2 1357 aaKnown RBP26.46■■□□□ 1.83
HERC2-210ENST00000568206 STAG3Q9UJ98 1225 aa26.44■■□□□ 1.82
HERC2-210ENST00000568206 SBNO2Q9Y2G9 1366 aa26.44■■□□□ 1.82
HERC2-210ENST00000568206 A2ML1A8K2U0 1454 aa26.39■■□□□ 1.82
HERC2-210ENST00000568206 NUTM2DQ5VT03 806 aaPredicted RBP26.38■■□□□ 1.81
HERC2-210ENST00000568206 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
HERC2-210ENST00000568206 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
HERC2-210ENST00000568206 CENPJQ9HC77 1338 aaPredicted RBP26.37■■□□□ 1.81
HERC2-210ENST00000568206 RALBP1Q15311 655 aa26.37■■□□□ 1.81
HERC2-210ENST00000568206 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
HERC2-210ENST00000568206 PER1O15534 1290 aaPredicted RBP26.35■■□□□ 1.81
HERC2-210ENST00000568206 TMEM132EQ6IEE7 984 aa26.34■■□□□ 1.81
HERC2-210ENST00000568206 PANK3Q9H999 370 aa26.34■■□□□ 1.81
HERC2-210ENST00000568206 TRAK1Q9UPV9 953 aa26.34■■□□□ 1.81
HERC2-210ENST00000568206 TNRQ92752 1358 aa26.34■■□□□ 1.81
HERC2-210ENST00000568206 QRICH2Q9H0J4 1663 aa26.32■■□□□ 1.8
HERC2-210ENST00000568206 CCDC184Q52MB2 194 aa26.31■■□□□ 1.8
HERC2-210ENST00000568206 RIMS2Q9UQ26 1411 aa26.3■■□□□ 1.8
HERC2-210ENST00000568206 ARHGEF28Q8N1W1 1705 aaKnown RBP26.29■■□□□ 1.8
HERC2-210ENST00000568206 MYBBP1AQ9BQG0 1328 aaKnown RBP26.29■■□□□ 1.8
HERC2-210ENST00000568206 MYOM1P52179 1685 aa26.29■■□□□ 1.8
HERC2-210ENST00000568206 PARD3Q8TEW0 1356 aa26.28■■□□□ 1.8
HERC2-210ENST00000568206 ASXL1Q8IXJ9 1541 aa26.27■■□□□ 1.8
HERC2-210ENST00000568206 CNGB1Q14028 1251 aaPredicted RBP26.27■■□□□ 1.8
HERC2-210ENST00000568206 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.27■■□□□ 1.8
HERC2-210ENST00000568206 ALKQ9UM73 1620 aa26.27■■□□□ 1.8
HERC2-210ENST00000568206 HDGFP51858 240 aaKnown RBP26.25■■□□□ 1.79
HERC2-210ENST00000568206 FER1L4A9Z1Z3 1794 aa26.24■■□□□ 1.79
HERC2-210ENST00000568206 BRD4O60885 1362 aaPredicted RBP26.24■■□□□ 1.79
HERC2-210ENST00000568206 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
HERC2-210ENST00000568206 KNSTRNQ9Y448 316 aa26.22■■□□□ 1.79
HERC2-210ENST00000568206 YTHDC2Q9H6S0 1430 aaKnown RBP26.21■■□□□ 1.79
HERC2-210ENST00000568206 HNRNPUQ00839 825 aaKnown RBP eCLIP26.21■■□□□ 1.79
HERC2-210ENST00000568206 FAM9BQ8IZU0 186 aa26.21■■□□□ 1.79
HERC2-210ENST00000568206 UBR1Q8IWV7 1749 aa26.21■■□□□ 1.79
HERC2-210ENST00000568206 TMC1Q8TDI8 760 aa26.21■■□□□ 1.79
HERC2-210ENST00000568206 PUS7Q96PZ0 661 aaKnown RBP26.21■■□□□ 1.79
HERC2-210ENST00000568206 C3P01024 1663 aa26.2■■□□□ 1.78
HERC2-210ENST00000568206 NLRP13Q86W25 1043 aa26.19■■□□□ 1.78
HERC2-210ENST00000568206 EVC2Q86UK5 1308 aa26.17■■□□□ 1.78
HERC2-210ENST00000568206 NPC1L1Q9UHC9 1359 aa26.17■■□□□ 1.78
HERC2-210ENST00000568206 PTPRMP28827 1452 aa26.16■■□□□ 1.78
HERC2-210ENST00000568206 CC2D1BQ5T0F9 858 aaKnown RBP26.16■■□□□ 1.78
HERC2-210ENST00000568206 TMEM2Q9UHN6 1383 aa26.16■■□□□ 1.78
HERC2-210ENST00000568206 SETD1AO15047 1707 aaKnown RBP26.15■■□□□ 1.78
HERC2-210ENST00000568206 STK26Q9P289 416 aa26.15■■□□□ 1.78
HERC2-210ENST00000568206 DLC1Q96QB1 1528 aa26.13■■□□□ 1.77
HERC2-210ENST00000568206 TULP4Q9NRJ4 1543 aa26.13■■□□□ 1.77
HERC2-210ENST00000568206 NRXN3Q9Y4C0 1643 aa26.12■■□□□ 1.77
HERC2-210ENST00000568206 AMER1Q5JTC6 1135 aaPredicted RBP26.12■■□□□ 1.77
HERC2-210ENST00000568206 PNISRQ8TF01 805 aaKnown RBP26.12■■□□□ 1.77
HERC2-210ENST00000568206 CEBPAP49715 358 aaPredicted RBP26.11■■□□□ 1.77
HERC2-210ENST00000568206 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
HERC2-210ENST00000568206 LRPPRCP42704 1394 aaKnown RBP26.11■■□□□ 1.77
HERC2-210ENST00000568206 POGKQ9P215 609 aa26.09■■□□□ 1.77
HERC2-210ENST00000568206 PRAM1Q96QH2 718 aa26.09■■□□□ 1.77
HERC2-210ENST00000568206 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
HERC2-210ENST00000568206 ZBED9Q6R2W3 1325 aa26.06■■□□□ 1.76
HERC2-210ENST00000568206 NINLQ9Y2I6 1382 aa26.06■■□□□ 1.76
HERC2-210ENST00000568206 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
HERC2-210ENST00000568206 SLIT1O75093 1534 aa26.03■■□□□ 1.76
HERC2-210ENST00000568206 CARD14Q9BXL6 1004 aa26.02■■□□□ 1.76
HERC2-210ENST00000568206 PLEKHG1Q9ULL1 1385 aa26.02■■□□□ 1.76
HERC2-210ENST00000568206 ATAD2Q6PL18 1390 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms