RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SMG6Q86US8 1419 aaKnown RBP15.24■□□□□ 0.03
CSPG4P13-202ENST00000567704 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
CSPG4P13-202ENST00000567704 PNISRQ8TF01 805 aaKnown RBP15.24■□□□□ 0.03
CSPG4P13-202ENST00000567704 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
CSPG4P13-202ENST00000567704 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
CSPG4P13-202ENST00000567704 GOLGA6L19H0YKK7 550 aa15.23■□□□□ 0.03
CSPG4P13-202ENST00000567704 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
CSPG4P13-202ENST00000567704 GRPEL1Q9HAV7 217 aa15.23■□□□□ 0.03
CSPG4P13-202ENST00000567704 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
CSPG4P13-202ENST00000567704 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
CSPG4P13-202ENST00000567704 BECN2A8MW95 431 aa15.22■□□□□ 0.03
CSPG4P13-202ENST00000567704 REC8O95072 547 aa15.22■□□□□ 0.03
CSPG4P13-202ENST00000567704 CCDC39Q9UFE4 941 aa15.22■□□□□ 0.03
CSPG4P13-202ENST00000567704 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
CSPG4P13-202ENST00000567704 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
CSPG4P13-202ENST00000567704 CCDC173Q0VFZ6 552 aa15.21■□□□□ 0.03
CSPG4P13-202ENST00000567704 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
CSPG4P13-202ENST00000567704 CCAR2Q8N163 923 aaKnown RBP15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 PDZRN3Q9UPQ7 1066 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 LMOD2Q6P5Q4 547 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 UBE2Q2Q8WVN8 375 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 GGT6Q6P531 493 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
CSPG4P13-202ENST00000567704 MCM4P33991 863 aa15.19■□□□□ 0.02
CSPG4P13-202ENST00000567704 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
CSPG4P13-202ENST00000567704 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-202ENST00000567704 FGD6Q6ZV73 1430 aa15.19■□□□□ 0.02
CSPG4P13-202ENST00000567704 DIAPH3Q9NSV4 1193 aa15.18■□□□□ 0.02
CSPG4P13-202ENST00000567704 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
CSPG4P13-202ENST00000567704 TERF2IPQ9NYB0 399 aa15.17■□□□□ 0.02
CSPG4P13-202ENST00000567704 SF3A1Q15459 793 aaKnown RBP15.17■□□□□ 0.02
CSPG4P13-202ENST00000567704 BCAR3O75815 825 aa15.16■□□□□ 0.02
CSPG4P13-202ENST00000567704 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
CSPG4P13-202ENST00000567704 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
CSPG4P13-202ENST00000567704 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
CSPG4P13-202ENST00000567704 AAMPQ13685 434 aa15.15■□□□□ 0.02
CSPG4P13-202ENST00000567704 GPATCH3Q96I76 525 aa15.15■□□□□ 0.02
CSPG4P13-202ENST00000567704 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
CSPG4P13-202ENST00000567704 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
CSPG4P13-202ENST00000567704 ANO2Q9NQ90 1003 aa15.15■□□□□ 0.02
CSPG4P13-202ENST00000567704 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
CSPG4P13-202ENST00000567704 RUNDC1Q96C34 613 aa15.14■□□□□ 0.01
CSPG4P13-202ENST00000567704 LRRC9Q6ZRR7 1453 aa15.14■□□□□ 0.01
CSPG4P13-202ENST00000567704 H3BQV1 296 aa15.14■□□□□ 0.01
CSPG4P13-202ENST00000567704 IFFO2Q5TF58 517 aa15.14■□□□□ 0.01
CSPG4P13-202ENST00000567704 MPNDQ8N594 471 aa15.14■□□□□ 0.01
CSPG4P13-202ENST00000567704 INTS3Q68E01 1043 aaKnown RBP15.14■□□□□ 0.01
CSPG4P13-202ENST00000567704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 TEX35Q5T0J7 233 aa15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 UQCRHLA0A096LP55 91 aa15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 UQCRHP07919 91 aa15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.13■□□□□ 0.01
CSPG4P13-202ENST00000567704 HMGN5P82970 282 aaKnown RBP15.12■□□□□ 0.01
CSPG4P13-202ENST00000567704 NOC3LQ8WTT2 800 aaKnown RBP15.12■□□□□ 0.01
CSPG4P13-202ENST00000567704 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
CSPG4P13-202ENST00000567704 KIF3BO15066 747 aa15.12■□□□□ 0.01
CSPG4P13-202ENST00000567704 VPS37CA5D8V6 355 aaPredicted RBP15.12■□□□□ 0.01
CSPG4P13-202ENST00000567704 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
CSPG4P13-202ENST00000567704 CDC45O75419 566 aa15.11■□□□□ 0.01
CSPG4P13-202ENST00000567704 RIPK4P57078 832 aa15.11■□□□□ 0.01
CSPG4P13-202ENST00000567704 FAM184AQ8NB25 1140 aa15.11■□□□□ 0.01
CSPG4P13-202ENST00000567704 TPM3P06753 285 aa15.1■□□□□ 0.01
CSPG4P13-202ENST00000567704 GPS2Q13227 327 aa15.1■□□□□ 0.01
CSPG4P13-202ENST00000567704 BICD2Q8TD16 824 aa15.1■□□□□ 0.01
CSPG4P13-202ENST00000567704 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
CSPG4P13-202ENST00000567704 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
CSPG4P13-202ENST00000567704 MBD3O95983 291 aa15.1■□□□□ 0.01
CSPG4P13-202ENST00000567704 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
CSPG4P13-202ENST00000567704 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
CSPG4P13-202ENST00000567704 ZNF644Q9H582 1327 aaPredicted RBP15.09■□□□□ 0.01
CSPG4P13-202ENST00000567704 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
CSPG4P13-202ENST00000567704 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
CSPG4P13-202ENST00000567704 EFCAB2Q5VUJ9 269 aa15.09■□□□□ 0.01
CSPG4P13-202ENST00000567704 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0.01
CSPG4P13-202ENST00000567704 PPP2R1AP30153 589 aa15.08■□□□□ 0
CSPG4P13-202ENST00000567704 TSPY26PQ9H489 355 aa15.08■□□□□ 0
CSPG4P13-202ENST00000567704 ZSCAN30Q86W11 494 aa15.08■□□□□ 0
CSPG4P13-202ENST00000567704 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
CSPG4P13-202ENST00000567704 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
CSPG4P13-202ENST00000567704 RSPH4AQ5TD94 716 aa15.07■□□□□ 0
CSPG4P13-202ENST00000567704 SASS6Q6UVJ0 657 aa15.07■□□□□ 0
CSPG4P13-202ENST00000567704 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
CSPG4P13-202ENST00000567704 CCDC66A2RUB6 948 aa15.06■□□□□ 0
CSPG4P13-202ENST00000567704 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
CSPG4P13-202ENST00000567704 FBXW7Q969H0 707 aa15.05■□□□□ 0
CSPG4P13-202ENST00000567704 ERICH3Q5RHP9 1530 aa15.05■□□□□ 0
CSPG4P13-202ENST00000567704 PTPRGP23470 1445 aa15.05■□□□□ 0
CSPG4P13-202ENST00000567704 NEK4P51957 841 aa15.05■□□□□ 0
CSPG4P13-202ENST00000567704 SETQ01105 290 aaPredicted RBP15.05■□□□□ 0
CSPG4P13-202ENST00000567704 MIA2Q96PC5 1412 aa15.05■□□□□ 0
CSPG4P13-202ENST00000567704 C11orf95C9JLR9 678 aaPredicted RBP15.05■□□□□ -0
CSPG4P13-202ENST00000567704 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ -0
CSPG4P13-202ENST00000567704 TPD52L1Q16890 204 aaPredicted RBP15.04■□□□□ -0
CSPG4P13-202ENST00000567704 MNS1Q8NEH6 495 aa15.04■□□□□ -0
CSPG4P13-202ENST00000567704 HDAC5Q9UQL6 1122 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms