RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 APLP1P51693 650 aa10.78□□□□□ -0.68
NAE1-216ENST00000566663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
NAE1-216ENST00000566663 KCNC4Q03721 635 aa10.76□□□□□ -0.69
NAE1-216ENST00000566663 A0A0G2JS52 829 aa10.75□□□□□ -0.69
NAE1-216ENST00000566663 TJAP1Q5JTD0 557 aa10.74□□□□□ -0.69
NAE1-216ENST00000566663 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
NAE1-216ENST00000566663 MTRQ99707 1265 aa10.73□□□□□ -0.69
NAE1-216ENST00000566663 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
NAE1-216ENST00000566663 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
NAE1-216ENST00000566663 IL21Q9HBE4 155 aa10.72□□□□□ -0.69
NAE1-216ENST00000566663 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
NAE1-216ENST00000566663 SLC10A3P09131 477 aa10.7□□□□□ -0.7
NAE1-216ENST00000566663 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
NAE1-216ENST00000566663 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
NAE1-216ENST00000566663 IRF6O14896 467 aa10.68□□□□□ -0.7
NAE1-216ENST00000566663 CFHP08603 1231 aa10.68□□□□□ -0.7
NAE1-216ENST00000566663 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
NAE1-216ENST00000566663 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
NAE1-216ENST00000566663 ACTN4O43707 911 aaKnown RBP10.66□□□□□ -0.7
NAE1-216ENST00000566663 COPS2P61201 443 aa10.66□□□□□ -0.7
NAE1-216ENST00000566663 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
NAE1-216ENST00000566663 PCDHB3Q9Y5E6 796 aa10.66□□□□□ -0.7
NAE1-216ENST00000566663 RGS20O76081 388 aa10.65□□□□□ -0.7
NAE1-216ENST00000566663 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
NAE1-216ENST00000566663 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
NAE1-216ENST00000566663 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
NAE1-216ENST00000566663 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
NAE1-216ENST00000566663 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
NAE1-216ENST00000566663 ZPR1O75312 459 aa10.61□□□□□ -0.71
NAE1-216ENST00000566663 SULF1Q8IWU6 871 aa10.61□□□□□ -0.71
NAE1-216ENST00000566663 RDH13Q8NBN7 331 aa10.61□□□□□ -0.71
NAE1-216ENST00000566663 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
NAE1-216ENST00000566663 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
NAE1-216ENST00000566663 ZMYND10O75800 440 aa10.59□□□□□ -0.71
NAE1-216ENST00000566663 BARGINQ6ZT62 677 aa10.59□□□□□ -0.71
NAE1-216ENST00000566663 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
NAE1-216ENST00000566663 GCGRP47871 477 aa10.56□□□□□ -0.72
NAE1-216ENST00000566663 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
NAE1-216ENST00000566663 NR1I2O75469 434 aa10.55□□□□□ -0.72
NAE1-216ENST00000566663 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
NAE1-216ENST00000566663 TLL1O43897 1013 aa10.54□□□□□ -0.72
NAE1-216ENST00000566663 FUT2Q10981 343 aa10.53□□□□□ -0.72
NAE1-216ENST00000566663 PUS10Q3MIT2 529 aaKnown RBP10.53□□□□□ -0.72
NAE1-216ENST00000566663 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.53□□□□□ -0.72
NAE1-216ENST00000566663 CD46P15529 392 aa10.52□□□□□ -0.73
NAE1-216ENST00000566663 CLCN1P35523 988 aa10.52□□□□□ -0.73
NAE1-216ENST00000566663 TMUB1Q9BVT8 246 aa10.52□□□□□ -0.73
NAE1-216ENST00000566663 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.73
NAE1-216ENST00000566663 GGCXP38435 758 aa10.51□□□□□ -0.73
NAE1-216ENST00000566663 MORN1Q5T089 497 aa10.51□□□□□ -0.73
NAE1-216ENST00000566663 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
NAE1-216ENST00000566663 SCUBE3Q8IX30 993 aa10.5□□□□□ -0.73
NAE1-216ENST00000566663 ADH1BP00325 375 aa10.49□□□□□ -0.73
NAE1-216ENST00000566663 FAM217BQ9NTX9 383 aaPredicted RBP10.49□□□□□ -0.73
NAE1-216ENST00000566663 AMHR2Q16671 573 aa10.47□□□□□ -0.73
NAE1-216ENST00000566663 BCANQ96GW7 911 aa10.46□□□□□ -0.73
NAE1-216ENST00000566663 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
NAE1-216ENST00000566663 SLC27A5Q9Y2P5 690 aa10.46□□□□□ -0.73
NAE1-216ENST00000566663 RNF223E7ERA6 249 aa10.45□□□□□ -0.74
NAE1-216ENST00000566663 KDM4AO75164 1064 aa10.45□□□□□ -0.74
NAE1-216ENST00000566663 S1PR4O95977 384 aa10.45□□□□□ -0.74
NAE1-216ENST00000566663 PRKD2Q9BZL6 878 aa10.45□□□□□ -0.74
NAE1-216ENST00000566663 GRIPAP1Q4V328 841 aa10.44□□□□□ -0.74
NAE1-216ENST00000566663 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
NAE1-216ENST00000566663 SPSB2Q99619 263 aa10.44□□□□□ -0.74
NAE1-216ENST00000566663 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
NAE1-216ENST00000566663 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
NAE1-216ENST00000566663 USP46P62068 366 aa10.42□□□□□ -0.74
NAE1-216ENST00000566663 AK7Q96M32 723 aa10.42□□□□□ -0.74
NAE1-216ENST00000566663 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
NAE1-216ENST00000566663 SLC6A16Q9GZN6 736 aa10.42□□□□□ -0.74
NAE1-216ENST00000566663 SALL2Q9Y467 1007 aaPredicted RBP10.42□□□□□ -0.74
NAE1-216ENST00000566663 TRIM66O15016 1216 aa10.41□□□□□ -0.74
NAE1-216ENST00000566663 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
NAE1-216ENST00000566663 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
NAE1-216ENST00000566663 SSTR3P32745 418 aaPredicted RBP10.4□□□□□ -0.74
NAE1-216ENST00000566663 ANKLE1Q8NAG6 615 aa10.4□□□□□ -0.74
NAE1-216ENST00000566663 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
NAE1-216ENST00000566663 HOXA2O43364 376 aa10.39□□□□□ -0.75
NAE1-216ENST00000566663 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
NAE1-216ENST00000566663 Q3C1V9 767 aa10.38□□□□□ -0.75
NAE1-216ENST00000566663 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
NAE1-216ENST00000566663 PARP9Q8IXQ6 854 aa10.38□□□□□ -0.75
NAE1-216ENST00000566663 FAM160A2Q8N612 972 aaPredicted RBP10.38□□□□□ -0.75
NAE1-216ENST00000566663 HLA-CQ95604 372 aa10.37□□□□□ -0.75
NAE1-216ENST00000566663 NUTM1Q86Y26 1132 aa10.36□□□□□ -0.75
NAE1-216ENST00000566663 EMID1Q96A84 441 aaPredicted RBP10.36□□□□□ -0.75
NAE1-216ENST00000566663 SLC24A3Q9HC58 644 aa10.36□□□□□ -0.75
NAE1-216ENST00000566663 MSS51Q4VC12 460 aa10.35□□□□□ -0.75
NAE1-216ENST00000566663 SLC19A1P41440 591 aa10.34□□□□□ -0.75
NAE1-216ENST00000566663 PRDM9Q9NQV7 894 aa10.34□□□□□ -0.75
NAE1-216ENST00000566663 GUCA2AQ02747 115 aa10.33□□□□□ -0.76
NAE1-216ENST00000566663 PDE4DQ08499 809 aa10.32□□□□□ -0.76
NAE1-216ENST00000566663 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
NAE1-216ENST00000566663 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
NAE1-216ENST00000566663 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
NAE1-216ENST00000566663 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
NAE1-216ENST00000566663 MS4A1P11836 297 aa10.31□□□□□ -0.76
NAE1-216ENST00000566663 USB1Q9BQ65 265 aaKnown RBP10.31□□□□□ -0.76
NAE1-216ENST00000566663 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms