RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SLF2Q8IX21 1173 aa5.92□□□□□ -1.46
HERPUD1-211ENST00000566550 PRR14Q9BWN1 585 aa5.92□□□□□ -1.46
HERPUD1-211ENST00000566550 SLC19A1P41440 591 aa5.9□□□□□ -1.46
HERPUD1-211ENST00000566550 APLP1P51693 650 aa5.9□□□□□ -1.46
HERPUD1-211ENST00000566550 COPS2P61201 443 aa5.9□□□□□ -1.46
HERPUD1-211ENST00000566550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.9□□□□□ -1.46
HERPUD1-211ENST00000566550 TRIM26Q12899 539 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-211ENST00000566550 NUDT18Q6ZVK8 323 aa5.89□□□□□ -1.47
HERPUD1-211ENST00000566550 NKX2-3Q8TAU0 364 aa5.89□□□□□ -1.47
HERPUD1-211ENST00000566550 KCNV2Q8TDN2 545 aa5.89□□□□□ -1.47
HERPUD1-211ENST00000566550 ZPR1O75312 459 aa5.88□□□□□ -1.47
HERPUD1-211ENST00000566550 PDIA6Q15084 440 aa5.88□□□□□ -1.47
HERPUD1-211ENST00000566550 NPM2Q86SE8 214 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-211ENST00000566550 CADPS2Q86UW7 1296 aa5.88□□□□□ -1.47
HERPUD1-211ENST00000566550 WDR70Q9NW82 654 aa5.88□□□□□ -1.47
HERPUD1-211ENST00000566550 RBM27Q9P2N5 1060 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-211ENST00000566550 MYT1Q01538 1121 aa5.87□□□□□ -1.47
HERPUD1-211ENST00000566550 ZNF598Q86UK7 904 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-211ENST00000566550 ARID3AQ99856 593 aa5.87□□□□□ -1.47
HERPUD1-211ENST00000566550 PRR20EP86478 221 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 PRR20CP86479 221 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 PRR20DP86480 221 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 PRR20BP86481 221 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 PRR20AP86496 221 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 SLC24A3Q9HC58 644 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 PCDHB3Q9Y5E6 796 aa5.86□□□□□ -1.47
HERPUD1-211ENST00000566550 GRXCR2A6NFK2 248 aa5.85□□□□□ -1.47
HERPUD1-211ENST00000566550 SWT1Q5T5J6 900 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-211ENST00000566550 FAM198AQ9UFP1 575 aa5.85□□□□□ -1.47
HERPUD1-211ENST00000566550 FAM187AA6NFU0 413 aa5.84□□□□□ -1.47
HERPUD1-211ENST00000566550 SPRYD7Q5W111 196 aa5.84□□□□□ -1.47
HERPUD1-211ENST00000566550 TREML4Q6UXN2 200 aa5.84□□□□□ -1.47
HERPUD1-211ENST00000566550 ZC3H15Q8WU90 426 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-211ENST00000566550 RNF223E7ERA6 249 aa5.83□□□□□ -1.48
HERPUD1-211ENST00000566550 ZNF697Q5TEC3 545 aa5.83□□□□□ -1.48
HERPUD1-211ENST00000566550 ANKLE1Q8NAG6 615 aa5.83□□□□□ -1.48
HERPUD1-211ENST00000566550 TRIM67Q6ZTA4 783 aa5.82□□□□□ -1.48
HERPUD1-211ENST00000566550 KMT5BQ4FZB7 885 aa5.81□□□□□ -1.48
HERPUD1-211ENST00000566550 C3orf80F5H4A9 247 aa5.8□□□□□ -1.48
HERPUD1-211ENST00000566550 E2F4Q16254 413 aa5.8□□□□□ -1.48
HERPUD1-211ENST00000566550 POTECB2RU33 542 aa5.79□□□□□ -1.48
HERPUD1-211ENST00000566550 HRCP23327 699 aa5.79□□□□□ -1.48
HERPUD1-211ENST00000566550 BLOC1S3Q6QNY0 202 aa5.79□□□□□ -1.48
HERPUD1-211ENST00000566550 RSPH6AQ9H0K4 717 aa5.79□□□□□ -1.48
HERPUD1-211ENST00000566550 TNFRSF10AO00220 468 aa5.78□□□□□ -1.48
HERPUD1-211ENST00000566550 PADI6Q6TGC4 694 aa5.78□□□□□ -1.48
HERPUD1-211ENST00000566550 ZMYND15Q9H091 742 aa5.78□□□□□ -1.48
HERPUD1-211ENST00000566550 STK17AQ9UEE5 414 aa5.78□□□□□ -1.48
HERPUD1-211ENST00000566550 GDF9O60383 454 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 NR1I2O75469 434 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 WFS1O76024 890 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 S1PR4O95977 384 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 OSBPP22059 807 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 INSM1Q01101 510 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 TTC13Q8NBP0 860 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 CDHR5Q9HBB8 845 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 AAASQ9NRG9 546 aa5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 ARIH1Q9Y4X5 557 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-211ENST00000566550 ADH1BP00325 375 aa5.76□□□□□ -1.49
HERPUD1-211ENST00000566550 DNAJB2P25686 324 aa5.76□□□□□ -1.49
HERPUD1-211ENST00000566550 LIAT1Q6ZQX7 453 aa5.76□□□□□ -1.49
HERPUD1-211ENST00000566550 EYA1Q99502 592 aa5.76□□□□□ -1.49
HERPUD1-211ENST00000566550 PPEF1O14829 653 aaPredicted RBP5.75□□□□□ -1.49
HERPUD1-211ENST00000566550 SEMA3EO15041 775 aa5.75□□□□□ -1.49
HERPUD1-211ENST00000566550 PRIM1P49642 420 aaKnown RBP5.75□□□□□ -1.49
HERPUD1-211ENST00000566550 C11orf95C9JLR9 678 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 ST8SIA5O15466 376 aa5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 ACTN4O43707 911 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 TLL1O43897 1013 aa5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 RBM46Q8TBY0 533 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 EMID1Q96A84 441 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 SLC6A16Q9GZN6 736 aa5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 GPBP1L1Q9HC44 474 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-211ENST00000566550 AXIN1O15169 862 aa5.73□□□□□ -1.49
HERPUD1-211ENST00000566550 CD2BP2O95400 341 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-211ENST00000566550 FOXC1Q12948 553 aa5.73□□□□□ -1.49
HERPUD1-211ENST00000566550 RSPH4AQ5TD94 716 aa5.73□□□□□ -1.49
HERPUD1-211ENST00000566550 IL27Q8NEV9 243 aa5.73□□□□□ -1.49
HERPUD1-211ENST00000566550 ARID3CA6NKF2 412 aa5.72□□□□□ -1.49
HERPUD1-211ENST00000566550 CTC1Q2NKJ3 1217 aa5.72□□□□□ -1.49
HERPUD1-211ENST00000566550 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-211ENST00000566550 CYP4X1Q8N118 509 aa5.72□□□□□ -1.49
HERPUD1-211ENST00000566550 CRIPAKQ8N1N5 446 aa5.72□□□□□ -1.49
HERPUD1-211ENST00000566550 CFHP08603 1231 aa5.71□□□□□ -1.5
HERPUD1-211ENST00000566550 ARHGEF1Q92888 912 aaKnown RBP5.71□□□□□ -1.5
HERPUD1-211ENST00000566550 NPDC1Q9NQX5 325 aaPredicted RBP5.71□□□□□ -1.5
HERPUD1-211ENST00000566550 TESPA1A2RU30 521 aaPredicted RBP5.7□□□□□ -1.5
HERPUD1-211ENST00000566550 FAM181BA6NEQ2 426 aa5.7□□□□□ -1.5
HERPUD1-211ENST00000566550 ZMYND10O75800 440 aa5.7□□□□□ -1.5
HERPUD1-211ENST00000566550 RPIAP49247 311 aa5.7□□□□□ -1.5
HERPUD1-211ENST00000566550 C1orf115Q9H7X2 142 aa5.7□□□□□ -1.5
HERPUD1-211ENST00000566550 ZBTB7CA1YPR0 619 aa5.69□□□□□ -1.5
HERPUD1-211ENST00000566550 WIPF1O43516 503 aa5.69□□□□□ -1.5
HERPUD1-211ENST00000566550 AVPP01185 164 aa5.69□□□□□ -1.5
HERPUD1-211ENST00000566550 TMEM134Q9H6X4 195 aa5.69□□□□□ -1.5
HERPUD1-211ENST00000566550 SPSB2Q99619 263 aa5.68□□□□□ -1.5
HERPUD1-211ENST00000566550 PKD2L1Q9P0L9 805 aa5.68□□□□□ -1.5
HERPUD1-211ENST00000566550 GMPR2Q9P2T1 348 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-211ENST00000566550 CCDC9Q9Y3X0 531 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-211ENST00000566550 TTC24A2A3L6 582 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms