RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 KNSTRNQ9Y448 316 aa25.14■■□□□ 1.61
MSLN-207ENST00000566549 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
MSLN-207ENST00000566549 NPATQ14207 1427 aa25.12■■□□□ 1.61
MSLN-207ENST00000566549 HECW2Q9P2P5 1572 aa25.12■■□□□ 1.61
MSLN-207ENST00000566549 CDCA8Q53HL2 280 aa25.11■■□□□ 1.61
MSLN-207ENST00000566549 LMTK2Q8IWU2 1503 aa25.11■■□□□ 1.61
MSLN-207ENST00000566549 MAP3K4Q9Y6R4 1608 aa25.09■■□□□ 1.61
MSLN-207ENST00000566549 MROH2AA6NES4 1674 aa25.09■■□□□ 1.61
MSLN-207ENST00000566549 MYOM2P54296 1465 aa25.09■■□□□ 1.61
MSLN-207ENST00000566549 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
MSLN-207ENST00000566549 NOS1P29475 1434 aa25.09■■□□□ 1.61
MSLN-207ENST00000566549 ABCA6Q8N139 1617 aa25.09■■□□□ 1.61
MSLN-207ENST00000566549 RBM19Q9Y4C8 960 aaKnown RBP25.08■■□□□ 1.61
MSLN-207ENST00000566549 KIF1BO60333 1816 aa25.07■■□□□ 1.6
MSLN-207ENST00000566549 NEURL4Q96JN8 1562 aa25.06■■□□□ 1.6
MSLN-207ENST00000566549 AMER1Q5JTC6 1135 aaPredicted RBP25.05■■□□□ 1.6
MSLN-207ENST00000566549 CFAP65Q6ZU64 1925 aaKnown RBP25.05■■□□□ 1.6
MSLN-207ENST00000566549 NEO1Q92859 1461 aa25.04■■□□□ 1.6
MSLN-207ENST00000566549 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
MSLN-207ENST00000566549 ADGRB3O60242 1522 aa25.03■■□□□ 1.6
MSLN-207ENST00000566549 PPP2R1AP30153 589 aa25.02■■□□□ 1.6
MSLN-207ENST00000566549 RNF123Q5XPI4 1314 aa25.01■■□□□ 1.59
MSLN-207ENST00000566549 ABCC3O15438 1527 aa25.01■■□□□ 1.59
MSLN-207ENST00000566549 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
MSLN-207ENST00000566549 SYNMO15061 1565 aa25.01■■□□□ 1.59
MSLN-207ENST00000566549 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.59
MSLN-207ENST00000566549 CDCA7LQ96GN5 454 aa25■■□□□ 1.59
MSLN-207ENST00000566549 TMEM132EQ6IEE7 984 aa24.99■■□□□ 1.59
MSLN-207ENST00000566549 ERVK-7P63135 1459 aa24.99■■□□□ 1.59
MSLN-207ENST00000566549 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
MSLN-207ENST00000566549 ADAMTS8Q9UP79 889 aa24.98■■□□□ 1.59
MSLN-207ENST00000566549 NRXN1Q9ULB1 1477 aa24.98■■□□□ 1.59
MSLN-207ENST00000566549 IFT172Q9UG01 1749 aa24.98■■□□□ 1.59
MSLN-207ENST00000566549 YEATS2Q9ULM3 1422 aa24.96■■□□□ 1.59
MSLN-207ENST00000566549 MYOM1P52179 1685 aa24.96■■□□□ 1.59
MSLN-207ENST00000566549 DIP2CQ9Y2E4 1556 aa24.95■■□□□ 1.59
MSLN-207ENST00000566549 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.58
MSLN-207ENST00000566549 ASXL1Q8IXJ9 1541 aa24.95■■□□□ 1.58
MSLN-207ENST00000566549 CENPJQ9HC77 1338 aaPredicted RBP24.94■■□□□ 1.58
MSLN-207ENST00000566549 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
MSLN-207ENST00000566549 WDR43Q15061 677 aaKnown RBP eCLIP24.93■■□□□ 1.58
MSLN-207ENST00000566549 PIK3C2GO75747 1445 aa24.93■■□□□ 1.58
MSLN-207ENST00000566549 RCAN3Q9UKA8 241 aa24.93■■□□□ 1.58
MSLN-207ENST00000566549 C14orf93Q9H972 538 aaKnown RBP24.92■■□□□ 1.58
MSLN-207ENST00000566549 PDE3BQ13370 1112 aa24.92■■□□□ 1.58
MSLN-207ENST00000566549 CARD14Q9BXL6 1004 aa24.91■■□□□ 1.58
MSLN-207ENST00000566549 CAMSAP1Q5T5Y3 1602 aa24.91■■□□□ 1.58
MSLN-207ENST00000566549 CCDC136Q96JN2 1154 aa24.91■■□□□ 1.58
MSLN-207ENST00000566549 RRP1P56182 461 aaKnown RBP24.9■■□□□ 1.58
MSLN-207ENST00000566549 FAM69CQ0P6D2 419 aa24.9■■□□□ 1.58
MSLN-207ENST00000566549 SLC24A1O60721 1099 aa24.89■■□□□ 1.58
MSLN-207ENST00000566549 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.57
MSLN-207ENST00000566549 RICTORQ6R327 1708 aa24.87■■□□□ 1.57
MSLN-207ENST00000566549 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
MSLN-207ENST00000566549 IDI1Q13907 227 aa24.86■■□□□ 1.57
MSLN-207ENST00000566549 PPLO60437 1756 aa24.86■■□□□ 1.57
MSLN-207ENST00000566549 INSRP06213 1382 aa24.85■■□□□ 1.57
MSLN-207ENST00000566549 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
MSLN-207ENST00000566549 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
MSLN-207ENST00000566549 NPC1L1Q9UHC9 1359 aa24.83■■□□□ 1.57
MSLN-207ENST00000566549 SBNO2Q9Y2G9 1366 aa24.83■■□□□ 1.57
MSLN-207ENST00000566549 ZMYM4Q5VZL5 1548 aa24.83■■□□□ 1.57
MSLN-207ENST00000566549 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
MSLN-207ENST00000566549 SLC12A5Q9H2X9 1139 aa24.82■■□□□ 1.56
MSLN-207ENST00000566549 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
MSLN-207ENST00000566549 EXOC6Q8TAG9 804 aa24.82■■□□□ 1.56
MSLN-207ENST00000566549 MYO3AQ8NEV4 1616 aa24.81■■□□□ 1.56
MSLN-207ENST00000566549 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.56
MSLN-207ENST00000566549 PLEKHH1Q9ULM0 1364 aa24.8■■□□□ 1.56
MSLN-207ENST00000566549 PLIN1O60240 522 aa24.8■■□□□ 1.56
MSLN-207ENST00000566549 TNNT2P45379 298 aaPredicted RBP24.78■■□□□ 1.56
MSLN-207ENST00000566549 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
MSLN-207ENST00000566549 ARHGAP31Q2M1Z3 1444 aa24.77■■□□□ 1.56
MSLN-207ENST00000566549 NSD3Q9BZ95 1437 aa24.77■■□□□ 1.56
MSLN-207ENST00000566549 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
MSLN-207ENST00000566549 PIK3C2BO00750 1634 aa24.77■■□□□ 1.56
MSLN-207ENST00000566549 STK26Q9P289 416 aa24.76■■□□□ 1.55
MSLN-207ENST00000566549 RIMBP3CA6NJZ7 1639 aa24.76■■□□□ 1.55
MSLN-207ENST00000566549 RIMBP3BA6NNM3 1639 aa24.76■■□□□ 1.55
MSLN-207ENST00000566549 RIMBP3Q9UFD9 1639 aa24.76■■□□□ 1.55
MSLN-207ENST00000566549 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
MSLN-207ENST00000566549 SLC52A1Q9NWF4 448 aa24.75■■□□□ 1.55
MSLN-207ENST00000566549 GLI2P10070 1586 aa24.74■■□□□ 1.55
MSLN-207ENST00000566549 MORC1Q86VD1 984 aa24.72■■□□□ 1.55
MSLN-207ENST00000566549 ZC3H13Q5T200 1668 aaKnown RBP24.71■■□□□ 1.55
MSLN-207ENST00000566549 APAF1O14727 1248 aa24.71■■□□□ 1.55
MSLN-207ENST00000566549 MYT1Q01538 1121 aa24.71■■□□□ 1.55
MSLN-207ENST00000566549 CABP2Q9NPB3 220 aa24.71■■□□□ 1.55
MSLN-207ENST00000566549 DIP2BQ9P265 1576 aa24.69■■□□□ 1.54
MSLN-207ENST00000566549 TSPOAP1O95153 1857 aa24.69■■□□□ 1.54
MSLN-207ENST00000566549 GOLGA2Q08379 1002 aa24.69■■□□□ 1.54
MSLN-207ENST00000566549 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
MSLN-207ENST00000566549 MLECQ14165 292 aa24.68■■□□□ 1.54
MSLN-207ENST00000566549 DUSP27Q5VZP5 1158 aa24.68■■□□□ 1.54
MSLN-207ENST00000566549 ZNF521Q96K83 1311 aa24.67■■□□□ 1.54
MSLN-207ENST00000566549 STAG3Q9UJ98 1225 aa24.66■■□□□ 1.54
MSLN-207ENST00000566549 MSH5O43196 834 aa24.65■■□□□ 1.54
MSLN-207ENST00000566549 PREX1Q8TCU6 1659 aa24.65■■□□□ 1.54
MSLN-207ENST00000566549 TULP4Q9NRJ4 1543 aa24.64■■□□□ 1.54
MSLN-207ENST00000566549 C20orf194Q5TEA3 1177 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms