RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 STAC3Q96MF2 364 aa15.8■□□□□ 0.12
LINC00562-201ENST00000566385 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
LINC00562-201ENST00000566385 MYOM2P54296 1465 aa15.79■□□□□ 0.12
LINC00562-201ENST00000566385 TESK2Q96S53 571 aa15.79■□□□□ 0.12
LINC00562-201ENST00000566385 PPLO60437 1756 aa15.79■□□□□ 0.12
LINC00562-201ENST00000566385 MYO5BQ9ULV0 1848 aa15.79■□□□□ 0.12
LINC00562-201ENST00000566385 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
LINC00562-201ENST00000566385 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
LINC00562-201ENST00000566385 SLC52A1Q9NWF4 448 aa15.77■□□□□ 0.11
LINC00562-201ENST00000566385 ERVK-7P63135 1459 aa15.77■□□□□ 0.11
LINC00562-201ENST00000566385 NRXN1Q9ULB1 1477 aa15.76■□□□□ 0.11
LINC00562-201ENST00000566385 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
LINC00562-201ENST00000566385 DISP3Q9P2K9 1392 aa15.75■□□□□ 0.11
LINC00562-201ENST00000566385 TMEM131LA2VDJ0 1609 aa15.74■□□□□ 0.11
LINC00562-201ENST00000566385 NEXMIFQ5QGS0 1516 aa15.74■□□□□ 0.11
LINC00562-201ENST00000566385 KIAA1210Q9ULL0 1709 aa15.74■□□□□ 0.11
LINC00562-201ENST00000566385 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
LINC00562-201ENST00000566385 CNGB1Q14028 1251 aaPredicted RBP15.73■□□□□ 0.11
LINC00562-201ENST00000566385 PIK3C2GO75747 1445 aa15.73■□□□□ 0.11
LINC00562-201ENST00000566385 SCAF11Q99590 1463 aaKnown RBP15.72■□□□□ 0.11
LINC00562-201ENST00000566385 TMEM132EQ6IEE7 984 aa15.72■□□□□ 0.11
LINC00562-201ENST00000566385 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
LINC00562-201ENST00000566385 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
LINC00562-201ENST00000566385 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.1
LINC00562-201ENST00000566385 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
LINC00562-201ENST00000566385 C14orf93Q9H972 538 aaKnown RBP15.7■□□□□ 0.1
LINC00562-201ENST00000566385 CCDC184Q52MB2 194 aa15.69■□□□□ 0.1
LINC00562-201ENST00000566385 CCER2I3L3R5 266 aa15.69■□□□□ 0.1
LINC00562-201ENST00000566385 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
LINC00562-201ENST00000566385 CENPBP07199 599 aaPredicted RBP15.68■□□□□ 0.1
LINC00562-201ENST00000566385 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
LINC00562-201ENST00000566385 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
LINC00562-201ENST00000566385 TMF1P82094 1093 aa15.67■□□□□ 0.1
LINC00562-201ENST00000566385 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
LINC00562-201ENST00000566385 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
LINC00562-201ENST00000566385 A2ML1A8K2U0 1454 aa15.65■□□□□ 0.1
LINC00562-201ENST00000566385 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
LINC00562-201ENST00000566385 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
LINC00562-201ENST00000566385 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
LINC00562-201ENST00000566385 EIF3AQ14152 1382 aaKnown RBP15.63■□□□□ 0.09
LINC00562-201ENST00000566385 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
LINC00562-201ENST00000566385 PANK3Q9H999 370 aa15.6■□□□□ 0.09
LINC00562-201ENST00000566385 TNRQ92752 1358 aa15.6■□□□□ 0.09
LINC00562-201ENST00000566385 ASXL1Q8IXJ9 1541 aa15.6■□□□□ 0.09
LINC00562-201ENST00000566385 STK26Q9P289 416 aa15.59■□□□□ 0.09
LINC00562-201ENST00000566385 CENPJQ9HC77 1338 aaPredicted RBP15.59■□□□□ 0.09
LINC00562-201ENST00000566385 MYO3AQ8NEV4 1616 aa15.58■□□□□ 0.08
LINC00562-201ENST00000566385 C3P01024 1663 aa15.58■□□□□ 0.08
LINC00562-201ENST00000566385 RIMS2Q9UQ26 1411 aa15.58■□□□□ 0.08
LINC00562-201ENST00000566385 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
LINC00562-201ENST00000566385 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC00562-201ENST00000566385 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
LINC00562-201ENST00000566385 ALKQ9UM73 1620 aa15.56■□□□□ 0.08
LINC00562-201ENST00000566385 QRICH2Q9H0J4 1663 aa15.56■□□□□ 0.08
LINC00562-201ENST00000566385 ARHGEF28Q8N1W1 1705 aaKnown RBP15.55■□□□□ 0.08
LINC00562-201ENST00000566385 MYOM1P52179 1685 aa15.55■□□□□ 0.08
LINC00562-201ENST00000566385 UBR1Q8IWV7 1749 aa15.54■□□□□ 0.08
LINC00562-201ENST00000566385 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
LINC00562-201ENST00000566385 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
LINC00562-201ENST00000566385 PTPRMP28827 1452 aa15.53■□□□□ 0.08
LINC00562-201ENST00000566385 SBNO2Q9Y2G9 1366 aa15.53■□□□□ 0.08
LINC00562-201ENST00000566385 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
LINC00562-201ENST00000566385 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
LINC00562-201ENST00000566385 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
LINC00562-201ENST00000566385 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
LINC00562-201ENST00000566385 NRXN3Q9Y4C0 1643 aa15.51■□□□□ 0.07
LINC00562-201ENST00000566385 TMEM2Q9UHN6 1383 aa15.51■□□□□ 0.07
LINC00562-201ENST00000566385 SETD1AO15047 1707 aaKnown RBP15.5■□□□□ 0.07
LINC00562-201ENST00000566385 LTKP29376 864 aa15.5■□□□□ 0.07
LINC00562-201ENST00000566385 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
LINC00562-201ENST00000566385 METP08581 1390 aa15.48■□□□□ 0.07
LINC00562-201ENST00000566385 PARD3Q8TEW0 1356 aa15.48■□□□□ 0.07
LINC00562-201ENST00000566385 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
LINC00562-201ENST00000566385 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.48■□□□□ 0.07
LINC00562-201ENST00000566385 TULP4Q9NRJ4 1543 aa15.48■□□□□ 0.07
LINC00562-201ENST00000566385 NLRP1Q9C000 1473 aa15.47■□□□□ 0.07
LINC00562-201ENST00000566385 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
LINC00562-201ENST00000566385 RALBP1Q15311 655 aa15.47■□□□□ 0.07
LINC00562-201ENST00000566385 CARD14Q9BXL6 1004 aa15.47■□□□□ 0.07
LINC00562-201ENST00000566385 SLC12A5Q9H2X9 1139 aa15.47■□□□□ 0.07
LINC00562-201ENST00000566385 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
LINC00562-201ENST00000566385 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
LINC00562-201ENST00000566385 HNRNPUQ00839 825 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00562-201ENST00000566385 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.07
LINC00562-201ENST00000566385 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
LINC00562-201ENST00000566385 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
LINC00562-201ENST00000566385 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
LINC00562-201ENST00000566385 BCANQ96GW7 911 aa15.46■□□□□ 0.07
LINC00562-201ENST00000566385 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
LINC00562-201ENST00000566385 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
LINC00562-201ENST00000566385 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
LINC00562-201ENST00000566385 POGKQ9P215 609 aa15.45■□□□□ 0.06
LINC00562-201ENST00000566385 PLEKHH1Q9ULM0 1364 aa15.44■□□□□ 0.06
LINC00562-201ENST00000566385 TXNDC2Q86VQ3 553 aa15.44■□□□□ 0.06
LINC00562-201ENST00000566385 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
LINC00562-201ENST00000566385 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
LINC00562-201ENST00000566385 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
LINC00562-201ENST00000566385 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
LINC00562-201ENST00000566385 ADAMTSL3P82987 1691 aa15.42■□□□□ 0.06
LINC00562-201ENST00000566385 LRPPRCP42704 1394 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms