RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
CNOT1-209ENST00000566240 ARID3CA6NKF2 412 aa9.47□□□□□ -0.89
CNOT1-209ENST00000566240 MCM6Q14566 821 aa9.47□□□□□ -0.89
CNOT1-209ENST00000566240 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
CNOT1-209ENST00000566240 ARID3AQ99856 593 aa9.47□□□□□ -0.89
CNOT1-209ENST00000566240 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
CNOT1-209ENST00000566240 HCSTQ9UBK5 93 aa9.46□□□□□ -0.9
CNOT1-209ENST00000566240 TK2O00142 265 aa9.45□□□□□ -0.9
CNOT1-209ENST00000566240 HRO43593 1189 aa9.45□□□□□ -0.9
CNOT1-209ENST00000566240 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
CNOT1-209ENST00000566240 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.45□□□□□ -0.9
CNOT1-209ENST00000566240 TRAK2O60296 914 aa9.44□□□□□ -0.9
CNOT1-209ENST00000566240 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
CNOT1-209ENST00000566240 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
CNOT1-209ENST00000566240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
CNOT1-209ENST00000566240 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
CNOT1-209ENST00000566240 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
CNOT1-209ENST00000566240 COL9A1P20849 921 aa9.42□□□□□ -0.9
CNOT1-209ENST00000566240 RCCD1A6NED2 376 aa9.41□□□□□ -0.9
CNOT1-209ENST00000566240 KCNK17Q96T54 332 aa9.41□□□□□ -0.9
CNOT1-209ENST00000566240 EYA1Q99502 592 aa9.41□□□□□ -0.9
CNOT1-209ENST00000566240 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
CNOT1-209ENST00000566240 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
CNOT1-209ENST00000566240 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
CNOT1-209ENST00000566240 RAD21O60216 631 aa9.38□□□□□ -0.91
CNOT1-209ENST00000566240 RFC5P40937 340 aa9.38□□□□□ -0.91
CNOT1-209ENST00000566240 SPIRE2Q8WWL2 714 aa9.38□□□□□ -0.91
CNOT1-209ENST00000566240 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
CNOT1-209ENST00000566240 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 CD46P15529 392 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 PTPREP23469 700 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 NUDT18Q6ZVK8 323 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 PROSER2Q86WR7 435 aaPredicted RBP9.37□□□□□ -0.91
CNOT1-209ENST00000566240 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
CNOT1-209ENST00000566240 POM121Q96HA1 1249 aa9.36□□□□□ -0.91
CNOT1-209ENST00000566240 C3orf80F5H4A9 247 aa9.35□□□□□ -0.91
CNOT1-209ENST00000566240 DNAJB2P25686 324 aa9.35□□□□□ -0.91
CNOT1-209ENST00000566240 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
CNOT1-209ENST00000566240 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
CNOT1-209ENST00000566240 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
CNOT1-209ENST00000566240 FNBP4Q8N3X1 1017 aaPredicted RBP9.35□□□□□ -0.91
CNOT1-209ENST00000566240 TATDN2Q93075 761 aa9.35□□□□□ -0.91
CNOT1-209ENST00000566240 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 TRIM6-TRIM34B2RNG4 842 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 TUSC1Q2TAM9 212 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 PACS2Q86VP3 889 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 NUTM1Q86Y26 1132 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 KCNH8Q96L42 1107 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 SNRKQ9NRH2 765 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
CNOT1-209ENST00000566240 VPS9D1Q9Y2B5 631 aa9.34□□□□□ -0.91
CNOT1-209ENST00000566240 SPTLC1O15269 473 aa9.33□□□□□ -0.92
CNOT1-209ENST00000566240 TMEM134Q9H6X4 195 aa9.33□□□□□ -0.92
CNOT1-209ENST00000566240 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
CNOT1-209ENST00000566240 COG6Q9Y2V7 657 aa9.32□□□□□ -0.92
CNOT1-209ENST00000566240 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-209ENST00000566240 MOXD2PA6NHM9 499 aa9.3□□□□□ -0.92
CNOT1-209ENST00000566240 SMAPO00193 183 aa9.29□□□□□ -0.92
CNOT1-209ENST00000566240 GJA5P36382 358 aa9.29□□□□□ -0.92
CNOT1-209ENST00000566240 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
CNOT1-209ENST00000566240 NDUFV2P19404 249 aa9.28□□□□□ -0.92
CNOT1-209ENST00000566240 PROX2Q3B8N5 592 aa9.28□□□□□ -0.92
CNOT1-209ENST00000566240 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
CNOT1-209ENST00000566240 LILRB3O75022 631 aa9.27□□□□□ -0.93
CNOT1-209ENST00000566240 PTPN5P54829 565 aa9.27□□□□□ -0.93
CNOT1-209ENST00000566240 QPCTQ16769 361 aa9.27□□□□□ -0.93
CNOT1-209ENST00000566240 RDH13Q8NBN7 331 aa9.27□□□□□ -0.93
CNOT1-209ENST00000566240 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
CNOT1-209ENST00000566240 MTMR14Q8NCE2 650 aa9.26□□□□□ -0.93
CNOT1-209ENST00000566240 PODXL2Q9NZ53 605 aa9.26□□□□□ -0.93
CNOT1-209ENST00000566240 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
CNOT1-209ENST00000566240 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-209ENST00000566240 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-209ENST00000566240 KDM4AO75164 1064 aa9.25□□□□□ -0.93
CNOT1-209ENST00000566240 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
CNOT1-209ENST00000566240 TRIM26Q12899 539 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-209ENST00000566240 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-209ENST00000566240 RSPH4AQ5TD94 716 aa9.24□□□□□ -0.93
CNOT1-209ENST00000566240 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-209ENST00000566240 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
CNOT1-209ENST00000566240 NUTM2BA6NNL0 878 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-209ENST00000566240 NUTM2EB1AL46 878 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-209ENST00000566240 AP1G2O75843 785 aa9.23□□□□□ -0.93
CNOT1-209ENST00000566240 GCGRP47871 477 aa9.23□□□□□ -0.93
CNOT1-209ENST00000566240 NUTM2DQ5VT03 806 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-209ENST00000566240 THSD4Q6ZMP0 1018 aa9.23□□□□□ -0.93
CNOT1-209ENST00000566240 NUTM2AQ8IVF1 878 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-209ENST00000566240 GDPD2Q9HCC8 539 aa9.23□□□□□ -0.93
CNOT1-209ENST00000566240 SOCS7O14512 581 aa9.22□□□□□ -0.93
CNOT1-209ENST00000566240 USP46P62068 366 aa9.22□□□□□ -0.93
CNOT1-209ENST00000566240 PRPF38BQ5VTL8 546 aaKnown RBP9.22□□□□□ -0.93
CNOT1-209ENST00000566240 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
CNOT1-209ENST00000566240 PDIA4P13667 645 aaKnown RBP9.21□□□□□ -0.94
CNOT1-209ENST00000566240 WWC1Q8IX03 1113 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms