RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TRAPPC8Q9Y2L5 1435 aa4.45□□□□□ -1.7
CHD9-216ENST00000565803 CCDC136Q96JN2 1154 aa4.45□□□□□ -1.7
CHD9-216ENST00000565803 STRCP1A6NGW2 1772 aa4.45□□□□□ -1.7
CHD9-216ENST00000565803 ATP10AO60312 1499 aa4.45□□□□□ -1.7
CHD9-216ENST00000565803 KDM5AP29375 1690 aaKnown RBP4.45□□□□□ -1.7
CHD9-216ENST00000565803 LMOD2Q6P5Q4 547 aa4.45□□□□□ -1.7
CHD9-216ENST00000565803 PLCD3Q8N3E9 789 aa4.45□□□□□ -1.7
CHD9-216ENST00000565803 PRKAR2AP13861 404 aaKnown RBP4.44□□□□□ -1.7
CHD9-216ENST00000565803 IRX6P78412 446 aaPredicted RBP4.44□□□□□ -1.7
CHD9-216ENST00000565803 PUS7Q96PZ0 661 aaKnown RBP4.44□□□□□ -1.7
CHD9-216ENST00000565803 DENND4BO75064 1496 aaPredicted RBP4.44□□□□□ -1.7
CHD9-216ENST00000565803 LRRC9Q6ZRR7 1453 aa4.44□□□□□ -1.7
CHD9-216ENST00000565803 RGS17Q9UGC6 210 aaPredicted RBP4.44□□□□□ -1.7
CHD9-216ENST00000565803 LRRC7Q96NW7 1537 aa4.43□□□□□ -1.7
CHD9-216ENST00000565803 PLXNC1O60486 1568 aa4.43□□□□□ -1.7
CHD9-216ENST00000565803 CAMSAP2Q08AD1 1489 aa4.43□□□□□ -1.7
CHD9-216ENST00000565803 LAMC1P11047 1609 aa4.43□□□□□ -1.7
CHD9-216ENST00000565803 ZEB1P37275 1124 aaPredicted RBP4.43□□□□□ -1.7
CHD9-216ENST00000565803 VGFO15240 615 aaPredicted RBP4.43□□□□□ -1.7
CHD9-216ENST00000565803 FAM212AQ96EL1 285 aa4.43□□□□□ -1.7
CHD9-216ENST00000565803 ATP10BO94823 1461 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 SAMD9Q5K651 1589 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 E9PSI1 815 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 PSMD1Q99460 953 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 DNMT1P26358 1616 aaKnown RBP4.42□□□□□ -1.7
CHD9-216ENST00000565803 GOLGA3Q08378 1498 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 IL27Q8NEV9 243 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 FBXW7Q969H0 707 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 NWD1Q149M9 1564 aa4.42□□□□□ -1.7
CHD9-216ENST00000565803 GTPBP6O43824 516 aaPredicted RBP4.41□□□□□ -1.7
CHD9-216ENST00000565803 FBXO22Q8NEZ5 403 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 PKNOX2Q96KN3 472 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 BCL11BQ9C0K0 894 aaPredicted RBP4.41□□□□□ -1.7
CHD9-216ENST00000565803 ABCC3O15438 1527 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 KDM5DQ9BY66 1539 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 POTEHQ6S545 545 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 GZF1Q9H116 711 aaPredicted RBP4.41□□□□□ -1.7
CHD9-216ENST00000565803 C1orf115Q9H7X2 142 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 CWC22Q9HCG8 908 aaKnown RBP4.41□□□□□ -1.7
CHD9-216ENST00000565803 SHANK2Q9UPX8 1470 aa4.41□□□□□ -1.7
CHD9-216ENST00000565803 ABCA6Q8N139 1617 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 ZNF326Q5BKZ1 582 aaKnown RBP4.4□□□□□ -1.7
CHD9-216ENST00000565803 CHADLQ6NUI6 762 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 FAM135BQ49AJ0 1406 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 FGD6Q6ZV73 1430 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 MLH3Q9UHC1 1453 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 UNC13BO14795 1591 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 IQGAP1P46940 1657 aa4.4□□□□□ -1.7
CHD9-216ENST00000565803 SLC24A3Q9HC58 644 aa4.4□□□□□ -1.71
CHD9-216ENST00000565803 PCDH10Q9P2E7 1040 aa4.4□□□□□ -1.71
CHD9-216ENST00000565803 CIZ1Q9ULV3 898 aaPredicted RBP4.4□□□□□ -1.71
CHD9-216ENST00000565803 AHDC1Q5TGY3 1603 aaPredicted RBP4.4□□□□□ -1.71
CHD9-216ENST00000565803 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
CHD9-216ENST00000565803 MFAP1P55081 439 aaKnown RBP4.39□□□□□ -1.71
CHD9-216ENST00000565803 ZNF592Q92610 1267 aa4.39□□□□□ -1.71
CHD9-216ENST00000565803 DIP2AQ14689 1571 aa4.39□□□□□ -1.71
CHD9-216ENST00000565803 A2ML1A8K2U0 1454 aa4.39□□□□□ -1.71
CHD9-216ENST00000565803 ITSN2Q9NZM3 1697 aa4.39□□□□□ -1.71
CHD9-216ENST00000565803 CLEC11AQ9Y240 323 aa4.39□□□□□ -1.71
CHD9-216ENST00000565803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD9-216ENST00000565803 ZNF467Q7Z7K2 595 aaPredicted RBP4.38□□□□□ -1.71
CHD9-216ENST00000565803 CCDC82Q8N4S0 544 aa4.38□□□□□ -1.71
CHD9-216ENST00000565803 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.38□□□□□ -1.71
CHD9-216ENST00000565803 ATP7AQ04656 1500 aa4.38□□□□□ -1.71
CHD9-216ENST00000565803 MYO5CQ9NQX4 1742 aa4.38□□□□□ -1.71
CHD9-216ENST00000565803 NAP1L5Q96NT1 182 aaPredicted RBP4.37□□□□□ -1.71
CHD9-216ENST00000565803 IGF1RP08069 1367 aa4.37□□□□□ -1.71
CHD9-216ENST00000565803 ARHGAP23Q9P227 1491 aa4.37□□□□□ -1.71
CHD9-216ENST00000565803 SLC34A2O95436 690 aa4.36□□□□□ -1.71
CHD9-216ENST00000565803 ASTLQ6HA08 431 aaPredicted RBP4.36□□□□□ -1.71
CHD9-216ENST00000565803 PPP1R1BQ9UD71 204 aaPredicted RBP4.36□□□□□ -1.71
CHD9-216ENST00000565803 ARIH1Q9Y4X5 557 aaPredicted RBP4.36□□□□□ -1.71
CHD9-216ENST00000565803 CROCC2H7BZ55 1655 aa4.36□□□□□ -1.71
CHD9-216ENST00000565803 IFNL1Q8IU54 200 aa4.36□□□□□ -1.71
CHD9-216ENST00000565803 FAM177A1Q8N128 213 aaPredicted RBP4.36□□□□□ -1.71
CHD9-216ENST00000565803 TIE1P35590 1138 aa4.36□□□□□ -1.71
CHD9-216ENST00000565803 ATP1B4Q9UN42 357 aaPredicted RBP4.36□□□□□ -1.71
CHD9-216ENST00000565803 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.35□□□□□ -1.71
CHD9-216ENST00000565803 PDAP1Q13442 181 aaKnown RBP4.35□□□□□ -1.71
CHD9-216ENST00000565803 UPF1Q92900 1129 aaKnown RBP eCLIP4.35□□□□□ -1.71
CHD9-216ENST00000565803 ZFP91Q96JP5 570 aaPredicted RBP4.35□□□□□ -1.71
CHD9-216ENST00000565803 BCCIPQ9P287 314 aaKnown RBP eCLIP4.35□□□□□ -1.71
CHD9-216ENST00000565803 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.35□□□□□ -1.71
CHD9-216ENST00000565803 EVX2Q03828 476 aa4.35□□□□□ -1.71
CHD9-216ENST00000565803 KIDINS220Q9ULH0 1771 aa4.35□□□□□ -1.71
CHD9-216ENST00000565803 HSPA1LP34931 641 aa4.35□□□□□ -1.71
CHD9-216ENST00000565803 TMEM121BQ9BXQ6 578 aaPredicted RBP4.35□□□□□ -1.71
CHD9-216ENST00000565803 MFRPQ9BY79 579 aa4.35□□□□□ -1.71
CHD9-216ENST00000565803 GPBP1L1Q9HC44 474 aaPredicted RBP4.35□□□□□ -1.71
CHD9-216ENST00000565803 BCL9LQ86UU0 1499 aa4.34□□□□□ -1.71
CHD9-216ENST00000565803 ZNF518AQ6AHZ1 1483 aa4.34□□□□□ -1.71
CHD9-216ENST00000565803 MS4A4AQ96JQ5 239 aa4.34□□□□□ -1.71
CHD9-216ENST00000565803 MAP3K13O43283 966 aa4.34□□□□□ -1.72
CHD9-216ENST00000565803 CLSTN1O94985 981 aa4.34□□□□□ -1.72
CHD9-216ENST00000565803 BRPF3Q9ULD4 1205 aa4.34□□□□□ -1.72
CHD9-216ENST00000565803 INO80Q9ULG1 1556 aaPredicted RBP4.34□□□□□ -1.72
CHD9-216ENST00000565803 ADGBQ8N7X0 1667 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 ROBO1Q9Y6N7 1651 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 MAP3K1Q13233 1512 aa4.33□□□□□ -1.72
CHD9-216ENST00000565803 SOX12O15370 315 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms