RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 PPLO60437 1756 aa13.2□□□□□ -0.3
CNEP1R1-206ENST00000565556 TNRQ92752 1358 aa13.2□□□□□ -0.3
CNEP1R1-206ENST00000565556 EIF4G2P78344 907 aaKnown RBP eCLIP13.19□□□□□ -0.3
CNEP1R1-206ENST00000565556 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
CNEP1R1-206ENST00000565556 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
CNEP1R1-206ENST00000565556 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
CNEP1R1-206ENST00000565556 MYO5BQ9ULV0 1848 aa13.18□□□□□ -0.3
CNEP1R1-206ENST00000565556 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
CNEP1R1-206ENST00000565556 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
CNEP1R1-206ENST00000565556 ROCK2O75116 1388 aaKnown RBP13.17□□□□□ -0.3
CNEP1R1-206ENST00000565556 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
CNEP1R1-206ENST00000565556 LAMC1P11047 1609 aa13.16□□□□□ -0.3
CNEP1R1-206ENST00000565556 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
CNEP1R1-206ENST00000565556 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
CNEP1R1-206ENST00000565556 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
CNEP1R1-206ENST00000565556 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
CNEP1R1-206ENST00000565556 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
CNEP1R1-206ENST00000565556 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
CNEP1R1-206ENST00000565556 GPRASP1Q5JY77 1395 aa13.15□□□□□ -0.3
CNEP1R1-206ENST00000565556 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
CNEP1R1-206ENST00000565556 A2ML1A8K2U0 1454 aa13.14□□□□□ -0.31
CNEP1R1-206ENST00000565556 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
CNEP1R1-206ENST00000565556 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
CNEP1R1-206ENST00000565556 USP47Q96K76 1375 aa13.13□□□□□ -0.31
CNEP1R1-206ENST00000565556 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
CNEP1R1-206ENST00000565556 UBR1Q8IWV7 1749 aa13.12□□□□□ -0.31
CNEP1R1-206ENST00000565556 PIK3C2GO75747 1445 aa13.11□□□□□ -0.31
CNEP1R1-206ENST00000565556 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
CNEP1R1-206ENST00000565556 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
CNEP1R1-206ENST00000565556 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
CNEP1R1-206ENST00000565556 RIMS2Q9UQ26 1411 aa13.1□□□□□ -0.31
CNEP1R1-206ENST00000565556 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
CNEP1R1-206ENST00000565556 HIRIP3Q9BW71 556 aaPredicted RBP13.1□□□□□ -0.31
CNEP1R1-206ENST00000565556 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-206ENST00000565556 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-206ENST00000565556 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
CNEP1R1-206ENST00000565556 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
CNEP1R1-206ENST00000565556 IQGAP1P46940 1657 aa13.08□□□□□ -0.32
CNEP1R1-206ENST00000565556 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
CNEP1R1-206ENST00000565556 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
CNEP1R1-206ENST00000565556 POLR1AO95602 1720 aaPredicted RBP13.06□□□□□ -0.32
CNEP1R1-206ENST00000565556 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
CNEP1R1-206ENST00000565556 THEMISQ8N1K5 641 aaPredicted RBP13.06□□□□□ -0.32
CNEP1R1-206ENST00000565556 EIF3AQ14152 1382 aaKnown RBP13.06□□□□□ -0.32
CNEP1R1-206ENST00000565556 PTPRMP28827 1452 aa13.05□□□□□ -0.32
CNEP1R1-206ENST00000565556 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
CNEP1R1-206ENST00000565556 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
CNEP1R1-206ENST00000565556 SLIT1O75093 1534 aa13.04□□□□□ -0.32
CNEP1R1-206ENST00000565556 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
CNEP1R1-206ENST00000565556 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
CNEP1R1-206ENST00000565556 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
CNEP1R1-206ENST00000565556 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
CNEP1R1-206ENST00000565556 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
CNEP1R1-206ENST00000565556 ALKQ9UM73 1620 aa13.02□□□□□ -0.33
CNEP1R1-206ENST00000565556 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
CNEP1R1-206ENST00000565556 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
CNEP1R1-206ENST00000565556 ADRA2BP18089 450 aa13□□□□□ -0.33
CNEP1R1-206ENST00000565556 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
CNEP1R1-206ENST00000565556 PLEKHG1Q9ULL1 1385 aa12.99□□□□□ -0.33
CNEP1R1-206ENST00000565556 DDX10Q13206 875 aaKnown RBP12.99□□□□□ -0.33
CNEP1R1-206ENST00000565556 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
CNEP1R1-206ENST00000565556 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
CNEP1R1-206ENST00000565556 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
CNEP1R1-206ENST00000565556 TESK2Q96S53 571 aa12.99□□□□□ -0.33
CNEP1R1-206ENST00000565556 TMF1P82094 1093 aa12.98□□□□□ -0.33
CNEP1R1-206ENST00000565556 NRXN3Q9Y4C0 1643 aa12.98□□□□□ -0.33
CNEP1R1-206ENST00000565556 SETD1AO15047 1707 aaKnown RBP12.98□□□□□ -0.33
CNEP1R1-206ENST00000565556 LTKP29376 864 aa12.97□□□□□ -0.33
CNEP1R1-206ENST00000565556 BCANQ96GW7 911 aa12.97□□□□□ -0.33
CNEP1R1-206ENST00000565556 ASXL1Q8IXJ9 1541 aa12.96□□□□□ -0.33
CNEP1R1-206ENST00000565556 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
CNEP1R1-206ENST00000565556 TRAK1Q9UPV9 953 aa12.96□□□□□ -0.33
CNEP1R1-206ENST00000565556 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.33
CNEP1R1-206ENST00000565556 SBNO2Q9Y2G9 1366 aa12.96□□□□□ -0.33
CNEP1R1-206ENST00000565556 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.33
CNEP1R1-206ENST00000565556 ARHGEF28Q8N1W1 1705 aaKnown RBP12.95□□□□□ -0.34
CNEP1R1-206ENST00000565556 ANKLE2Q86XL3 938 aa12.95□□□□□ -0.34
CNEP1R1-206ENST00000565556 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
CNEP1R1-206ENST00000565556 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
CNEP1R1-206ENST00000565556 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
CNEP1R1-206ENST00000565556 ADAMTS13Q76LX8 1427 aa12.94□□□□□ -0.34
CNEP1R1-206ENST00000565556 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 QRICH2Q9H0J4 1663 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 STK26Q9P289 416 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 MED14O60244 1454 aa12.93□□□□□ -0.34
CNEP1R1-206ENST00000565556 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
CNEP1R1-206ENST00000565556 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
CNEP1R1-206ENST00000565556 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
CNEP1R1-206ENST00000565556 POLR3GLQ9BT43 218 aa12.91□□□□□ -0.34
CNEP1R1-206ENST00000565556 METP08581 1390 aa12.91□□□□□ -0.34
CNEP1R1-206ENST00000565556 POGKQ9P215 609 aa12.9□□□□□ -0.34
CNEP1R1-206ENST00000565556 TECPR2O15040 1411 aa12.9□□□□□ -0.35
CNEP1R1-206ENST00000565556 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
CNEP1R1-206ENST00000565556 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
CNEP1R1-206ENST00000565556 PRAM1Q96QH2 718 aa12.88□□□□□ -0.35
CNEP1R1-206ENST00000565556 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
CNEP1R1-206ENST00000565556 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms