RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 EMID1Q96A84 441 aaPredicted RBP11.33□□□□□ -0.6
CHD9-215ENST00000565442 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
CHD9-215ENST00000565442 TLL1O43897 1013 aa11.32□□□□□ -0.6
CHD9-215ENST00000565442 PAXIP1Q6ZW49 1069 aaPredicted RBP11.32□□□□□ -0.6
CHD9-215ENST00000565442 PKDCCQ504Y2 493 aa11.31□□□□□ -0.6
CHD9-215ENST00000565442 DNAJB2P25686 324 aa11.3□□□□□ -0.6
CHD9-215ENST00000565442 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
CHD9-215ENST00000565442 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
CHD9-215ENST00000565442 PRR20EP86478 221 aa11.28□□□□□ -0.6
CHD9-215ENST00000565442 PRR20CP86479 221 aa11.28□□□□□ -0.6
CHD9-215ENST00000565442 PRR20DP86480 221 aa11.28□□□□□ -0.6
CHD9-215ENST00000565442 PRR20BP86481 221 aa11.28□□□□□ -0.6
CHD9-215ENST00000565442 PRR20AP86496 221 aa11.28□□□□□ -0.6
CHD9-215ENST00000565442 ZNF598Q86UK7 904 aaKnown RBP11.28□□□□□ -0.6
CHD9-215ENST00000565442 DGAT1O75907 488 aa11.27□□□□□ -0.61
CHD9-215ENST00000565442 MYT1Q01538 1121 aa11.27□□□□□ -0.61
CHD9-215ENST00000565442 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
CHD9-215ENST00000565442 S1PR4O95977 384 aa11.26□□□□□ -0.61
CHD9-215ENST00000565442 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
CHD9-215ENST00000565442 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
CHD9-215ENST00000565442 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
CHD9-215ENST00000565442 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
CHD9-215ENST00000565442 MLLT3P42568 568 aaPredicted RBP11.25□□□□□ -0.61
CHD9-215ENST00000565442 PTGDRQ13258 359 aa11.25□□□□□ -0.61
CHD9-215ENST00000565442 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
CHD9-215ENST00000565442 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
CHD9-215ENST00000565442 CFHP08603 1231 aa11.23□□□□□ -0.61
CHD9-215ENST00000565442 ZNF697Q5TEC3 545 aa11.23□□□□□ -0.61
CHD9-215ENST00000565442 ADH1BP00325 375 aa11.21□□□□□ -0.61
CHD9-215ENST00000565442 RCCD1A6NED2 376 aa11.2□□□□□ -0.62
CHD9-215ENST00000565442 FAM187AA6NFU0 413 aa11.2□□□□□ -0.62
CHD9-215ENST00000565442 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
CHD9-215ENST00000565442 POTECB2RU33 542 aa11.19□□□□□ -0.62
CHD9-215ENST00000565442 TNFRSF10AO00220 468 aa11.19□□□□□ -0.62
CHD9-215ENST00000565442 GDF9O60383 454 aa11.19□□□□□ -0.62
CHD9-215ENST00000565442 NR1I2O75469 434 aa11.18□□□□□ -0.62
CHD9-215ENST00000565442 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
CHD9-215ENST00000565442 SLC10A3P09131 477 aa11.16□□□□□ -0.62
CHD9-215ENST00000565442 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
CHD9-215ENST00000565442 PLA2G2CQ5R387 149 aa11.15□□□□□ -0.62
CHD9-215ENST00000565442 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
CHD9-215ENST00000565442 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
CHD9-215ENST00000565442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
CHD9-215ENST00000565442 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
CHD9-215ENST00000565442 SCUBE3Q8IX30 993 aa11.11□□□□□ -0.63
CHD9-215ENST00000565442 AAASQ9NRG9 546 aa11.11□□□□□ -0.63
CHD9-215ENST00000565442 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
CHD9-215ENST00000565442 FCHSD2O94868 740 aa11.08□□□□□ -0.64
CHD9-215ENST00000565442 SPSB2Q99619 263 aa11.08□□□□□ -0.64
CHD9-215ENST00000565442 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
CHD9-215ENST00000565442 FOXC1Q12948 553 aa11.07□□□□□ -0.64
CHD9-215ENST00000565442 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
CHD9-215ENST00000565442 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
CHD9-215ENST00000565442 OATP04181 439 aa11.06□□□□□ -0.64
CHD9-215ENST00000565442 PLCB2Q00722 1185 aa11.06□□□□□ -0.64
CHD9-215ENST00000565442 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
CHD9-215ENST00000565442 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
CHD9-215ENST00000565442 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
CHD9-215ENST00000565442 CRIPAKQ8N1N5 446 aa11.03□□□□□ -0.64
CHD9-215ENST00000565442 RPIAP49247 311 aa11.02□□□□□ -0.65
CHD9-215ENST00000565442 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.65
CHD9-215ENST00000565442 METTL3Q86U44 580 aaKnown RBP11.01□□□□□ -0.65
CHD9-215ENST00000565442 TOR4AQ9NXH8 423 aa11□□□□□ -0.65
CHD9-215ENST00000565442 FCF1Q9Y324 198 aaKnown RBP11□□□□□ -0.65
CHD9-215ENST00000565442 AVPP01185 164 aa10.99□□□□□ -0.65
CHD9-215ENST00000565442 DACH1Q9UI36 760 aa10.98□□□□□ -0.65
CHD9-215ENST00000565442 CD2BP2O95400 341 aaKnown RBP10.97□□□□□ -0.65
CHD9-215ENST00000565442 HIC1Q14526 733 aa10.97□□□□□ -0.65
CHD9-215ENST00000565442 MORN1Q5T089 497 aa10.97□□□□□ -0.65
CHD9-215ENST00000565442 SEMA3EO15041 775 aa10.96□□□□□ -0.65
CHD9-215ENST00000565442 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
CHD9-215ENST00000565442 CYP4X1Q8N118 509 aa10.96□□□□□ -0.65
CHD9-215ENST00000565442 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
CHD9-215ENST00000565442 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
CHD9-215ENST00000565442 AXIN1O15169 862 aa10.95□□□□□ -0.66
CHD9-215ENST00000565442 FUT2Q10981 343 aa10.95□□□□□ -0.66
CHD9-215ENST00000565442 CTC1Q2NKJ3 1217 aa10.95□□□□□ -0.66
CHD9-215ENST00000565442 GMPR2Q9P2T1 348 aaKnown RBP10.95□□□□□ -0.66
CHD9-215ENST00000565442 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
CHD9-215ENST00000565442 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
CHD9-215ENST00000565442 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
CHD9-215ENST00000565442 ATP6V1AP38606 617 aa10.93□□□□□ -0.66
CHD9-215ENST00000565442 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
CHD9-215ENST00000565442 C11orf95C9JLR9 678 aaPredicted RBP10.92□□□□□ -0.66
CHD9-215ENST00000565442 WFS1O76024 890 aa10.92□□□□□ -0.66
CHD9-215ENST00000565442 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
CHD9-215ENST00000565442 SMCPP49901 116 aaPredicted RBP10.91□□□□□ -0.66
CHD9-215ENST00000565442 PRDM9Q9NQV7 894 aa10.91□□□□□ -0.66
CHD9-215ENST00000565442 SLC27A5Q9Y2P5 690 aa10.91□□□□□ -0.66
CHD9-215ENST00000565442 FECHP22830 423 aa10.89□□□□□ -0.67
CHD9-215ENST00000565442 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
CHD9-215ENST00000565442 TTC24A2A3L6 582 aaPredicted RBP10.88□□□□□ -0.67
CHD9-215ENST00000565442 GNPATO15228 680 aa10.88□□□□□ -0.67
CHD9-215ENST00000565442 ZBTB24O43167 697 aaPredicted RBP10.88□□□□□ -0.67
CHD9-215ENST00000565442 GCGRP47871 477 aa10.88□□□□□ -0.67
CHD9-215ENST00000565442 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
CHD9-215ENST00000565442 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
CHD9-215ENST00000565442 NFX1Q12986 1120 aaKnown RBP10.86□□□□□ -0.67
CHD9-215ENST00000565442 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
CHD9-215ENST00000565442 SULF1Q8IWU6 871 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms