RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
CHD9-214ENST00000565119 PRR20EP86478 221 aa13.01□□□□□ -0.33
CHD9-214ENST00000565119 PRR20CP86479 221 aa13.01□□□□□ -0.33
CHD9-214ENST00000565119 PRR20DP86480 221 aa13.01□□□□□ -0.33
CHD9-214ENST00000565119 PRR20BP86481 221 aa13.01□□□□□ -0.33
CHD9-214ENST00000565119 PRR20AP86496 221 aa13.01□□□□□ -0.33
CHD9-214ENST00000565119 ZNF598Q86UK7 904 aaKnown RBP13.01□□□□□ -0.33
CHD9-214ENST00000565119 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
CHD9-214ENST00000565119 LIAT1Q6ZQX7 453 aa12.99□□□□□ -0.33
CHD9-214ENST00000565119 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
CHD9-214ENST00000565119 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
CHD9-214ENST00000565119 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
CHD9-214ENST00000565119 S1PR4O95977 384 aa12.96□□□□□ -0.33
CHD9-214ENST00000565119 ZNF697Q5TEC3 545 aa12.95□□□□□ -0.34
CHD9-214ENST00000565119 FAM187AA6NFU0 413 aa12.94□□□□□ -0.34
CHD9-214ENST00000565119 TNFRSF10AO00220 468 aa12.94□□□□□ -0.34
CHD9-214ENST00000565119 GDF9O60383 454 aa12.94□□□□□ -0.34
CHD9-214ENST00000565119 ACTN4O43707 911 aaKnown RBP12.91□□□□□ -0.34
CHD9-214ENST00000565119 DNAJB2P25686 324 aa12.91□□□□□ -0.34
CHD9-214ENST00000565119 ST8SIA5O15466 376 aa12.89□□□□□ -0.35
CHD9-214ENST00000565119 LCE2AQ5TA79 106 aaPredicted RBP12.89□□□□□ -0.35
CHD9-214ENST00000565119 TMEM134Q9H6X4 195 aa12.89□□□□□ -0.35
CHD9-214ENST00000565119 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
CHD9-214ENST00000565119 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
CHD9-214ENST00000565119 AAASQ9NRG9 546 aa12.87□□□□□ -0.35
CHD9-214ENST00000565119 ADH1BP00325 375 aa12.86□□□□□ -0.35
CHD9-214ENST00000565119 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
CHD9-214ENST00000565119 CFHP08603 1231 aa12.85□□□□□ -0.35
CHD9-214ENST00000565119 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
CHD9-214ENST00000565119 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
CHD9-214ENST00000565119 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
CHD9-214ENST00000565119 PTGDRQ13258 359 aa12.83□□□□□ -0.36
CHD9-214ENST00000565119 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
CHD9-214ENST00000565119 SLC10A3P09131 477 aa12.82□□□□□ -0.36
CHD9-214ENST00000565119 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
CHD9-214ENST00000565119 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
CHD9-214ENST00000565119 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
CHD9-214ENST00000565119 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
CHD9-214ENST00000565119 NR1I2O75469 434 aa12.79□□□□□ -0.36
CHD9-214ENST00000565119 FOXC1Q12948 553 aa12.77□□□□□ -0.37
CHD9-214ENST00000565119 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
CHD9-214ENST00000565119 DACH1Q9UI36 760 aa12.77□□□□□ -0.37
CHD9-214ENST00000565119 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
CHD9-214ENST00000565119 SCUBE3Q8IX30 993 aa12.75□□□□□ -0.37
CHD9-214ENST00000565119 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
CHD9-214ENST00000565119 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
CHD9-214ENST00000565119 LMOD2Q6P5Q4 547 aa12.72□□□□□ -0.37
CHD9-214ENST00000565119 SPSB2Q99619 263 aa12.7□□□□□ -0.38
CHD9-214ENST00000565119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
CHD9-214ENST00000565119 AVPP01185 164 aa12.69□□□□□ -0.38
CHD9-214ENST00000565119 TOR4AQ9NXH8 423 aa12.69□□□□□ -0.38
CHD9-214ENST00000565119 GMPR2Q9P2T1 348 aaKnown RBP12.69□□□□□ -0.38
CHD9-214ENST00000565119 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
CHD9-214ENST00000565119 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
CHD9-214ENST00000565119 WFS1O76024 890 aa12.67□□□□□ -0.38
CHD9-214ENST00000565119 RPIAP49247 311 aa12.66□□□□□ -0.38
CHD9-214ENST00000565119 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
CHD9-214ENST00000565119 AXIN1O15169 862 aa12.64□□□□□ -0.39
CHD9-214ENST00000565119 PXYLP1Q8TE99 480 aa12.64□□□□□ -0.39
CHD9-214ENST00000565119 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
CHD9-214ENST00000565119 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
CHD9-214ENST00000565119 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
CHD9-214ENST00000565119 FCF1Q9Y324 198 aaKnown RBP12.62□□□□□ -0.39
CHD9-214ENST00000565119 FCHSD2O94868 740 aa12.6□□□□□ -0.39
CHD9-214ENST00000565119 CD2BP2O95400 341 aaKnown RBP12.6□□□□□ -0.39
CHD9-214ENST00000565119 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
CHD9-214ENST00000565119 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
CHD9-214ENST00000565119 SMCPP49901 116 aaPredicted RBP12.59□□□□□ -0.39
CHD9-214ENST00000565119 OATP04181 439 aa12.58□□□□□ -0.4
CHD9-214ENST00000565119 MORN1Q5T089 497 aa12.58□□□□□ -0.4
CHD9-214ENST00000565119 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
CHD9-214ENST00000565119 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
CHD9-214ENST00000565119 WIPF1O43516 503 aa12.57□□□□□ -0.4
CHD9-214ENST00000565119 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
CHD9-214ENST00000565119 LCE2CQ5TA81 110 aa12.55□□□□□ -0.4
CHD9-214ENST00000565119 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
CHD9-214ENST00000565119 PRDM9Q9NQV7 894 aa12.54□□□□□ -0.4
CHD9-214ENST00000565119 FUT2Q10981 343 aa12.53□□□□□ -0.4
CHD9-214ENST00000565119 SLC27A5Q9Y2P5 690 aa12.52□□□□□ -0.41
CHD9-214ENST00000565119 TTC24A2A3L6 582 aaPredicted RBP12.51□□□□□ -0.41
CHD9-214ENST00000565119 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
CHD9-214ENST00000565119 SNRPBP14678 240 aaKnown RBP12.5□□□□□ -0.41
CHD9-214ENST00000565119 INSM1Q01101 510 aaPredicted RBP12.5□□□□□ -0.41
CHD9-214ENST00000565119 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
CHD9-214ENST00000565119 SMPD1P17405 629 aa12.49□□□□□ -0.41
CHD9-214ENST00000565119 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
CHD9-214ENST00000565119 ATP13A2Q9NQ11 1180 aa12.48□□□□□ -0.41
CHD9-214ENST00000565119 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
CHD9-214ENST00000565119 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
CHD9-214ENST00000565119 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
CHD9-214ENST00000565119 WNT7AO00755 349 aa12.46□□□□□ -0.41
CHD9-214ENST00000565119 HIC1Q14526 733 aa12.46□□□□□ -0.41
CHD9-214ENST00000565119 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
CHD9-214ENST00000565119 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
CHD9-214ENST00000565119 TERTO14746 1132 aaKnown RBP12.45□□□□□ -0.42
CHD9-214ENST00000565119 SEMA3EO15041 775 aa12.45□□□□□ -0.42
CHD9-214ENST00000565119 NLRP7Q8WX94 980 aa12.45□□□□□ -0.42
CHD9-214ENST00000565119 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
CHD9-214ENST00000565119 FECHP22830 423 aa12.44□□□□□ -0.42
CHD9-214ENST00000565119 SNIP1Q8TAD8 396 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms