RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 TNRQ92752 1358 aa15.89■□□□□ 0.13
SNX29-204ENST00000564791 USP47Q96K76 1375 aa15.89■□□□□ 0.13
SNX29-204ENST00000564791 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
SNX29-204ENST00000564791 ADAMTSL3P82987 1691 aa15.89■□□□□ 0.13
SNX29-204ENST00000564791 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
SNX29-204ENST00000564791 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
SNX29-204ENST00000564791 ADGRF5Q8IZF2 1346 aa15.88■□□□□ 0.13
SNX29-204ENST00000564791 NBPF1Q3BBV0 1214 aa15.87■□□□□ 0.13
SNX29-204ENST00000564791 CEBPAP49715 358 aaPredicted RBP15.86■□□□□ 0.13
SNX29-204ENST00000564791 A2ML1A8K2U0 1454 aa15.86■□□□□ 0.13
SNX29-204ENST00000564791 KDM5AP29375 1690 aaKnown RBP15.84■□□□□ 0.13
SNX29-204ENST00000564791 IQGAP1P46940 1657 aa15.84■□□□□ 0.13
SNX29-204ENST00000564791 PIK3C2GO75747 1445 aa15.84■□□□□ 0.13
SNX29-204ENST00000564791 POLR1AO95602 1720 aaPredicted RBP15.84■□□□□ 0.13
SNX29-204ENST00000564791 UBR1Q8IWV7 1749 aa15.84■□□□□ 0.13
SNX29-204ENST00000564791 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.13
SNX29-204ENST00000564791 NUTM2DQ5VT03 806 aaPredicted RBP15.82■□□□□ 0.12
SNX29-204ENST00000564791 ZFYVE9O95405 1425 aa15.82■□□□□ 0.12
SNX29-204ENST00000564791 NLRP1Q9C000 1473 aa15.82■□□□□ 0.12
SNX29-204ENST00000564791 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
SNX29-204ENST00000564791 MYO3AQ8NEV4 1616 aa15.8■□□□□ 0.12
SNX29-204ENST00000564791 SETBP1Q9Y6X0 1596 aa15.8■□□□□ 0.12
SNX29-204ENST00000564791 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
SNX29-204ENST00000564791 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
SNX29-204ENST00000564791 RIMS2Q9UQ26 1411 aa15.8■□□□□ 0.12
SNX29-204ENST00000564791 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
SNX29-204ENST00000564791 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
SNX29-204ENST00000564791 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
SNX29-204ENST00000564791 ADGRB1O14514 1584 aa15.77■□□□□ 0.12
SNX29-204ENST00000564791 C11orf95C9JLR9 678 aaPredicted RBP15.77■□□□□ 0.12
SNX29-204ENST00000564791 C14orf93Q9H972 538 aaKnown RBP15.76■□□□□ 0.11
SNX29-204ENST00000564791 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
SNX29-204ENST00000564791 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
SNX29-204ENST00000564791 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
SNX29-204ENST00000564791 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
SNX29-204ENST00000564791 TMEM2Q9UHN6 1383 aa15.73■□□□□ 0.11
SNX29-204ENST00000564791 ALKQ9UM73 1620 aa15.73■□□□□ 0.11
SNX29-204ENST00000564791 SETD1AO15047 1707 aaKnown RBP15.73■□□□□ 0.11
SNX29-204ENST00000564791 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
SNX29-204ENST00000564791 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
SNX29-204ENST00000564791 ZNF142P52746 1687 aaPredicted RBP15.72■□□□□ 0.11
SNX29-204ENST00000564791 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
SNX29-204ENST00000564791 EIF3AQ14152 1382 aaKnown RBP15.72■□□□□ 0.11
SNX29-204ENST00000564791 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNX29-204ENST00000564791 PTPRMP28827 1452 aa15.71■□□□□ 0.11
SNX29-204ENST00000564791 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
SNX29-204ENST00000564791 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
SNX29-204ENST00000564791 TESK2Q96S53 571 aa15.7■□□□□ 0.1
SNX29-204ENST00000564791 ARHGEF28Q8N1W1 1705 aaKnown RBP15.7■□□□□ 0.1
SNX29-204ENST00000564791 SLIT1O75093 1534 aa15.7■□□□□ 0.1
SNX29-204ENST00000564791 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
SNX29-204ENST00000564791 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
SNX29-204ENST00000564791 DISP3Q9P2K9 1392 aa15.67■□□□□ 0.1
SNX29-204ENST00000564791 HDGFP51858 240 aaKnown RBP15.67■□□□□ 0.1
SNX29-204ENST00000564791 MIER1Q8N108 512 aa15.66■□□□□ 0.1
SNX29-204ENST00000564791 POLR3GLQ9BT43 218 aa15.65■□□□□ 0.1
SNX29-204ENST00000564791 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
SNX29-204ENST00000564791 LTKP29376 864 aa15.65■□□□□ 0.1
SNX29-204ENST00000564791 THEMISQ8N1K5 641 aaPredicted RBP15.65■□□□□ 0.1
SNX29-204ENST00000564791 YTHDC2Q9H6S0 1430 aaKnown RBP15.64■□□□□ 0.09
SNX29-204ENST00000564791 PLEKHG1Q9ULL1 1385 aa15.64■□□□□ 0.09
SNX29-204ENST00000564791 TMF1P82094 1093 aa15.63■□□□□ 0.09
SNX29-204ENST00000564791 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
SNX29-204ENST00000564791 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
SNX29-204ENST00000564791 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
SNX29-204ENST00000564791 SBNO2Q9Y2G9 1366 aa15.61■□□□□ 0.09
SNX29-204ENST00000564791 ADAMTS13Q76LX8 1427 aa15.61■□□□□ 0.09
SNX29-204ENST00000564791 STK26Q9P289 416 aa15.61■□□□□ 0.09
SNX29-204ENST00000564791 KNDC1Q76NI1 1749 aa15.6■□□□□ 0.09
SNX29-204ENST00000564791 METP08581 1390 aa15.6■□□□□ 0.09
SNX29-204ENST00000564791 BCANQ96GW7 911 aa15.6■□□□□ 0.09
SNX29-204ENST00000564791 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
SNX29-204ENST00000564791 LRPPRCP42704 1394 aaKnown RBP15.59■□□□□ 0.09
SNX29-204ENST00000564791 MYOM1P52179 1685 aa15.58■□□□□ 0.08
SNX29-204ENST00000564791 MED14O60244 1454 aa15.58■□□□□ 0.08
SNX29-204ENST00000564791 DIP2AQ14689 1571 aa15.57■□□□□ 0.08
SNX29-204ENST00000564791 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
SNX29-204ENST00000564791 ABCC11Q96J66 1382 aa15.56■□□□□ 0.08
SNX29-204ENST00000564791 CPS1P31327 1500 aa15.55■□□□□ 0.08
SNX29-204ENST00000564791 TULP4Q9NRJ4 1543 aa15.55■□□□□ 0.08
SNX29-204ENST00000564791 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
SNX29-204ENST00000564791 CDCA8Q53HL2 280 aa15.55■□□□□ 0.08
SNX29-204ENST00000564791 ANP32CO43423 234 aa15.54■□□□□ 0.08
SNX29-204ENST00000564791 TECPR2O15040 1411 aa15.54■□□□□ 0.08
SNX29-204ENST00000564791 SAFB2Q14151 953 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNX29-204ENST00000564791 PRAM1Q96QH2 718 aa15.54■□□□□ 0.08
SNX29-204ENST00000564791 SLC26A8Q96RN1 970 aa15.54■□□□□ 0.08
SNX29-204ENST00000564791 ANKLE2Q86XL3 938 aa15.52■□□□□ 0.08
SNX29-204ENST00000564791 POGKQ9P215 609 aa15.52■□□□□ 0.08
SNX29-204ENST00000564791 PTPRUQ92729 1446 aa15.51■□□□□ 0.07
SNX29-204ENST00000564791 TBX22Q9Y458 520 aa15.51■□□□□ 0.07
SNX29-204ENST00000564791 PLEKHH1Q9ULM0 1364 aa15.51■□□□□ 0.07
SNX29-204ENST00000564791 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
SNX29-204ENST00000564791 XRN1Q8IZH2 1706 aaKnown RBP15.5■□□□□ 0.07
SNX29-204ENST00000564791 FAM135BQ49AJ0 1406 aa15.49■□□□□ 0.07
SNX29-204ENST00000564791 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
SNX29-204ENST00000564791 WAPLQ7Z5K2 1190 aa15.49■□□□□ 0.07
SNX29-204ENST00000564791 ROBO2Q9HCK4 1378 aa15.48■□□□□ 0.07
SNX29-204ENST00000564791 NPHP4O75161 1426 aaPredicted RBP15.47■□□□□ 0.07
SNX29-204ENST00000564791 SIRT1Q96EB6 747 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms