RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 NRXN1Q9ULB1 1477 aa21.67■■□□□ 1.06
COMMD4-210ENST00000564587 PPLO60437 1756 aa21.66■■□□□ 1.06
COMMD4-210ENST00000564587 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
COMMD4-210ENST00000564587 NBPF1Q3BBV0 1214 aa21.65■■□□□ 1.06
COMMD4-210ENST00000564587 IDI1Q13907 227 aa21.64■■□□□ 1.05
COMMD4-210ENST00000564587 MLECQ14165 292 aa21.64■■□□□ 1.05
COMMD4-210ENST00000564587 VGFO15240 615 aaPredicted RBP21.63■■□□□ 1.05
COMMD4-210ENST00000564587 KIF7Q2M1P5 1343 aa21.62■■□□□ 1.05
COMMD4-210ENST00000564587 ST20-MTHFSA0A0A6YYL1 179 aa21.62■■□□□ 1.05
COMMD4-210ENST00000564587 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
COMMD4-210ENST00000564587 ZFYVE9O95405 1425 aa21.62■■□□□ 1.05
COMMD4-210ENST00000564587 ANP32CO43423 234 aa21.61■■□□□ 1.05
COMMD4-210ENST00000564587 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
COMMD4-210ENST00000564587 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
COMMD4-210ENST00000564587 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
COMMD4-210ENST00000564587 EIF3AQ14152 1382 aaKnown RBP21.6■■□□□ 1.05
COMMD4-210ENST00000564587 IQGAP1P46940 1657 aa21.59■■□□□ 1.05
COMMD4-210ENST00000564587 TMEM131LA2VDJ0 1609 aa21.58■■□□□ 1.05
COMMD4-210ENST00000564587 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
COMMD4-210ENST00000564587 SETBP1Q9Y6X0 1596 aa21.58■■□□□ 1.05
COMMD4-210ENST00000564587 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-210ENST00000564587 PIK3C2GO75747 1445 aa21.57■■□□□ 1.04
COMMD4-210ENST00000564587 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
COMMD4-210ENST00000564587 C14orf93Q9H972 538 aaKnown RBP21.55■■□□□ 1.04
COMMD4-210ENST00000564587 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
COMMD4-210ENST00000564587 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
COMMD4-210ENST00000564587 CFAP70Q5T0N1 1121 aa21.53■■□□□ 1.04
COMMD4-210ENST00000564587 TMF1P82094 1093 aa21.52■■□□□ 1.04
COMMD4-210ENST00000564587 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
COMMD4-210ENST00000564587 TNRQ92752 1358 aa21.5■■□□□ 1.03
COMMD4-210ENST00000564587 TESK2Q96S53 571 aa21.5■■□□□ 1.03
COMMD4-210ENST00000564587 MYO5BQ9ULV0 1848 aa21.5■■□□□ 1.03
COMMD4-210ENST00000564587 KDM5AP29375 1690 aaKnown RBP21.5■■□□□ 1.03
COMMD4-210ENST00000564587 HDGFP51858 240 aaKnown RBP21.48■■□□□ 1.03
COMMD4-210ENST00000564587 A2ML1A8K2U0 1454 aa21.47■■□□□ 1.03
COMMD4-210ENST00000564587 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
COMMD4-210ENST00000564587 FER1L4A9Z1Z3 1794 aa21.46■■□□□ 1.03
COMMD4-210ENST00000564587 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
COMMD4-210ENST00000564587 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
COMMD4-210ENST00000564587 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
COMMD4-210ENST00000564587 SBNO2Q9Y2G9 1366 aa21.44■■□□□ 1.02
COMMD4-210ENST00000564587 LMTK3Q96Q04 1460 aa21.44■■□□□ 1.02
COMMD4-210ENST00000564587 ADGRB1O14514 1584 aa21.44■■□□□ 1.02
COMMD4-210ENST00000564587 MYO3AQ8NEV4 1616 aa21.44■■□□□ 1.02
COMMD4-210ENST00000564587 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
COMMD4-210ENST00000564587 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
COMMD4-210ENST00000564587 C3P01024 1663 aa21.39■■□□□ 1.01
COMMD4-210ENST00000564587 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
COMMD4-210ENST00000564587 KTN1Q86UP2 1357 aaKnown RBP21.36■■□□□ 1.01
COMMD4-210ENST00000564587 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
COMMD4-210ENST00000564587 NUTM2DQ5VT03 806 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-210ENST00000564587 UBR1Q8IWV7 1749 aa21.35■■□□□ 1.01
COMMD4-210ENST00000564587 ALKQ9UM73 1620 aa21.33■■□□□ 1
COMMD4-210ENST00000564587 PUS7Q96PZ0 661 aaKnown RBP21.32■■□□□ 1
COMMD4-210ENST00000564587 TRAK1Q9UPV9 953 aa21.32■■□□□ 1
COMMD4-210ENST00000564587 TMEM2Q9UHN6 1383 aa21.32■■□□□ 1
COMMD4-210ENST00000564587 TMEM132EQ6IEE7 984 aa21.31■■□□□ 1
COMMD4-210ENST00000564587 QRICH2Q9H0J4 1663 aa21.29■■□□□ 1
COMMD4-210ENST00000564587 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
COMMD4-210ENST00000564587 ARHGEF28Q8N1W1 1705 aaKnown RBP21.29■■□□□ 1
COMMD4-210ENST00000564587 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
COMMD4-210ENST00000564587 CEBPAP49715 358 aaPredicted RBP21.28■■□□□ 1
COMMD4-210ENST00000564587 RALBP1Q15311 655 aa21.28■■□□□ 1
COMMD4-210ENST00000564587 YTHDC2Q9H6S0 1430 aaKnown RBP21.28■■□□□ 1
COMMD4-210ENST00000564587 ASXL1Q8IXJ9 1541 aa21.27■■□□□ 1
COMMD4-210ENST00000564587 ILDR2Q71H61 639 aa21.26■□□□□ 0.99
COMMD4-210ENST00000564587 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-210ENST00000564587 DLC1Q96QB1 1528 aa21.25■□□□□ 0.99
COMMD4-210ENST00000564587 RIMS1Q86UR5 1692 aaKnown RBP21.25■□□□□ 0.99
COMMD4-210ENST00000564587 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
COMMD4-210ENST00000564587 SLIT1O75093 1534 aa21.24■□□□□ 0.99
COMMD4-210ENST00000564587 LRPPRCP42704 1394 aaKnown RBP21.24■□□□□ 0.99
COMMD4-210ENST00000564587 SOCS7O14512 581 aa21.24■□□□□ 0.99
COMMD4-210ENST00000564587 PER1O15534 1290 aaPredicted RBP21.24■□□□□ 0.99
COMMD4-210ENST00000564587 PANK3Q9H999 370 aa21.24■□□□□ 0.99
COMMD4-210ENST00000564587 EVC2Q86UK5 1308 aa21.24■□□□□ 0.99
COMMD4-210ENST00000564587 ARHGAP23Q9P227 1491 aa21.23■□□□□ 0.99
COMMD4-210ENST00000564587 SETD1AO15047 1707 aaKnown RBP21.23■□□□□ 0.99
COMMD4-210ENST00000564587 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
COMMD4-210ENST00000564587 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
COMMD4-210ENST00000564587 SIRT1Q96EB6 747 aa21.21■□□□□ 0.99
COMMD4-210ENST00000564587 NRXN3Q9Y4C0 1643 aa21.21■□□□□ 0.99
COMMD4-210ENST00000564587 SETD1BQ9UPS6 1966 aaKnown RBP21.21■□□□□ 0.99
COMMD4-210ENST00000564587 PTPRMP28827 1452 aa21.2■□□□□ 0.98
COMMD4-210ENST00000564587 POGKQ9P215 609 aa21.19■□□□□ 0.98
COMMD4-210ENST00000564587 STK26Q9P289 416 aa21.19■□□□□ 0.98
COMMD4-210ENST00000564587 KNSTRNQ9Y448 316 aa21.19■□□□□ 0.98
COMMD4-210ENST00000564587 MYOM1P52179 1685 aa21.18■□□□□ 0.98
COMMD4-210ENST00000564587 TXNDC2Q86VQ3 553 aa21.18■□□□□ 0.98
COMMD4-210ENST00000564587 NPC1L1Q9UHC9 1359 aa21.18■□□□□ 0.98
COMMD4-210ENST00000564587 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
COMMD4-210ENST00000564587 MYBBP1AQ9BQG0 1328 aaKnown RBP21.17■□□□□ 0.98
COMMD4-210ENST00000564587 KNDC1Q76NI1 1749 aa21.16■□□□□ 0.98
COMMD4-210ENST00000564587 CEP170BQ9Y4F5 1589 aaPredicted RBP21.16■□□□□ 0.98
COMMD4-210ENST00000564587 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
COMMD4-210ENST00000564587 NINLQ9Y2I6 1382 aa21.16■□□□□ 0.98
COMMD4-210ENST00000564587 BCANQ96GW7 911 aa21.16■□□□□ 0.98
COMMD4-210ENST00000564587 TECPR2O15040 1411 aa21.15■□□□□ 0.98
COMMD4-210ENST00000564587 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
COMMD4-210ENST00000564587 FAM135BQ49AJ0 1406 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms