RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 KCNA6P17658 529 aa16.71■□□□□ 0.27
CFDP1-203ENST00000564286 IDI1Q13907 227 aa16.71■□□□□ 0.27
CFDP1-203ENST00000564286 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
CFDP1-203ENST00000564286 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
CFDP1-203ENST00000564286 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
CFDP1-203ENST00000564286 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
CFDP1-203ENST00000564286 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
CFDP1-203ENST00000564286 TMEM94Q12767 1356 aa16.69■□□□□ 0.26
CFDP1-203ENST00000564286 CFAP65Q6ZU64 1925 aaKnown RBP16.69■□□□□ 0.26
CFDP1-203ENST00000564286 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
CFDP1-203ENST00000564286 DAPK1P53355 1430 aa16.69■□□□□ 0.26
CFDP1-203ENST00000564286 EFCAB6Q5THR3 1501 aa16.67■□□□□ 0.26
CFDP1-203ENST00000564286 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
CFDP1-203ENST00000564286 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
CFDP1-203ENST00000564286 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
CFDP1-203ENST00000564286 RGS17Q9UGC6 210 aaPredicted RBP16.66■□□□□ 0.26
CFDP1-203ENST00000564286 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
CFDP1-203ENST00000564286 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
CFDP1-203ENST00000564286 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
CFDP1-203ENST00000564286 RBM33Q96EV2 1170 aaKnown RBP16.64■□□□□ 0.25
CFDP1-203ENST00000564286 LMTK2Q8IWU2 1503 aa16.64■□□□□ 0.25
CFDP1-203ENST00000564286 CROCC2H7BZ55 1655 aa16.63■□□□□ 0.25
CFDP1-203ENST00000564286 ABCB7O75027 752 aa16.63■□□□□ 0.25
CFDP1-203ENST00000564286 MSH6P52701 1360 aa16.63■□□□□ 0.25
CFDP1-203ENST00000564286 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
CFDP1-203ENST00000564286 KDM5AP29375 1690 aaKnown RBP16.61■□□□□ 0.25
CFDP1-203ENST00000564286 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
CFDP1-203ENST00000564286 NOS1P29475 1434 aa16.6■□□□□ 0.25
CFDP1-203ENST00000564286 FAM50AQ14320 339 aaKnown RBP16.59■□□□□ 0.25
CFDP1-203ENST00000564286 POTEAQ6S8J7 498 aa16.59■□□□□ 0.25
CFDP1-203ENST00000564286 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
CFDP1-203ENST00000564286 TET3O43151 1660 aa16.59■□□□□ 0.25
CFDP1-203ENST00000564286 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
CFDP1-203ENST00000564286 XIRP1Q702N8 1843 aaKnown RBP16.58■□□□□ 0.24
CFDP1-203ENST00000564286 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
CFDP1-203ENST00000564286 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
CFDP1-203ENST00000564286 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.56■□□□□ 0.24
CFDP1-203ENST00000564286 ROBO1Q9Y6N7 1651 aa16.56■□□□□ 0.24
CFDP1-203ENST00000564286 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
CFDP1-203ENST00000564286 PLEKHG1Q9ULL1 1385 aa16.55■□□□□ 0.24
CFDP1-203ENST00000564286 JCADQ9P266 1359 aa16.54■□□□□ 0.24
CFDP1-203ENST00000564286 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
CFDP1-203ENST00000564286 TBX22Q9Y458 520 aa16.53■□□□□ 0.24
CFDP1-203ENST00000564286 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
CFDP1-203ENST00000564286 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
CFDP1-203ENST00000564286 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
CFDP1-203ENST00000564286 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
CFDP1-203ENST00000564286 ATF3P18847 181 aa16.5■□□□□ 0.23
CFDP1-203ENST00000564286 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
CFDP1-203ENST00000564286 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
CFDP1-203ENST00000564286 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
CFDP1-203ENST00000564286 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
CFDP1-203ENST00000564286 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
CFDP1-203ENST00000564286 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
CFDP1-203ENST00000564286 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
CFDP1-203ENST00000564286 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.23
CFDP1-203ENST00000564286 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
CFDP1-203ENST00000564286 TMEM131LA2VDJ0 1609 aa16.43■□□□□ 0.22
CFDP1-203ENST00000564286 POLA2Q14181 598 aa16.42■□□□□ 0.22
CFDP1-203ENST00000564286 AMOTL2Q9Y2J4 779 aa16.42■□□□□ 0.22
CFDP1-203ENST00000564286 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
CFDP1-203ENST00000564286 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
CFDP1-203ENST00000564286 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
CFDP1-203ENST00000564286 ADAMTS13Q76LX8 1427 aa16.4■□□□□ 0.22
CFDP1-203ENST00000564286 NUP155O75694 1391 aa16.39■□□□□ 0.21
CFDP1-203ENST00000564286 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
CFDP1-203ENST00000564286 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
CFDP1-203ENST00000564286 COL16A1Q07092 1604 aaPredicted RBP16.38■□□□□ 0.21
CFDP1-203ENST00000564286 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
CFDP1-203ENST00000564286 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
CFDP1-203ENST00000564286 RXRBP28702 533 aa16.38■□□□□ 0.21
CFDP1-203ENST00000564286 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
CFDP1-203ENST00000564286 TRPM2O94759 1503 aa16.37■□□□□ 0.21
CFDP1-203ENST00000564286 ITGAEP38570 1179 aa16.37■□□□□ 0.21
CFDP1-203ENST00000564286 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
CFDP1-203ENST00000564286 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
CFDP1-203ENST00000564286 UNC13BO14795 1591 aa16.37■□□□□ 0.21
CFDP1-203ENST00000564286 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
CFDP1-203ENST00000564286 LRP6O75581 1613 aa16.36■□□□□ 0.21
CFDP1-203ENST00000564286 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
CFDP1-203ENST00000564286 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
CFDP1-203ENST00000564286 UPF1Q92900 1129 aaKnown RBP eCLIP16.35■□□□□ 0.21
CFDP1-203ENST00000564286 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.34■□□□□ 0.21
CFDP1-203ENST00000564286 DCCP43146 1447 aa16.34■□□□□ 0.21
CFDP1-203ENST00000564286 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.2
CFDP1-203ENST00000564286 E9PCH4 1651 aa16.33■□□□□ 0.2
CFDP1-203ENST00000564286 SETD1AO15047 1707 aaKnown RBP16.32■□□□□ 0.2
CFDP1-203ENST00000564286 PTPRUQ92729 1446 aa16.32■□□□□ 0.2
CFDP1-203ENST00000564286 IQGAP3Q86VI3 1631 aa16.31■□□□□ 0.2
CFDP1-203ENST00000564286 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
CFDP1-203ENST00000564286 AFF2P51816 1311 aa16.3■□□□□ 0.2
CFDP1-203ENST00000564286 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
CFDP1-203ENST00000564286 C8orf37Q96NL8 207 aa16.28■□□□□ 0.2
CFDP1-203ENST00000564286 ASXL1Q8IXJ9 1541 aa16.28■□□□□ 0.2
CFDP1-203ENST00000564286 MST1RQ04912 1400 aa16.27■□□□□ 0.19
CFDP1-203ENST00000564286 METP08581 1390 aa16.26■□□□□ 0.19
CFDP1-203ENST00000564286 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
CFDP1-203ENST00000564286 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
CFDP1-203ENST00000564286 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
CFDP1-203ENST00000564286 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms