RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 NBR1Q14596 966 aa14.96□□□□□ -0.01
TCF4-222ENST00000564228 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
TCF4-222ENST00000564228 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
TCF4-222ENST00000564228 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.02
TCF4-222ENST00000564228 FER1L4A9Z1Z3 1794 aa14.95□□□□□ -0.02
TCF4-222ENST00000564228 IPO9Q96P70 1041 aaKnown RBP14.94□□□□□ -0.02
TCF4-222ENST00000564228 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
TCF4-222ENST00000564228 SYNMO15061 1565 aa14.94□□□□□ -0.02
TCF4-222ENST00000564228 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
TCF4-222ENST00000564228 UBE2Q2Q8WVN8 375 aa14.93□□□□□ -0.02
TCF4-222ENST00000564228 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
TCF4-222ENST00000564228 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
TCF4-222ENST00000564228 DCAF11Q8TEB1 546 aa14.92□□□□□ -0.02
TCF4-222ENST00000564228 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
TCF4-222ENST00000564228 NOS1P29475 1434 aa14.92□□□□□ -0.02
TCF4-222ENST00000564228 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
TCF4-222ENST00000564228 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
TCF4-222ENST00000564228 NPM3O75607 178 aaKnown RBP14.92□□□□□ -0.02
TCF4-222ENST00000564228 FBXO31Q5XUX0 539 aaPredicted RBP14.92□□□□□ -0.02
TCF4-222ENST00000564228 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
TCF4-222ENST00000564228 SPATA31E1Q6ZUB1 1445 aa14.9□□□□□ -0.02
TCF4-222ENST00000564228 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
TCF4-222ENST00000564228 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
TCF4-222ENST00000564228 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
TCF4-222ENST00000564228 MYO5BQ9ULV0 1848 aa14.9□□□□□ -0.02
TCF4-222ENST00000564228 ZMYM3Q14202 1370 aa14.9□□□□□ -0.02
TCF4-222ENST00000564228 B4GALNT3Q6L9W6 998 aa14.9□□□□□ -0.02
TCF4-222ENST00000564228 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
TCF4-222ENST00000564228 C11orf95C9JLR9 678 aaPredicted RBP14.88□□□□□ -0.03
TCF4-222ENST00000564228 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
TCF4-222ENST00000564228 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
TCF4-222ENST00000564228 C3P01024 1663 aa14.87□□□□□ -0.03
TCF4-222ENST00000564228 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
TCF4-222ENST00000564228 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
TCF4-222ENST00000564228 POLR1AO95602 1720 aaPredicted RBP14.87□□□□□ -0.03
TCF4-222ENST00000564228 MADDQ8WXG6 1647 aa14.86□□□□□ -0.03
TCF4-222ENST00000564228 RIMS1Q86UR5 1692 aaKnown RBP14.86□□□□□ -0.03
TCF4-222ENST00000564228 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
TCF4-222ENST00000564228 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
TCF4-222ENST00000564228 IDI1Q13907 227 aa14.85□□□□□ -0.03
TCF4-222ENST00000564228 IL27Q8NEV9 243 aa14.84□□□□□ -0.03
TCF4-222ENST00000564228 SLC52A1Q9NWF4 448 aa14.84□□□□□ -0.03
TCF4-222ENST00000564228 PPLO60437 1756 aa14.84□□□□□ -0.03
TCF4-222ENST00000564228 CEBPAP49715 358 aaPredicted RBP14.84□□□□□ -0.03
TCF4-222ENST00000564228 UHRF1BP1Q6BDS2 1440 aa14.83□□□□□ -0.03
TCF4-222ENST00000564228 SMG6Q86US8 1419 aaKnown RBP14.83□□□□□ -0.03
TCF4-222ENST00000564228 ADAMTSL3P82987 1691 aa14.82□□□□□ -0.04
TCF4-222ENST00000564228 PRAG1Q86YV5 1406 aa14.82□□□□□ -0.04
TCF4-222ENST00000564228 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
TCF4-222ENST00000564228 RNF123Q5XPI4 1314 aa14.82□□□□□ -0.04
TCF4-222ENST00000564228 TRPM1Q7Z4N2 1603 aa14.82□□□□□ -0.04
TCF4-222ENST00000564228 CCDC136Q96JN2 1154 aa14.81□□□□□ -0.04
TCF4-222ENST00000564228 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
TCF4-222ENST00000564228 TNRQ92752 1358 aa14.8□□□□□ -0.04
TCF4-222ENST00000564228 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
TCF4-222ENST00000564228 MYOM2P54296 1465 aa14.77□□□□□ -0.04
TCF4-222ENST00000564228 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.04
TCF4-222ENST00000564228 NEXMIFQ5QGS0 1516 aa14.77□□□□□ -0.05
TCF4-222ENST00000564228 ROCK2O75116 1388 aaKnown RBP14.76□□□□□ -0.05
TCF4-222ENST00000564228 STAC3Q96MF2 364 aa14.76□□□□□ -0.05
TCF4-222ENST00000564228 ADGRF5Q8IZF2 1346 aa14.75□□□□□ -0.05
TCF4-222ENST00000564228 UBR1Q8IWV7 1749 aa14.75□□□□□ -0.05
TCF4-222ENST00000564228 CARD11Q9BXL7 1154 aa14.75□□□□□ -0.05
TCF4-222ENST00000564228 PRKRIP1Q9H875 184 aaPredicted RBP14.75□□□□□ -0.05
TCF4-222ENST00000564228 RPGRIP1LQ68CZ1 1315 aa14.75□□□□□ -0.05
TCF4-222ENST00000564228 EIF4G2P78344 907 aaKnown RBP eCLIP14.74□□□□□ -0.053e-7■■■■■ 40.1
TCF4-222ENST00000564228 A2ML1A8K2U0 1454 aa14.74□□□□□ -0.05
TCF4-222ENST00000564228 PPM1GO15355 546 aaPredicted RBP14.74□□□□□ -0.05
TCF4-222ENST00000564228 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
TCF4-222ENST00000564228 NBPF1Q3BBV0 1214 aa14.74□□□□□ -0.05
TCF4-222ENST00000564228 KIAA1210Q9ULL0 1709 aa14.73□□□□□ -0.05
TCF4-222ENST00000564228 MYO3AQ8NEV4 1616 aa14.73□□□□□ -0.05
TCF4-222ENST00000564228 KDM5AP29375 1690 aaKnown RBP14.73□□□□□ -0.05
TCF4-222ENST00000564228 NLRP1Q9C000 1473 aa14.72□□□□□ -0.05
TCF4-222ENST00000564228 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
TCF4-222ENST00000564228 MRS2Q9HD23 443 aa14.72□□□□□ -0.05
TCF4-222ENST00000564228 USP47Q96K76 1375 aa14.72□□□□□ -0.05
TCF4-222ENST00000564228 NRXN1Q9ULB1 1477 aa14.71□□□□□ -0.05
TCF4-222ENST00000564228 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
TCF4-222ENST00000564228 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
TCF4-222ENST00000564228 CCDC7Q96M83 1385 aa14.71□□□□□ -0.05
TCF4-222ENST00000564228 SETD1BQ9UPS6 1966 aaKnown RBP14.71□□□□□ -0.05
TCF4-222ENST00000564228 LAMC1P11047 1609 aa14.71□□□□□ -0.06
TCF4-222ENST00000564228 CFAP70Q5T0N1 1121 aa14.7□□□□□ -0.06
TCF4-222ENST00000564228 PIK3C2GO75747 1445 aa14.7□□□□□ -0.06
TCF4-222ENST00000564228 NEFMP07197 916 aa14.69□□□□□ -0.06
TCF4-222ENST00000564228 RIMS2Q9UQ26 1411 aa14.69□□□□□ -0.06
TCF4-222ENST00000564228 FAM9BQ8IZU0 186 aa14.68□□□□□ -0.06
TCF4-222ENST00000564228 PTPRMP28827 1452 aa14.68□□□□□ -0.06
TCF4-222ENST00000564228 GPRASP1Q5JY77 1395 aa14.68□□□□□ -0.06
TCF4-222ENST00000564228 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.68□□□□□ -0.06
TCF4-222ENST00000564228 IQGAP1P46940 1657 aa14.67□□□□□ -0.06
TCF4-222ENST00000564228 TCERG1O14776 1098 aaKnown RBP14.67□□□□□ -0.06
TCF4-222ENST00000564228 ZFYVE9O95405 1425 aa14.67□□□□□ -0.06
TCF4-222ENST00000564228 CEP170BQ9Y4F5 1589 aaPredicted RBP14.66□□□□□ -0.06
TCF4-222ENST00000564228 MS4A1P11836 297 aa14.65□□□□□ -0.06
TCF4-222ENST00000564228 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
TCF4-222ENST00000564228 ZNF142P52746 1687 aaPredicted RBP14.64□□□□□ -0.07
TCF4-222ENST00000564228 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
TCF4-222ENST00000564228 C14orf93Q9H972 538 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms